| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is smtA [H]
Identifier: 157962006
GI number: 157962006
Start: 2648813
End: 2649628
Strand: Reverse
Name: smtA [H]
Synonym: Spea_2185
Alternate gene names: 157962006
Gene position: 2649628-2648813 (Counterclockwise)
Preceding gene: 157962008
Following gene: 157962003
Centisome position: 51.2
GC content: 41.79
Gene sequence:
>816_bases ATGAAGAAGACAGTGAAACAAGATAGAAATTTTGACGATTTAGCACATAAGTTTGCCGCGAGTATTTATGGCACCGCAAA AGGTGAAATAAGACAAACTGTGGTATGGCACGATATTGAACAGATTTTGTTTCGGTTAGCTGCTGATGCAGATCTGCGGG GCAAACAAGAAGACCAGCCTTTTAGCGTACTCGATGCTGGTGGCGGCTTAGCGCAATTGTCGCAAAAGATTGCTGCACTT GGGCACAATGTTAGTCTTTGCGATCTATCTAGTGAAATGCTATCGCTTGCTGAACAAGACATTAGTGCCAATCAGCTATT AGACAAATATCGATTTATTCATAGTCCAGTGCAGAATATAGCTGAGCACCTTAATGAACCCGTCGATTTAGTGTTGTTTC ATGCAGTAATGGAATGGTTAGCAGAGCCGATTAGCGCATTGACTTCACTCTGTGAGCAGGTAAAGCCCGGAGGGATTATC TCAGTGATGTTCTATAACTATAACGGCCTACTATTTAAAAATTTAATCTGCGGTAACCTTAAGCATATAGAACAAGGGAT GCCCCATCGTAAACGTTTTAAACTTCAGCCACAGCAAGGTATAGAGCCCGATCTAGTCTATCGCTGTTTAGAGCAAGCAG GTTTTGAGATCTTAGGCAAAACAGGGGTTAGAACATTTCATGATTATATGCAAAATCATGATATGGGCGATTTTAGCTTC GAGCAGATCTTAGCGATGGAACAAAAGCTGTGTAGACAAGAGCCGTTTTTGTCTCTAGGTCGCTACATTCATGTTTATGC GCAGAAAAAGGCATAG
Upstream 100 bases:
>100_bases GGTTCACAGTGGTTATTTGTTGCTGCACTGATTTGATTTTTTGGCTTGCTGTGAGAGAATTCGCGCCCGCGTAATTTCGC CAACAGATAACGTTCAACGT
Downstream 100 bases:
>100_bases TATTGGTAGCATTGAATTATCTAAATGAATAGTTCATTAAAATGCGGTTAATTAATCCATATTTAACATTCGTTTGCTAA GCTGTAACCGTTTAAAAGAA
Product: putative metallothionein SmtA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKKTVKQDRNFDDLAHKFAASIYGTAKGEIRQTVVWHDIEQILFRLAADADLRGKQEDQPFSVLDAGGGLAQLSQKIAAL GHNVSLCDLSSEMLSLAEQDISANQLLDKYRFIHSPVQNIAEHLNEPVDLVLFHAVMEWLAEPISALTSLCEQVKPGGII SVMFYNYNGLLFKNLICGNLKHIEQGMPHRKRFKLQPQQGIEPDLVYRCLEQAGFEILGKTGVRTFHDYMQNHDMGDFSF EQILAMEQKLCRQEPFLSLGRYIHVYAQKKA
Sequences:
>Translated_271_residues MKKTVKQDRNFDDLAHKFAASIYGTAKGEIRQTVVWHDIEQILFRLAADADLRGKQEDQPFSVLDAGGGLAQLSQKIAAL GHNVSLCDLSSEMLSLAEQDISANQLLDKYRFIHSPVQNIAEHLNEPVDLVLFHAVMEWLAEPISALTSLCEQVKPGGII SVMFYNYNGLLFKNLICGNLKHIEQGMPHRKRFKLQPQQGIEPDLVYRCLEQAGFEILGKTGVRTFHDYMQNHDMGDFSF EQILAMEQKLCRQEPFLSLGRYIHVYAQKKA >Mature_271_residues MKKTVKQDRNFDDLAHKFAASIYGTAKGEIRQTVVWHDIEQILFRLAADADLRGKQEDQPFSVLDAGGGLAQLSQKIAAL GHNVSLCDLSSEMLSLAEQDISANQLLDKYRFIHSPVQNIAEHLNEPVDLVLFHAVMEWLAEPISALTSLCEQVKPGGII SVMFYNYNGLLFKNLICGNLKHIEQGMPHRKRFKLQPQQGIEPDLVYRCLEQAGFEILGKTGVRTFHDYMQNHDMGDFSF EQILAMEQKLCRQEPFLSLGRYIHVYAQKKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787151, Length=263, Percent_Identity=46.7680608365019, Blast_Score=270, Evalue=7e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 30748; Mature: 30748
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTVKQDRNFDDLAHKFAASIYGTAKGEIRQTVVWHDIEQILFRLAADADLRGKQEDQP CCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC FSVLDAGGGLAQLSQKIAALGHNVSLCDLSSEMLSLAEQDISANQLLDKYRFIHSPVQNI CEEHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AEHLNEPVDLVLFHAVMEWLAEPISALTSLCEQVKPGGIISVMFYNYNGLLFKNLICGNL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCH KHIEQGMPHRKRFKLQPQQGIEPDLVYRCLEQAGFEILGKTGVRTFHDYMQNHDMGDFSF HHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHH EQILAMEQKLCRQEPFLSLGRYIHVYAQKKA HHHHHHHHHHHHHCHHHHHHHHEEEEEECCC >Mature Secondary Structure MKKTVKQDRNFDDLAHKFAASIYGTAKGEIRQTVVWHDIEQILFRLAADADLRGKQEDQP CCCCHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC FSVLDAGGGLAQLSQKIAALGHNVSLCDLSSEMLSLAEQDISANQLLDKYRFIHSPVQNI CEEHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AEHLNEPVDLVLFHAVMEWLAEPISALTSLCEQVKPGGIISVMFYNYNGLLFKNLICGNL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCH KHIEQGMPHRKRFKLQPQQGIEPDLVYRCLEQAGFEILGKTGVRTFHDYMQNHDMGDFSF HHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHHH EQILAMEQKLCRQEPFLSLGRYIHVYAQKKA HHHHHHHHHHHHHCHHHHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7513784; 8905232; 9278503; 8566713 [H]