| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ytmA [H]
Identifier: 157962098
GI number: 157962098
Start: 2757455
End: 2758465
Strand: Reverse
Name: ytmA [H]
Synonym: Spea_2277
Alternate gene names: 157962098
Gene position: 2758465-2757455 (Counterclockwise)
Preceding gene: 157962099
Following gene: 157962096
Centisome position: 53.31
GC content: 36.99
Gene sequence:
>1011_bases GTGACCAAAAATCTGTTAATCATCCTTTTAGTTATTTTTTCATTTAGTTCTCAAGCAACCAATTTGATCAATGATGAACG CGTTACTGAGCAAAAAAACTGTTTTACTTGGATTTTCACTGATTATGATTCATGGCGTAATGGCATGGAGAAAAAATTTA AAAGGAAAATAAACTCTGAGGAAAAGCTTAAACAAACTTTAGCTCGTTTTGATTCGCGCTTTGGTAAGGAAAAGTTTGAT CTTTATAAGACTAATTTATCCTGCTCTACTTTTGAATACCTTGTAGATGGCAATGTCGTAAAGGGCTATATCATAAAGCC AAAAGTATCTACAGAGAAGTTGCCAGTACTGATTTATAATCGTGGCGGTAACGGCAACTTTGGTGGTGTTGTTTTCGGCT CAATGATGAATAACTTGTTTCCTATTGCTAACGAAGGATTTGTGATTATTGGTAGCCAATATCGTGGGACTTTTAATAGT CAGTCAACTGCCCATGATGAATTTGGAGGAAGTGATATCAATGATGTCATCGCCTTAATGGATTTCATCCCTAGTATTGA AGGAGCTGATGCGCAACGTATTGGCATGTACGGCGCAAGTCGTGGTGGAATGCAAACTCATTTAGCAGTGAAAAAAGTCA ATAATATAAAAGCCATAGCAACTATTTCAAGTAATTCCGATCTGCAAAAAGGGCTAACTTACCGCCCTGAAATGGAAAAA GTATATTTGCACCGAATTCCAAACTACGAGCAGAATAAAGTCGCAGAACTACAAAAACGGTCGGTATTAAACTGGGTCAG TGAATTATCTCCCACCATGCCTATCTTACTTATACACGGTACTAATGATAAACGCGTCTCTGTTAAGCACTCAATGGACC TCGCCGACGCGTTATCAACCAACAACATACCTCATAAGCTAGTGATATATCCTGAAGATAATCATTTCTTGGATAAGAAT AAAGAAACAGCTGAAAAAGAACTGGTTAATTGGTTTAAAGACTATCTATAA
Upstream 100 bases:
>100_bases GTCTGTGGCAAGTTTCTAAAACTCTTCGAAAAAATTTTTGCGGCTTTGTTTAAATAATATCGTATCAATACCAACCTTTA ATCACCGACATGGAGTTCAT
Downstream 100 bases:
>100_bases CAAGTCACTGAAATGCATATACTCAGAATGGAGTCGACATGAAAAAAAATGCTTTATCAAAATCCAGCCATTATTTTATT GGATCGATGATTATGCTTTT
Product: peptidase S15
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MTKNLLIILLVIFSFSSQATNLINDERVTEQKNCFTWIFTDYDSWRNGMEKKFKRKINSEEKLKQTLARFDSRFGKEKFD LYKTNLSCSTFEYLVDGNVVKGYIIKPKVSTEKLPVLIYNRGGNGNFGGVVFGSMMNNLFPIANEGFVIIGSQYRGTFNS QSTAHDEFGGSDINDVIALMDFIPSIEGADAQRIGMYGASRGGMQTHLAVKKVNNIKAIATISSNSDLQKGLTYRPEMEK VYLHRIPNYEQNKVAELQKRSVLNWVSELSPTMPILLIHGTNDKRVSVKHSMDLADALSTNNIPHKLVIYPEDNHFLDKN KETAEKELVNWFKDYL
Sequences:
>Translated_336_residues MTKNLLIILLVIFSFSSQATNLINDERVTEQKNCFTWIFTDYDSWRNGMEKKFKRKINSEEKLKQTLARFDSRFGKEKFD LYKTNLSCSTFEYLVDGNVVKGYIIKPKVSTEKLPVLIYNRGGNGNFGGVVFGSMMNNLFPIANEGFVIIGSQYRGTFNS QSTAHDEFGGSDINDVIALMDFIPSIEGADAQRIGMYGASRGGMQTHLAVKKVNNIKAIATISSNSDLQKGLTYRPEMEK VYLHRIPNYEQNKVAELQKRSVLNWVSELSPTMPILLIHGTNDKRVSVKHSMDLADALSTNNIPHKLVIYPEDNHFLDKN KETAEKELVNWFKDYL >Mature_335_residues TKNLLIILLVIFSFSSQATNLINDERVTEQKNCFTWIFTDYDSWRNGMEKKFKRKINSEEKLKQTLARFDSRFGKEKFDL YKTNLSCSTFEYLVDGNVVKGYIIKPKVSTEKLPVLIYNRGGNGNFGGVVFGSMMNNLFPIANEGFVIIGSQYRGTFNSQ STAHDEFGGSDINDVIALMDFIPSIEGADAQRIGMYGASRGGMQTHLAVKKVNNIKAIATISSNSDLQKGLTYRPEMEKV YLHRIPNYEQNKVAELQKRSVLNWVSELSPTMPILLIHGTNDKRVSVKHSMDLADALSTNNIPHKLVIYPEDNHFLDKNK ETAEKELVNWFKDYL
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002471 - InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 38208; Mature: 38077
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNLLIILLVIFSFSSQATNLINDERVTEQKNCFTWIFTDYDSWRNGMEKKFKRKINSE CCCHHHHHHHHHHHCCCHHHHHHCHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCH EKLKQTLARFDSRFGKEKFDLYKTNLSCSTFEYLVDGNVVKGYIIKPKVSTEKLPVLIYN HHHHHHHHHHHHHHCCHHHHHEECCCCHHHHHHEECCCEEEEEEECCCCCCCCCCEEEEE RGGNGNFGGVVFGSMMNNLFPIANEGFVIIGSQYRGTFNSQSTAHDEFGGSDINDVIALM CCCCCCCCCEEHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH DFIPSIEGADAQRIGMYGASRGGMQTHLAVKKVNNIKAIATISSNSDLQKGLTYRPEMEK HHHCCCCCCCCHHEECCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHCCCCCCCHHH VYLHRIPNYEQNKVAELQKRSVLNWVSELSPTMPILLIHGTNDKRVSVKHSMDLADALST HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHC NNIPHKLVIYPEDNHFLDKNKETAEKELVNWFKDYL CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure TKNLLIILLVIFSFSSQATNLINDERVTEQKNCFTWIFTDYDSWRNGMEKKFKRKINSE CCHHHHHHHHHHHCCCHHHHHHCHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCH EKLKQTLARFDSRFGKEKFDLYKTNLSCSTFEYLVDGNVVKGYIIKPKVSTEKLPVLIYN HHHHHHHHHHHHHHCCHHHHHEECCCCHHHHHHEECCCEEEEEEECCCCCCCCCCEEEEE RGGNGNFGGVVFGSMMNNLFPIANEGFVIIGSQYRGTFNSQSTAHDEFGGSDINDVIALM CCCCCCCCCEEHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH DFIPSIEGADAQRIGMYGASRGGMQTHLAVKKVNNIKAIATISSNSDLQKGLTYRPEMEK HHHCCCCCCCCHHEECCCCCCCCCHHHHHHHHHCCEEEEEEECCCCHHHHCCCCCCCHHH VYLHRIPNYEQNKVAELQKRSVLNWVSELSPTMPILLIHGTNDKRVSVKHSMDLADALST HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHC NNIPHKLVIYPEDNHFLDKNKETAEKELVNWFKDYL CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]