| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961956
Identifier: 157961956
GI number: 157961956
Start: 2586740
End: 2587933
Strand: Direct
Name: 157961956
Synonym: Spea_2135
Alternate gene names: NA
Gene position: 2586740-2587933 (Clockwise)
Preceding gene: 157961955
Following gene: 157961958
Centisome position: 49.99
GC content: 42.88
Gene sequence:
>1194_bases TTGCCTAATATTGACCTAGAAATTGAATACTACAATGACCTTGTTGAATCTATTTATGACGCTGCACAAAATAATTCCAG TTGGTCTGAGCCTTTAGAGGAACTGAGAAAGTTATTTGGCGCAAATTATGTCACTTTAATACTCAAACAACCCCTGCCTG ATGATGAACAAGGCATAGGCCTAATGGTCGCGGTTGGCGGTAATATAGATGATGAGAGTAAAATCCAGTATTTGCCCTAC GGCCATACGTTAACGCCCTTTAATGACCAAGAACCGAATACGATTGTAACGGTTGATGATCTTATGGACGAACAGCAGTG GATTGAGAGTTCCTATCGGCGTCATTGGTGCATGCACAATGATGTTTATCATGTGATGGCGGTTGATATCTCAATTCCTG ATGTCGGTAATCTGCCTTTTAGGATCACTCGCGGAGAAGCCGATACCGCATTTAGTGCAGAAGATAAAGCATTATGCCAG TTTTTTGTTTCTCACCTTAGACGCGCGCTCGGGATCCACTTGCAACTCAATCGAAGTGAATCATTGGGCTCAATGTACTC TCAGGCCATCGGCCGTTTATCCATTGCCACCATTAAAATTGATGAGCAAGGTAAAGTATTAGATCAAAATATCTTTGCAC GAGAAATTATCGATGCAGGAGATGGCCTAAAAATAGTCTGCGGTAAATTAACTGCGACATCGAGCAGCGATAACCGAGAA TTAAAACATTTAGTCAAAGGCGCGTTTGAACGAGCACGTAATAATCGTAAAAATATTTTGCCTGAAGCCATGTCTGTTAG TCGCCCCTCTTGTGAGGTCAATTTAGGCATAGTGGTTGAAGTCATCCCAGGTCTTGATTGGGCTGAGGGTAAAGGTCAAG CTCAAGCAATTGTCTACATTCGAGATTCAGTGAGCAAATCTCAAGCCAGTAGCGATATGGCGAAGAAGCTTTTTGGCCTC ACGCCTGCTGAAACAGCCTTGTCTTTACAGTTAACGAATGGTTTGTCGCTAGAAGAGGCATCTGAAGCCCTCAATATTCG TAGAAATACTGCTAGGGCACACTTACGCGCGATTTTTTCCAAAACCGGTGTTCGTCGTCAGACTGAGCTTGTACGAATTT TTCTAAACAGTGTGGCTGCGCTGGGTTATAACAATGTCGATTCAAAAAGTAATGACATTAGAACGGAGGAGTAA
Upstream 100 bases:
>100_bases CACTAACGTAAGTTTAATGTTTTTCGTATAGGCTGGTAGTACAGCCTATACGCAACCAATTTAAAAATAACAAAAATTAT AAAGTTAATTGGAGGGGATT
Downstream 100 bases:
>100_bases CCTGTTATCTAGCTCATTGCTCTACGTTAGATGTAAACGGCGCATTTGGCGAAGCGCCGTGATGATATTATTTGCCGGTA AACACCGCTCGTCTTTTTTC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Regulatory Protein LuxR; Transcriptional Regulator; Transcriptional Regulator LuxR Family Protein; Response Regulator Receiver Protein; CheY-Like Receiver; LuxR-Family Transcriptional Regulator; Two-Component Response Regulator Protein; Transcriptionat Regulator LuxR Family
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MPNIDLEIEYYNDLVESIYDAAQNNSSWSEPLEELRKLFGANYVTLILKQPLPDDEQGIGLMVAVGGNIDDESKIQYLPY GHTLTPFNDQEPNTIVTVDDLMDEQQWIESSYRRHWCMHNDVYHVMAVDISIPDVGNLPFRITRGEADTAFSAEDKALCQ FFVSHLRRALGIHLQLNRSESLGSMYSQAIGRLSIATIKIDEQGKVLDQNIFAREIIDAGDGLKIVCGKLTATSSSDNRE LKHLVKGAFERARNNRKNILPEAMSVSRPSCEVNLGIVVEVIPGLDWAEGKGQAQAIVYIRDSVSKSQASSDMAKKLFGL TPAETALSLQLTNGLSLEEASEALNIRRNTARAHLRAIFSKTGVRRQTELVRIFLNSVAALGYNNVDSKSNDIRTEE
Sequences:
>Translated_397_residues MPNIDLEIEYYNDLVESIYDAAQNNSSWSEPLEELRKLFGANYVTLILKQPLPDDEQGIGLMVAVGGNIDDESKIQYLPY GHTLTPFNDQEPNTIVTVDDLMDEQQWIESSYRRHWCMHNDVYHVMAVDISIPDVGNLPFRITRGEADTAFSAEDKALCQ FFVSHLRRALGIHLQLNRSESLGSMYSQAIGRLSIATIKIDEQGKVLDQNIFAREIIDAGDGLKIVCGKLTATSSSDNRE LKHLVKGAFERARNNRKNILPEAMSVSRPSCEVNLGIVVEVIPGLDWAEGKGQAQAIVYIRDSVSKSQASSDMAKKLFGL TPAETALSLQLTNGLSLEEASEALNIRRNTARAHLRAIFSKTGVRRQTELVRIFLNSVAALGYNNVDSKSNDIRTEE >Mature_396_residues PNIDLEIEYYNDLVESIYDAAQNNSSWSEPLEELRKLFGANYVTLILKQPLPDDEQGIGLMVAVGGNIDDESKIQYLPYG HTLTPFNDQEPNTIVTVDDLMDEQQWIESSYRRHWCMHNDVYHVMAVDISIPDVGNLPFRITRGEADTAFSAEDKALCQF FVSHLRRALGIHLQLNRSESLGSMYSQAIGRLSIATIKIDEQGKVLDQNIFAREIIDAGDGLKIVCGKLTATSSSDNREL KHLVKGAFERARNNRKNILPEAMSVSRPSCEVNLGIVVEVIPGLDWAEGKGQAQAIVYIRDSVSKSQASSDMAKKLFGLT PAETALSLQLTNGLSLEEASEALNIRRNTARAHLRAIFSKTGVRRQTELVRIFLNSVAALGYNNVDSKSNDIRTEE
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44215; Mature: 44084
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNIDLEIEYYNDLVESIYDAAQNNSSWSEPLEELRKLFGANYVTLILKQPLPDDEQGIG CCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCE LMVAVGGNIDDESKIQYLPYGHTLTPFNDQEPNTIVTVDDLMDEQQWIESSYRRHWCMHN EEEEECCCCCCCCCEEEECCCCEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC DVYHVMAVDISIPDVGNLPFRITRGEADTAFSAEDKALCQFFVSHLRRALGIHLQLNRSE CEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCH SLGSMYSQAIGRLSIATIKIDEQGKVLDQNIFAREIIDAGDGLKIVCGKLTATSSSDNRE HHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHH LKHLVKGAFERARNNRKNILPEAMSVSRPSCEVNLGIVVEVIPGLDWAEGKGQAQAIVYI HHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEECEEEEEEECCCCCCCCCCCEEEEEEE RDSVSKSQASSDMAKKLFGLTPAETALSLQLTNGLSLEEASEALNIRRNTARAHLRAIFS ECCCCHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH KTGVRRQTELVRIFLNSVAALGYNNVDSKSNDIRTEE HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PNIDLEIEYYNDLVESIYDAAQNNSSWSEPLEELRKLFGANYVTLILKQPLPDDEQGIG CCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCE LMVAVGGNIDDESKIQYLPYGHTLTPFNDQEPNTIVTVDDLMDEQQWIESSYRRHWCMHN EEEEECCCCCCCCCEEEECCCCEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCC DVYHVMAVDISIPDVGNLPFRITRGEADTAFSAEDKALCQFFVSHLRRALGIHLQLNRSE CEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCH SLGSMYSQAIGRLSIATIKIDEQGKVLDQNIFAREIIDAGDGLKIVCGKLTATSSSDNRE HHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHH LKHLVKGAFERARNNRKNILPEAMSVSRPSCEVNLGIVVEVIPGLDWAEGKGQAQAIVYI HHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCEEECEEEEEEECCCCCCCCCCCEEEEEEE RDSVSKSQASSDMAKKLFGLTPAETALSLQLTNGLSLEEASEALNIRRNTARAHLRAIFS ECCCCHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH KTGVRRQTELVRIFLNSVAALGYNNVDSKSNDIRTEE HCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA