| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961918
Identifier: 157961918
GI number: 157961918
Start: 2539157
End: 2539546
Strand: Direct
Name: 157961918
Synonym: Spea_2097
Alternate gene names: NA
Gene position: 2539157-2539546 (Clockwise)
Preceding gene: 157961916
Following gene: 157961921
Centisome position: 49.07
GC content: 46.41
Gene sequence:
>390_bases ATGAGACGTCATATATTAACCCTTGGCCTACTGTTACTCCCCGTTAGTGCTATGGCAAATATTATTGTCGATAAAACTGG TGTTGATGAGAAAGACTATGTGTACGATCTCCATCAATGCACTGAGATGTCGACTCAAGTCGAGCAAAAACAGACTGAGG GAAGTGCCATCGGCACAGCTGCTAAAGGCGCTGCAATTGGCTCTGCTGGTAAGGCGATAGCAGGAGGCTCAGGTTCTGAA GGCGCAAAACAGGGCGCTGCGATTGGTCTGGGTGTCGGAGTGCTGTCTAAAGGCAGAGAAAGAAGAAACAATAAAGACAC CTACGCCGCCGAACAACAAACAGTGATAAAAAATTGCATGACAAATAGAGGTTACGTTGTACTCAACTGA
Upstream 100 bases:
>100_bases TACTATAATTGATATAAAGCAGTTATCAAAACAGAGTATGTTTGAACAGTTTAAGCATGTTGACTTTAGCAACATCTTAT CAATAAAGAGGAAGCATTGA
Downstream 100 bases:
>100_bases TAGATTACGTTCTGATTGACTTGAATACGGATTAAATCAGCGAGTAAGCTTTGAGTGTTTAAGTAACCGTATTTTAGTCA GCTTGTCAGTAGCCGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MRRHILTLGLLLLPVSAMANIIVDKTGVDEKDYVYDLHQCTEMSTQVEQKQTEGSAIGTAAKGAAIGSAGKAIAGGSGSE GAKQGAAIGLGVGVLSKGRERRNNKDTYAAEQQTVIKNCMTNRGYVVLN
Sequences:
>Translated_129_residues MRRHILTLGLLLLPVSAMANIIVDKTGVDEKDYVYDLHQCTEMSTQVEQKQTEGSAIGTAAKGAAIGSAGKAIAGGSGSE GAKQGAAIGLGVGVLSKGRERRNNKDTYAAEQQTVIKNCMTNRGYVVLN >Mature_129_residues MRRHILTLGLLLLPVSAMANIIVDKTGVDEKDYVYDLHQCTEMSTQVEQKQTEGSAIGTAAKGAAIGSAGKAIAGGSGSE GAKQGAAIGLGVGVLSKGRERRNNKDTYAAEQQTVIKNCMTNRGYVVLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13509; Mature: 13509
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRHILTLGLLLLPVSAMANIIVDKTGVDEKDYVYDLHQCTEMSTQVEQKQTEGSAIGTA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AKGAAIGSAGKAIAGGSGSEGAKQGAAIGLGVGVLSKGRERRNNKDTYAAEQQTVIKNCM CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH TNRGYVVLN CCCCEEEEC >Mature Secondary Structure MRRHILTLGLLLLPVSAMANIIVDKTGVDEKDYVYDLHQCTEMSTQVEQKQTEGSAIGTA CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC AKGAAIGSAGKAIAGGSGSEGAKQGAAIGLGVGVLSKGRERRNNKDTYAAEQQTVIKNCM CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHH TNRGYVVLN CCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA