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The map label for this gene is yfaE [H]

Identifier: 157961883

GI number: 157961883

Start: 2497076

End: 2497486

Strand: Reverse

Name: yfaE [H]

Synonym: Spea_2062

Alternate gene names: 157961883

Gene position: 2497486-2497076 (Counterclockwise)

Preceding gene: 157961884

Following gene: 157961882

Centisome position: 48.26

GC content: 45.01

Gene sequence:

>411_bases
ATGACAATGAGTTCTCAGACTTTGACCTCTAAGCCTGTCAGCTTTAGTCAAGCAAGCTTTAAGAAGGCTCCGATTGTGAG
TCTTCAAGGCATGCCGGTGTTGCTGTTTAATCAGCAGCACCAGACTTTGCTTGAAGCGCTTGAACAAAAGAAGGTTAAGA
TATTCTCTGAATGTCGCAGTGGTTTTTGTGGGCAATGCAAAACTAAAGTCAAAAGCGGTAAAGTCACTTATATCAAAGAG
CCTTTAGTCTCACTCGAGGCTGATGAATGCCTGCCCTGCTGCTGTATTCCTGAAAGTGATATTGATTTGGCGCTGTCAGC
TGAAGGTGCAGAGGTTGTTGTACGTGCAGCCAGTCCTAAACCTGTCATTAATAGCGAATCCATTTCAGCTACCCCGTCAG
TACCTGGCTAA

Upstream 100 bases:

>100_bases
CCATGGATGAAGAACTGGTTAGAGAGTGATTCAGTGCAAGTTGCACCGCAAGAAGTAGAAGTCTCTTCTTATCTTGTTGG
TCAAATCGATTCTTCAATCG

Downstream 100 bases:

>100_bases
GCTCAATTTCTCATTTCAAATTTCATCGCCAACTCGCTATCTAATTCAAGCTTAGTCTCTAGCCTACTGGTGACGAACTT
GGGACTCTCAAGCTTCGCTT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MTMSSQTLTSKPVSFSQASFKKAPIVSLQGMPVLLFNQQHQTLLEALEQKKVKIFSECRSGFCGQCKTKVKSGKVTYIKE
PLVSLEADECLPCCCIPESDIDLALSAEGAEVVVRAASPKPVINSESISATPSVPG

Sequences:

>Translated_136_residues
MTMSSQTLTSKPVSFSQASFKKAPIVSLQGMPVLLFNQQHQTLLEALEQKKVKIFSECRSGFCGQCKTKVKSGKVTYIKE
PLVSLEADECLPCCCIPESDIDLALSAEGAEVVVRAASPKPVINSESISATPSVPG
>Mature_135_residues
TMSSQTLTSKPVSFSQASFKKAPIVSLQGMPVLLFNQQHQTLLEALEQKKVKIFSECRSGFCGQCKTKVKSGKVTYIKEP
LVSLEADECLPCCCIPESDIDLALSAEGAEVVVRAASPKPVINSESISATPSVPG

Specific function: Unknown

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788568, Length=72, Percent_Identity=41.6666666666667, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 14549; Mature: 14418

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS00197 2FE2S_FER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSSQTLTSKPVSFSQASFKKAPIVSLQGMPVLLFNQQHQTLLEALEQKKVKIFSECRS
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
GFCGQCKTKVKSGKVTYIKEPLVSLEADECLPCCCIPESDIDLALSAEGAEVVVRAASPK
CCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCEEEECCCCEEEEEECCCC
PVINSESISATPSVPG
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TMSSQTLTSKPVSFSQASFKKAPIVSLQGMPVLLFNQQHQTLLEALEQKKVKIFSECRS
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHCC
GFCGQCKTKVKSGKVTYIKEPLVSLEADECLPCCCIPESDIDLALSAEGAEVVVRAASPK
CCCCCCHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCEEEECCCCEEEEEECCCC
PVINSESISATPSVPG
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]