Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962133

Identifier: 157962133

GI number: 157962133

Start: 2809332

End: 2810114

Strand: Reverse

Name: 157962133

Synonym: Spea_2312

Alternate gene names: NA

Gene position: 2810114-2809332 (Counterclockwise)

Preceding gene: 157962134

Following gene: 157962132

Centisome position: 54.31

GC content: 35.38

Gene sequence:

>783_bases
ATGAAGTTACAAGAAATCGTTATTAATAATTTCATGCCTTATAAAGGTGAGCAAATTGTACAGTTTCCGCAACATGAAAC
ACAAAATGTTATGTTGCTTTATGGAGACAACATGCGCGGTAAAACCAGTTTTTTGAACTCTATTCGTTGGGGATTTTACG
GACTGGCGGTTGGTCGTCATTTGCGTACTATTCCACGTGTAAACTTAGTTAATATTGAAGCTGCAAGTGTTGATGATTGG
TCAATGTCAATTTTGCTTAAATTTACACACGAAGAAAAGAGCTATGAATTACGACGAAAAATAACCAAGAAAAGTCACGT
GTCAGTGCCTTCAATCGATAATGACTTTGAAGAGGTGATTGGTTTAAAAGTTGATGGTGAAGTGATTGCTGGAGATAAAA
TATTAAACCAGATTAACCAAGTTTCTCCTGAGGAGATCTCAAGATTCTTTTTATTCGACGGTGAGTTATTACAAGAGTAT
GAAAACTTATTATTGGATAAAAATGCCCAGGGCGAAAAAATAAAACTGCATATTGAACAAGCTTTAGGCGTGCCTTCGTT
AATTAATGGGCGTGCAGATTTCGCTGTTTTATTGCAAGAATCACGAAGAATACAAACGCGTGATGCAAATAATTCATCTG
AACTAAAAAGCTTAGCAACACGCCAAAGTGATTTAGATGTTAAAGAAGATACAGCCAAAGCTGACTTGAAATCGCTAAAA
GAACAGAAAAATGACGTTGAGCTTTTAGTCGATACAATTGACGAAAAATTAAAAAAACACTGA

Upstream 100 bases:

>100_bases
TTCAGCAAAAGCATCAGTTTGAAAAAGAAAGAAATAGCGTTAACGAAATTAAAAAAGTAGTTGAAGCGTCAATTTCAATG
CCACAAGGTGACCTATCAAT

Downstream 100 bases:

>100_bases
AGCCGCGCAAAGAAGTAAAGCAGAACTAGATGTTTTAACTGCAACTAAAAAAGCAACTGAAAACAATATCATTTACGATC
AAAATGAACGTCGTCAGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: ATPase Invovled In DNA Repair

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKLQEIVINNFMPYKGEQIVQFPQHETQNVMLLYGDNMRGKTSFLNSIRWGFYGLAVGRHLRTIPRVNLVNIEAASVDDW
SMSILLKFTHEEKSYELRRKITKKSHVSVPSIDNDFEEVIGLKVDGEVIAGDKILNQINQVSPEEISRFFLFDGELLQEY
ENLLLDKNAQGEKIKLHIEQALGVPSLINGRADFAVLLQESRRIQTRDANNSSELKSLATRQSDLDVKEDTAKADLKSLK
EQKNDVELLVDTIDEKLKKH

Sequences:

>Translated_260_residues
MKLQEIVINNFMPYKGEQIVQFPQHETQNVMLLYGDNMRGKTSFLNSIRWGFYGLAVGRHLRTIPRVNLVNIEAASVDDW
SMSILLKFTHEEKSYELRRKITKKSHVSVPSIDNDFEEVIGLKVDGEVIAGDKILNQINQVSPEEISRFFLFDGELLQEY
ENLLLDKNAQGEKIKLHIEQALGVPSLINGRADFAVLLQESRRIQTRDANNSSELKSLATRQSDLDVKEDTAKADLKSLK
EQKNDVELLVDTIDEKLKKH
>Mature_260_residues
MKLQEIVINNFMPYKGEQIVQFPQHETQNVMLLYGDNMRGKTSFLNSIRWGFYGLAVGRHLRTIPRVNLVNIEAASVDDW
SMSILLKFTHEEKSYELRRKITKKSHVSVPSIDNDFEEVIGLKVDGEVIAGDKILNQINQVSPEEISRFFLFDGELLQEY
ENLLLDKNAQGEKIKLHIEQALGVPSLINGRADFAVLLQESRRIQTRDANNSSELKSLATRQSDLDVKEDTAKADLKSLK
EQKNDVELLVDTIDEKLKKH

Specific function: Unknown

COG id: COG0419

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29765; Mature: 29765

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQEIVINNFMPYKGEQIVQFPQHETQNVMLLYGDNMRGKTSFLNSIRWGFYGLAVGRH
CCHHHHHHHCCCCCCCCHHEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LRTIPRVNLVNIEAASVDDWSMSILLKFTHEEKSYELRRKITKKSHVSVPSIDNDFEEVI
HHHCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
GLKVDGEVIAGDKILNQINQVSPEEISRFFLFDGELLQEYENLLLDKNAQGEKIKLHIEQ
CCCCCCCEEEHHHHHHHHHCCCHHHHHHHHEECCHHHHHHHHHHCCCCCCCCEEEEEEHH
ALGVPSLINGRADFAVLLQESRRIQTRDANNSSELKSLATRQSDLDVKEDTAKADLKSLK
HCCCCHHHCCCCHHHHHHHHHCCEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EQKNDVELLVDTIDEKLKKH
HCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLQEIVINNFMPYKGEQIVQFPQHETQNVMLLYGDNMRGKTSFLNSIRWGFYGLAVGRH
CCHHHHHHHCCCCCCCCHHEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
LRTIPRVNLVNIEAASVDDWSMSILLKFTHEEKSYELRRKITKKSHVSVPSIDNDFEEVI
HHHCCCCEEEEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
GLKVDGEVIAGDKILNQINQVSPEEISRFFLFDGELLQEYENLLLDKNAQGEKIKLHIEQ
CCCCCCCEEEHHHHHHHHHCCCHHHHHHHHEECCHHHHHHHHHHCCCCCCCCEEEEEEHH
ALGVPSLINGRADFAVLLQESRRIQTRDANNSSELKSLATRQSDLDVKEDTAKADLKSLK
HCCCCHHHCCCCHHHHHHHHHCCEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
EQKNDVELLVDTIDEKLKKH
HCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA