| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961807
Identifier: 157961807
GI number: 157961807
Start: 2410860
End: 2411099
Strand: Reverse
Name: 157961807
Synonym: Spea_1984
Alternate gene names: NA
Gene position: 2411099-2410860 (Counterclockwise)
Preceding gene: 157961808
Following gene: 157961802
Centisome position: 46.6
GC content: 40.42
Gene sequence:
>240_bases ATGTCAGATCTTGAAGTCGGTTTATTGATTTTATTAGTGATCGGAGTGATTGCCAGTAATCTTGCGGTATTAAAGTACAG TGCAAAACACAAGATGACACAGTTTGGTAAGCATGATCACGGTAAAAAACAATCTGCAAAGGATGCTAAAGCTCCAAGCG GTGAAGATGCTAGCAATACCGATAACCAAGCTGAAAGTCCATCGAGTCACGACGACAAGACTGACACTGATAAGTCATAA
Upstream 100 bases:
>100_bases AAAGTTGCAATCAGCGCATTTGATTTCCCAGAAGTTGATACTCCTGAAGATATTCGAATCTGCGAAGCAAGACTTACCGT TGACTAATTGAGGATGAATG
Downstream 100 bases:
>100_bases GAACTCAGTGAATCATCCATAAAAAAGGCGCTGTCTGCGCCTTTTTACTTTTACATCCATTGCTAGTTAAGTAACAACCT CATCTTTTAACTCTTGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSDLEVGLLILLVIGVIASNLAVLKYSAKHKMTQFGKHDHGKKQSAKDAKAPSGEDASNTDNQAESPSSHDDKTDTDKS
Sequences:
>Translated_79_residues MSDLEVGLLILLVIGVIASNLAVLKYSAKHKMTQFGKHDHGKKQSAKDAKAPSGEDASNTDNQAESPSSHDDKTDTDKS >Mature_78_residues SDLEVGLLILLVIGVIASNLAVLKYSAKHKMTQFGKHDHGKKQSAKDAKAPSGEDASNTDNQAESPSSHDDKTDTDKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8422; Mature: 8291
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLEVGLLILLVIGVIASNLAVLKYSAKHKMTQFGKHDHGKKQSAKDAKAPSGEDASNT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DNQAESPSSHDDKTDTDKS CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SDLEVGLLILLVIGVIASNLAVLKYSAKHKMTQFGKHDHGKKQSAKDAKAPSGEDASNT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC DNQAESPSSHDDKTDTDKS CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA