Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961843

Identifier: 157961843

GI number: 157961843

Start: 2447811

End: 2448866

Strand: Direct

Name: 157961843

Synonym: Spea_2022

Alternate gene names: NA

Gene position: 2447811-2448866 (Clockwise)

Preceding gene: 157961842

Following gene: 157961856

Centisome position: 47.3

GC content: 41.76

Gene sequence:

>1056_bases
ATGACAATAAAATGGATACTCGAATATGGCGGGAGGAAAGCATCCTTTATCTCTTTAGTAAGAGCATGTTTGATGGTCGG
TATATTGTCAGTTCTGTCTGCTTGTAGTTCTACGCCAGAAGAGACACTAACACCAGTAAAAGCGCCTGAGCGCCAAGATT
TACTTGATGTTGGCGCTTTATCATCCGTAAGTGCGGACTTCTCTGCACCAGCTACTGAAGAAGAAGCGTTACTAAAAGCT
CATAACGAAGAAAAGTCAGGCAATATTGAAAAAGCACTATATGCTTACATTCAAGCACTGGATTTCAACGCTAGAAATGC
ACAAACCTTCTATCAAATAGGCCGTATACATACCATGAGGGGAAATCCTGAAATAGCTCTTAAGGCCTATAATGAAGCGC
TCGCTATTGACCCTAATTTGATGATGGTTCATGCAGATCTTGGGGTTATTAGCATGGATAAGCGCCAATATAGAGACGCA
CGTTTACACTTAGAAAAGGCAATTGAGTTAGATCAACAAAGGTTAGCAGAGCTGGAAGTACAGCAGGTCATGGGGTCTTT
CTTAGTACCGAATAGAGAGTCACCGGCGAGAGTGTATAACGCCATTGCGATTCTGGAAGATGTAGAAAATAATCATCGAC
AGGCTAGAGAATATTTCAAATTGATTCTAGAGCTTCAGCCTCACTCGGCGGTATTGATTACCAATCTTGGTTATTCTTAC
TATTTAACGGGTGAATTAACCATGGCAGAAAAATATTTAAGGCAAGCTCTTAGAGAAGACTCTCGCTTTGACAGAGCTTG
GACAAACTTAGGTCTTGTCTATGTCCGTAAAGGTATTTACAAGCGTGCGCTTTCCGCTTTTGAACAGACTATGTCTCCTG
CTGATGCGTTAAATGATTTGGGTTACTTTTTGATGCTTGAGGGCAAGTATGAACGAGCGATTGCTTTATTTGAACGAGCA
ATTGACATGTCTCCTAGTTATTTTGATCAGGCTCAGAAAAACTTAAGAAGGGCTAGGGCCGAGATCTCGGATGAGTTTCA
GCATGCGGGCTATTGA

Upstream 100 bases:

>100_bases
TTGGCCGTCATTTTTTATCGTTGCTGTAGGACCTGCGGTATTAAAAGTGATGAAAGTATGGGGTCAGGCTTTTTAGTAAA
ATGATAAAAAGGAGATGATT

Downstream 100 bases:

>100_bases
CTGGTTAGATTGCATACTTAACTATTAAATAGGTAAATAAATTGAGATATTAATATGCCCTACCCTTAAGAGTAGGGCTA
ATCATTTCGAGCCAACTAAG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Peptidase; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Repeat Protein; TPR Domain Containing Protein; TPR-Repeat-Containing Protein; Sulfotransferase; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Flp Pilus Assembly Protein TadD; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; O-Linked GlcNAc Transferase

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MTIKWILEYGGRKASFISLVRACLMVGILSVLSACSSTPEETLTPVKAPERQDLLDVGALSSVSADFSAPATEEEALLKA
HNEEKSGNIEKALYAYIQALDFNARNAQTFYQIGRIHTMRGNPEIALKAYNEALAIDPNLMMVHADLGVISMDKRQYRDA
RLHLEKAIELDQQRLAELEVQQVMGSFLVPNRESPARVYNAIAILEDVENNHRQAREYFKLILELQPHSAVLITNLGYSY
YLTGELTMAEKYLRQALREDSRFDRAWTNLGLVYVRKGIYKRALSAFEQTMSPADALNDLGYFLMLEGKYERAIALFERA
IDMSPSYFDQAQKNLRRARAEISDEFQHAGY

Sequences:

>Translated_351_residues
MTIKWILEYGGRKASFISLVRACLMVGILSVLSACSSTPEETLTPVKAPERQDLLDVGALSSVSADFSAPATEEEALLKA
HNEEKSGNIEKALYAYIQALDFNARNAQTFYQIGRIHTMRGNPEIALKAYNEALAIDPNLMMVHADLGVISMDKRQYRDA
RLHLEKAIELDQQRLAELEVQQVMGSFLVPNRESPARVYNAIAILEDVENNHRQAREYFKLILELQPHSAVLITNLGYSY
YLTGELTMAEKYLRQALREDSRFDRAWTNLGLVYVRKGIYKRALSAFEQTMSPADALNDLGYFLMLEGKYERAIALFERA
IDMSPSYFDQAQKNLRRARAEISDEFQHAGY
>Mature_350_residues
TIKWILEYGGRKASFISLVRACLMVGILSVLSACSSTPEETLTPVKAPERQDLLDVGALSSVSADFSAPATEEEALLKAH
NEEKSGNIEKALYAYIQALDFNARNAQTFYQIGRIHTMRGNPEIALKAYNEALAIDPNLMMVHADLGVISMDKRQYRDAR
LHLEKAIELDQQRLAELEVQQVMGSFLVPNRESPARVYNAIAILEDVENNHRQAREYFKLILELQPHSAVLITNLGYSYY
LTGELTMAEKYLRQALREDSRFDRAWTNLGLVYVRKGIYKRALSAFEQTMSPADALNDLGYFLMLEGKYERAIALFERAI
DMSPSYFDQAQKNLRRARAEISDEFQHAGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=255, Percent_Identity=26.2745098039216, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI32307148, Length=255, Percent_Identity=26.2745098039216, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39820; Mature: 39689

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKWILEYGGRKASFISLVRACLMVGILSVLSACSSTPEETLTPVKAPERQDLLDVGAL
CCEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHCCH
SSVSADFSAPATEEEALLKAHNEEKSGNIEKALYAYIQALDFNARNAQTFYQIGRIHTMR
HHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEC
GNPEIALKAYNEALAIDPNLMMVHADLGVISMDKRQYRDARLHLEKAIELDQQRLAELEV
CCCCEEEEECCCEEEECCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQVMGSFLVPNRESPARVYNAIAILEDVENNHRQAREYFKLILELQPHSAVLITNLGYSY
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE
YLTGELTMAEKYLRQALREDSRFDRAWTNLGLVYVRKGIYKRALSAFEQTMSPADALNDL
EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
GYFLMLEGKYERAIALFERAIDMSPSYFDQAQKNLRRARAEISDEFQHAGY
CEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIKWILEYGGRKASFISLVRACLMVGILSVLSACSSTPEETLTPVKAPERQDLLDVGAL
CEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHCCH
SSVSADFSAPATEEEALLKAHNEEKSGNIEKALYAYIQALDFNARNAQTFYQIGRIHTMR
HHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEC
GNPEIALKAYNEALAIDPNLMMVHADLGVISMDKRQYRDARLHLEKAIELDQQRLAELEV
CCCCEEEEECCCEEEECCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQVMGSFLVPNRESPARVYNAIAILEDVENNHRQAREYFKLILELQPHSAVLITNLGYSY
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEE
YLTGELTMAEKYLRQALREDSRFDRAWTNLGLVYVRKGIYKRALSAFEQTMSPADALNDL
EEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHC
GYFLMLEGKYERAIALFERAIDMSPSYFDQAQKNLRRARAEISDEFQHAGY
CEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA