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The map label for this gene is ycgB [H]

Identifier: 157961783

GI number: 157961783

Start: 2383910

End: 2385424

Strand: Reverse

Name: ycgB [H]

Synonym: Spea_1960

Alternate gene names: 157961783

Gene position: 2385424-2383910 (Counterclockwise)

Preceding gene: 157961784

Following gene: 157961775

Centisome position: 46.1

GC content: 41.19

Gene sequence:

>1515_bases
ATGGACAATCAAAAAAAGAGAACACCATTAGACGATGGTCCAGATTGGAACTTCGACTTATTACAGAGTTATCTAACCGA
AATAGAACGGGTTGCAGACTTTTATCGCTTAGATGCCTACCCGAATCAAATTGAAGTCATTACGGCAGAACAGATGATGG
ACGCCTATGCAGGTATAGGGATGCCGATCGGTTACACCCACTGGTCTTTCGGTAAGCGTTTTATCGAGACCGAGCAAGGT
TATAAACGCGGCCAAATGGGATTAGCTTATGAAATAGTCATTAATTCAGATCCTTGTATCGCCTATTTAATGGAAGAAAA
CACTATTACGATGCAAGCACTCGTGATGGCCCATGCGAGTTTCGGCCATAATAGCTTTTTTAAAGGTAATTACCTTTTTA
AGACTTGGACCGATGCCAGCTCAATTATTGACTATCTAGTATTCGCCCGAAATTATATCAGTGAGTGCGAAGAGCTTTAT
GGGATTAATAAAGTTGAGAGTGTAATCGACTCTTGTCATGCGCTTATGAGTTACGGCGTCGATCGATATAAGCGCCCTAG
TGAGATTTCATTTAAAGAAGAGAAGATGCGCCAAAAAGATAGAGAGGCATACCTTCAGAGTCAAGTGAATGAACTATGGC
GTACGATTCCAGATCTCCCGCAAGAGGAAGCAAAAGAAGAAACAATACGCTTTCCGTCTGAACCACAAGAAAACATTCTT
TACTTTATCGAAAAGAATGCACCACTACTTGAGCCTTGGCAGCGTGAGATCGTGCGAATCGTGAGGAAAATGGGCCAATA
CTTCTATCCACAAAAACAAACCCAAGTAATGAATGAGGGGTGGGCGACATTTTGGCACTATACCATCCTCAATCACCTTT
ATGATGAAGGCTTGGTGACAGACCGATTTATGCTTGAGTTTTTACAAAGTCATACTAACGTAGTAGCGCAACCTAACTAT
AACAGTCCTCATTACAGTGGTATTAACCCCTATGCTCTGGGCTTTAATATGTTCGTTGATATTAGACGGATCTGTGAAAA
CCCAACTGACGAAGATAAGGAGTGGTTCCCGGAAATTGCCGGAAGCGATTGGCTCACGACGCTACACTTTGCTATGGAAA
ACTTCAAAGATGAAAGTTTTATTAGCCAATATTTGTCACCGAATATCATTAGGCAGTTTAAACTTTTCTCAGTATTAGAT
GATGACAGGAAAAACCATATTAGTGTGTCGGCAATTCACGATGAGGAGGGATATAAAGAGATAAGACAGAAACTCTCCCA
GCAATATAACCTGTCAAACTTAGAGCCTAATATTCAAGTACAGAATGTCGAGGTCACTGGAGATCGTTCTATTACCTTAA
GATATATACCTAACGCTAGGATCCCTCTTGCAGAAACTTGCCACGAAGTCGTCAAACATCTACATCGACTATGGGGATTT
GATGTAAAGCTTGAGCAGTGTGATGAAAATAAGTCGCATATCATCGCATCTTGCCCAGAAAAAACTGAAGCCTAA

Upstream 100 bases:

>100_bases
GTCTCATAATAATATTGCTGTACAACATATAAAACAGGAACAAGATATTTATCCTGTGTTTAGAGAGCTATTTAAGAAGC
AGGCTGTTTAGGGGGCGATT

Downstream 100 bases:

>100_bases
ACACACAAAACCTGTTTAACCGCAGACATAAAAAAAGCGCCTATTATAGGCGCTTTTTTCAAATCTACTTAAAAATTAAG
CAAATTTGAAGTCAACGTGT

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MDNQKKRTPLDDGPDWNFDLLQSYLTEIERVADFYRLDAYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIETEQG
YKRGQMGLAYEIVINSDPCIAYLMEENTITMQALVMAHASFGHNSFFKGNYLFKTWTDASSIIDYLVFARNYISECEELY
GINKVESVIDSCHALMSYGVDRYKRPSEISFKEEKMRQKDREAYLQSQVNELWRTIPDLPQEEAKEETIRFPSEPQENIL
YFIEKNAPLLEPWQREIVRIVRKMGQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVTDRFMLEFLQSHTNVVAQPNY
NSPHYSGINPYALGFNMFVDIRRICENPTDEDKEWFPEIAGSDWLTTLHFAMENFKDESFISQYLSPNIIRQFKLFSVLD
DDRKNHISVSAIHDEEGYKEIRQKLSQQYNLSNLEPNIQVQNVEVTGDRSITLRYIPNARIPLAETCHEVVKHLHRLWGF
DVKLEQCDENKSHIIASCPEKTEA

Sequences:

>Translated_504_residues
MDNQKKRTPLDDGPDWNFDLLQSYLTEIERVADFYRLDAYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIETEQG
YKRGQMGLAYEIVINSDPCIAYLMEENTITMQALVMAHASFGHNSFFKGNYLFKTWTDASSIIDYLVFARNYISECEELY
GINKVESVIDSCHALMSYGVDRYKRPSEISFKEEKMRQKDREAYLQSQVNELWRTIPDLPQEEAKEETIRFPSEPQENIL
YFIEKNAPLLEPWQREIVRIVRKMGQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVTDRFMLEFLQSHTNVVAQPNY
NSPHYSGINPYALGFNMFVDIRRICENPTDEDKEWFPEIAGSDWLTTLHFAMENFKDESFISQYLSPNIIRQFKLFSVLD
DDRKNHISVSAIHDEEGYKEIRQKLSQQYNLSNLEPNIQVQNVEVTGDRSITLRYIPNARIPLAETCHEVVKHLHRLWGF
DVKLEQCDENKSHIIASCPEKTEA
>Mature_504_residues
MDNQKKRTPLDDGPDWNFDLLQSYLTEIERVADFYRLDAYPNQIEVITAEQMMDAYAGIGMPIGYTHWSFGKRFIETEQG
YKRGQMGLAYEIVINSDPCIAYLMEENTITMQALVMAHASFGHNSFFKGNYLFKTWTDASSIIDYLVFARNYISECEELY
GINKVESVIDSCHALMSYGVDRYKRPSEISFKEEKMRQKDREAYLQSQVNELWRTIPDLPQEEAKEETIRFPSEPQENIL
YFIEKNAPLLEPWQREIVRIVRKMGQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVTDRFMLEFLQSHTNVVAQPNY
NSPHYSGINPYALGFNMFVDIRRICENPTDEDKEWFPEIAGSDWLTTLHFAMENFKDESFISQYLSPNIIRQFKLFSVLD
DDRKNHISVSAIHDEEGYKEIRQKLSQQYNLSNLEPNIQVQNVEVTGDRSITLRYIPNARIPLAETCHEVVKHLHRLWGF
DVKLEQCDENKSHIIASCPEKTEA

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=498, Percent_Identity=73.4939759036145, Blast_Score=791, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59193; Mature: 59193

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQKKRTPLDDGPDWNFDLLQSYLTEIERVADFYRLDAYPNQIEVITAEQMMDAYAGIG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCC
MPIGYTHWSFGKRFIETEQGYKRGQMGLAYEIVINSDPCIAYLMEENTITMQALVMAHAS
CCCCCCCHHHHHHHHHHHHCHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHH
FGHNSFFKGNYLFKTWTDASSIIDYLVFARNYISECEELYGINKVESVIDSCHALMSYGV
CCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCH
DRYKRPSEISFKEEKMRQKDREAYLQSQVNELWRTIPDLPQEEAKEETIRFPSEPQENIL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEE
YFIEKNAPLLEPWQREIVRIVRKMGQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVT
EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCHH
DRFMLEFLQSHTNVVAQPNYNSPHYSGINPYALGFNMFVDIRRICENPTDEDKEWFPEIA
HHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC
GSDWLTTLHFAMENFKDESFISQYLSPNIIRQFKLFSVLDDDRKNHISVSAIHDEEGYKE
CCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHH
IRQKLSQQYNLSNLEPNIQVQNVEVTGDRSITLRYIPNARIPLAETCHEVVKHLHRLWGF
HHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
DVKLEQCDENKSHIIASCPEKTEA
CCCHHHCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MDNQKKRTPLDDGPDWNFDLLQSYLTEIERVADFYRLDAYPNQIEVITAEQMMDAYAGIG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCC
MPIGYTHWSFGKRFIETEQGYKRGQMGLAYEIVINSDPCIAYLMEENTITMQALVMAHAS
CCCCCCCHHHHHHHHHHHHCHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHH
FGHNSFFKGNYLFKTWTDASSIIDYLVFARNYISECEELYGINKVESVIDSCHALMSYGV
CCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCH
DRYKRPSEISFKEEKMRQKDREAYLQSQVNELWRTIPDLPQEEAKEETIRFPSEPQENIL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEE
YFIEKNAPLLEPWQREIVRIVRKMGQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVT
EEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCHH
DRFMLEFLQSHTNVVAQPNYNSPHYSGINPYALGFNMFVDIRRICENPTDEDKEWFPEIA
HHHHHHHHHHHCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHC
GSDWLTTLHFAMENFKDESFISQYLSPNIIRQFKLFSVLDDDRKNHISVSAIHDEEGYKE
CCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHH
IRQKLSQQYNLSNLEPNIQVQNVEVTGDRSITLRYIPNARIPLAETCHEVVKHLHRLWGF
HHHHHHHHCCCCCCCCCEEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
DVKLEQCDENKSHIIASCPEKTEA
CCCHHHCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]