| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is bax [H]
Identifier: 157962047
GI number: 157962047
Start: 2697674
End: 2698501
Strand: Reverse
Name: bax [H]
Synonym: Spea_2226
Alternate gene names: 157962047
Gene position: 2698501-2697674 (Counterclockwise)
Preceding gene: 157962049
Following gene: 157962046
Centisome position: 52.15
GC content: 41.06
Gene sequence:
>828_bases GTGAAAACAGGTAAAGTTGGGTTGTTTACTATCGCGTTAGGGTTAGTCATTGCACTGCTCCTACTTATCAGACTGGTGTT CATTCCAGCAAATGAAGAACAAGCGCCTGTATTAGGTAAAGCCGTTAAAAACGGTGAAGTGGCCAGTGTTGTACCTGATT TTGCTGCAATAACCGATGTGAGTGAAAAGAAACGCGAATTTTTCGCTTTTTTACGGCCGTCTATTAAACACCAAAACGCG ATTATTCAAGATGAAAGAGACTTTTTAATTGCGACGCGTAATCAGATTATTAATGGCAAATCTCTTACCGAGGCCGATGA GTTTAGATTACAGCAAATATCTGAAAAGTATCAATATACCCTTAGAAGCCTTACTATTAAGCATATCGACACACTATTAG TCAGAGTCGATGTCATACCCGAAGAAATGGTGCTAATTCAAGCTGCGAACGAAACAGGTTGGGGGAGCTCTCGCTTTGCC CGTGAAGGTCTAAACTTTTTCGGTCAATGGTGTTTTAGAAAAGGCTGTGGCTTAGTACCTCAATCGCGAACAGAAGGTTT ATCTCATGAGGTCGCACTATTTAAAACAGTAGAAGACTCAGTTGCTTCATACATGCGCAATCTCAATTCGAATGCCGCAT ACTCTTTACTGAGATCGATAAGAGCAGACCTACGCGCAGAGAACAAGACGCCTAGAGCTGAAGATCTCGTTTACGGATTG ATCAACTATTCAGAACGCCAAGAAGCTTATATCGATGAGCTACTTGAAATGTTACGCCAAAACCAACGATTTTTAGTGGA TAATAATGAAAAAACAACTGCTGCTTAG
Upstream 100 bases:
>100_bases TATTGAAATTTTTCGCGATGTATTATCGGGTAAAGCTAGCATATAATAGCCAACAGATTAACTAACTGTGAATTCCATGT AATTCTAGAAAGGAAAATGA
Downstream 100 bases:
>100_bases CTGTATCTTATTAAGTGTTTCGACGGTAAGTCAGGCTCAGCCAATCTCACTTGAATACCAGAGTTTTTATCAGCGCCTCA AGCAGGTAAACAAGGGTAAT
Product: Bax protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKTGKVGLFTIALGLVIALLLLIRLVFIPANEEQAPVLGKAVKNGEVASVVPDFAAITDVSEKKREFFAFLRPSIKHQNA IIQDERDFLIATRNQIINGKSLTEADEFRLQQISEKYQYTLRSLTIKHIDTLLVRVDVIPEEMVLIQAANETGWGSSRFA REGLNFFGQWCFRKGCGLVPQSRTEGLSHEVALFKTVEDSVASYMRNLNSNAAYSLLRSIRADLRAENKTPRAEDLVYGL INYSERQEAYIDELLEMLRQNQRFLVDNNEKTTAA
Sequences:
>Translated_275_residues MKTGKVGLFTIALGLVIALLLLIRLVFIPANEEQAPVLGKAVKNGEVASVVPDFAAITDVSEKKREFFAFLRPSIKHQNA IIQDERDFLIATRNQIINGKSLTEADEFRLQQISEKYQYTLRSLTIKHIDTLLVRVDVIPEEMVLIQAANETGWGSSRFA REGLNFFGQWCFRKGCGLVPQSRTEGLSHEVALFKTVEDSVASYMRNLNSNAAYSLLRSIRADLRAENKTPRAEDLVYGL INYSERQEAYIDELLEMLRQNQRFLVDNNEKTTAA >Mature_275_residues MKTGKVGLFTIALGLVIALLLLIRLVFIPANEEQAPVLGKAVKNGEVASVVPDFAAITDVSEKKREFFAFLRPSIKHQNA IIQDERDFLIATRNQIINGKSLTEADEFRLQQISEKYQYTLRSLTIKHIDTLLVRVDVIPEEMVLIQAANETGWGSSRFA REGLNFFGQWCFRKGCGLVPQSRTEGLSHEVALFKTVEDSVASYMRNLNSNAAYSLLRSIRADLRAENKTPRAEDLVYGL INYSERQEAYIDELLEMLRQNQRFLVDNNEKTTAA
Specific function: Unknown
COG id: COG2992
COG function: function code R; Uncharacterized FlgJ-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994948, Length=225, Percent_Identity=34.2222222222222, Blast_Score=134, Evalue=9e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: NA
Molecular weight: Translated: 31101; Mature: 31101
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGKVGLFTIALGLVIALLLLIRLVFIPANEEQAPVLGKAVKNGEVASVVPDFAAITDV CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHCCCHHHHHHH SEKKREFFAFLRPSIKHQNAIIQDERDFLIATRNQIINGKSLTEADEFRLQQISEKYQYT HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LRSLTIKHIDTLLVRVDVIPEEMVLIQAANETGWGSSRFAREGLNFFGQWCFRKGCGLVP HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC QSRTEGLSHEVALFKTVEDSVASYMRNLNSNAAYSLLRSIRADLRAENKTPRAEDLVYGL CHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH INYSERQEAYIDELLEMLRQNQRFLVDNNEKTTAA HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC >Mature Secondary Structure MKTGKVGLFTIALGLVIALLLLIRLVFIPANEEQAPVLGKAVKNGEVASVVPDFAAITDV CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHCCCHHHHHHH SEKKREFFAFLRPSIKHQNAIIQDERDFLIATRNQIINGKSLTEADEFRLQQISEKYQYT HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LRSLTIKHIDTLLVRVDVIPEEMVLIQAANETGWGSSRFAREGLNFFGQWCFRKGCGLVP HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC QSRTEGLSHEVALFKTVEDSVASYMRNLNSNAAYSLLRSIRADLRAENKTPRAEDLVYGL CHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH INYSERQEAYIDELLEMLRQNQRFLVDNNEKTTAA HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 1544897 [H]