Click here to switch to the map view.

The map label for this gene is hypA [H]

Identifier: 157961844

GI number: 157961844

Start: 2448962

End: 2449309

Strand: Reverse

Name: hypA [H]

Synonym: Spea_2023

Alternate gene names: 157961844

Gene position: 2449309-2448962 (Counterclockwise)

Preceding gene: 157961845

Following gene: 157961828

Centisome position: 47.33

GC content: 43.1

Gene sequence:

>348_bases
GTGCACGAGTATTCAATTGTTACAGCACTAATTGAAGAGTGCGAACGCCATGCCGCGGCCAATAACGCAAATGAAATTAG
CCGTGTTGAAATCAAACTTGGAATTTTGAGCGGAGTAGAACCAGAATTACTCAGGACGGCATTCGAGACCTTTAAGTTAG
AAGGGATCTGTCGTAGAGCCGAGCTAGTTATGAATATCCAACCCTTGGTACTCTCATGTTTAATTTGTGGTGAAACTACC
GAACATAACGAGCGAAGCGTTATTTGTAGTCATTGTCAAAGCGGTCAGACGAAAGTCCTAGATGGAGAGGATATGTTACT
CATGCAGCTAGAATTAGTGCAACCTTAG

Upstream 100 bases:

>100_bases
TAAACGATAACCGCAAAGGAAAAGTTGTACTCAACACGCCTTGGGGGAGCTCTCGTTATCTAGACTTACCACAAGGCGAG
CTGTTACCGAGGATCTGCTA

Downstream 100 bases:

>100_bases
TTGGCTCGAAATGATTAGCCCTACTCTTAAGGGTAGGGCATATTAATATCTCAATTTATTTACCTATTTAATAGTTAAGT
ATGCAATCTAACCAGTCAAT

Product: hydrogenase expression/synthesis HypA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MHEYSIVTALIEECERHAAANNANEISRVEIKLGILSGVEPELLRTAFETFKLEGICRRAELVMNIQPLVLSCLICGETT
EHNERSVICSHCQSGQTKVLDGEDMLLMQLELVQP

Sequences:

>Translated_115_residues
MHEYSIVTALIEECERHAAANNANEISRVEIKLGILSGVEPELLRTAFETFKLEGICRRAELVMNIQPLVLSCLICGETT
EHNERSVICSHCQSGQTKVLDGEDMLLMQLELVQP
>Mature_115_residues
MHEYSIVTALIEECERHAAANNANEISRVEIKLGILSGVEPELLRTAFETFKLEGICRRAELVMNIQPLVLSCLICGETT
EHNERSVICSHCQSGQTKVLDGEDMLLMQLELVQP

Specific function: Probably plays a role in an hydrogenase nickel cofactor insertion step [H]

COG id: COG0375

COG function: function code R; Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypA/hybF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000688 [H]

Pfam domain/function: PF01155 HypA [H]

EC number: NA

Molecular weight: Translated: 12853; Mature: 12853

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEYSIVTALIEECERHAAANNANEISRVEIKLGILSGVEPELLRTAFETFKLEGICRRA
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
ELVMNIQPLVLSCLICGETTEHNERSVICSHCQSGQTKVLDGEDMLLMQLELVQP
HHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEECCCCEEEEEEEECCC
>Mature Secondary Structure
MHEYSIVTALIEECERHAAANNANEISRVEIKLGILSGVEPELLRTAFETFKLEGICRRA
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
ELVMNIQPLVLSCLICGETTEHNERSVICSHCQSGQTKVLDGEDMLLMQLELVQP
HHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEECCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA