| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961990
Identifier: 157961990
GI number: 157961990
Start: 2626222
End: 2626707
Strand: Direct
Name: 157961990
Synonym: Spea_2169
Alternate gene names: NA
Gene position: 2626222-2626707 (Clockwise)
Preceding gene: 157961989
Following gene: 157961991
Centisome position: 50.75
GC content: 46.09
Gene sequence:
>486_bases ATGGCTAATATTGAAATATTAACTGCAGAGCAATTACTAGACTCAGCAAGCCTAGATCTGGGGCATTCCGATTGGTTAAC CATTTCTCAAGAAAGAATAAACCTTTTTGCCGAAGCTACCGGCGACCATCAATGGATCCATGTTGATCCAGAGCGGGCCG CGACGGGTCCTTTTGGTGCTTGTATCGCTCATGGTTACCTTAGTCTTTCTCTAGTGAATTTGTTTCTACCGCAACTCGTT GAAATAAGAAACATCAGTATGGGCGTTAACTACGGCTGCGATAAAGTGCGCTTTCCCGCTGTAGTACCGGTTGGTAGCAA GGTCCGCGGCCAAGGAAAAATTATTCATAGCGTAAATAAAGGCGCGTTTATCCAAGCCACCATTCGCGTCACCATTGAGA TCCAAGGTTCTGACCGCCCAGCCTGTGTGGTTGACACCATCAGTTGCTACACCTTTGATACGCCAACGACAAACTCTAAT AACTAA
Upstream 100 bases:
>100_bases AAGTGGCAAATGTCATGATGTTTCTCGCCAGCGATTACTCATCTTATATGGCGGGTGAAGTGGTTTCTGTCAGTTCGCAA CAGGCTTAGGAGGTGTTCTC
Downstream 100 bases:
>100_bases AGGAATTATAAGATGACAGAAGCAGTGATCGTCTCCGTTGCACGTACCGCATTAAGCAAATCTTTTCGTGGCGCATTTAA TGATACTGAAGCCCCGGTTC
Product: dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MANIEILTAEQLLDSASLDLGHSDWLTISQERINLFAEATGDHQWIHVDPERAATGPFGACIAHGYLSLSLVNLFLPQLV EIRNISMGVNYGCDKVRFPAVVPVGSKVRGQGKIIHSVNKGAFIQATIRVTIEIQGSDRPACVVDTISCYTFDTPTTNSN N
Sequences:
>Translated_161_residues MANIEILTAEQLLDSASLDLGHSDWLTISQERINLFAEATGDHQWIHVDPERAATGPFGACIAHGYLSLSLVNLFLPQLV EIRNISMGVNYGCDKVRFPAVVPVGSKVRGQGKIIHSVNKGAFIQATIRVTIEIQGSDRPACVVDTISCYTFDTPTTNSN N >Mature_160_residues ANIEILTAEQLLDSASLDLGHSDWLTISQERINLFAEATGDHQWIHVDPERAATGPFGACIAHGYLSLSLVNLFLPQLVE IRNISMGVNYGCDKVRFPAVVPVGSKVRGQGKIIHSVNKGAFIQATIRVTIEIQGSDRPACVVDTISCYTFDTPTTNSNN
Specific function: May be involved in the hydration of fatty acids for production of polyhydroxylalkanoates [H]
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002539 [H]
Pfam domain/function: PF01575 MaoC_dehydratas [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 17496; Mature: 17365
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANIEILTAEQLLDSASLDLGHSDWLTISQERINLFAEATGDHQWIHVDPERAATGPFGA CCCEEEEEHHHHHCCCCCCCCCCCCEEEEHHHEEEEEECCCCCEEEEECCHHCCCCCHHH CIAHGYLSLSLVNLFLPQLVEIRNISMGVNYGCDKVRFPAVVPVGSKVRGQGKIIHSVNK HHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCEECCEEECCCCCCCCCCEEEEECCC GAFIQATIRVTIEIQGSDRPACVVDTISCYTFDTPTTNSNN CEEEEEEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCC >Mature Secondary Structure ANIEILTAEQLLDSASLDLGHSDWLTISQERINLFAEATGDHQWIHVDPERAATGPFGA CCEEEEEHHHHHCCCCCCCCCCCCEEEEHHHEEEEEECCCCCEEEEECCHHCCCCCHHH CIAHGYLSLSLVNLFLPQLVEIRNISMGVNYGCDKVRFPAVVPVGSKVRGQGKIIHSVNK HHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCEECCEEECCCCCCCCCCEEEEECCC GAFIQATIRVTIEIQGSDRPACVVDTISCYTFDTPTTNSNN CEEEEEEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]