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The map label for this gene is ycbZ [C]

Identifier: 157961775

GI number: 157961775

Start: 2374251

End: 2375963

Strand: Reverse

Name: ycbZ [C]

Synonym: Spea_1952

Alternate gene names: 157961775

Gene position: 2375963-2374251 (Counterclockwise)

Preceding gene: 157961783

Following gene: 157961774

Centisome position: 45.92

GC content: 43.9

Gene sequence:

>1713_bases
ATGAACTCAAACGTTATTCCTGCTTCGGCTCTTGTTCCAATTTTTAACCTTCCAGCGGAACAGGCGTTCATCCCTAGCGC
AAAAGCAGATTTGCTTGGACAAGAGCGCAGTCTAGATGCATTTCGATTACTCACAGCAACCGATAATCAGCACATGTACT
TGGCGGATTACTTTGGTTGTAACCGCAAACATATAATCGACGCATTGGTTAAGGAGCAAGGCCAGTTTCCGGCGCTAAGC
TTAACCTTCAATGAAGATAAGAGCACCGCTTGGGTTGAACAGGATATTGCCACCTCAGCGTCGCAACTTGCGACGAAAAC
AGATCAATATCAATATCTTTCAGGTTCAATACGAAAAGTCGACCTAATCGGTCGCTATCACAGCGAAACACAAACCTATG
AAGCGGGACTTTTGGCCAGCTGTCATTATCTGTTTATCTGTGCCGATTCTTTGTGGAAGAAAGAAAACCTTTGGGATCTT
TTACTTGAAATTCTCGACAAGCAAAGCTACCAGGTACACTCACAGCTACCGCCTTTGGCGTTAAAATGTAAAGTAATTCT
CATTGGCTCGAGTAATCAGTATGGCCACTGTTGGCTTGGCGAGCCTAGCTTTTCGCGCCACTTCCCGCTTCTTGGCGAAT
TGATCAATGAGATGGACTTATCAGAGCACTCATCCATTGACTACTGCCAATGGCTAGCCCGTATATTATGTGAGTTGAAT
ATAAGCTTAACTAGCTCGGCGCTACTATTGTTACTGCAGTATAGCGCCAAGCTCGCCGATCACCAGCAGCGGTTAAGCTT
AATGGCGACGAATCTAGAACACTTGTTAGCCCAAGCTAAAGTCTATGCTCAAAGCACTGAGATCTCATCTCAAGCGCTAT
TACACAGTATTAGCATGACTACCCAGCGCCACAATGCATCAGAGAGACTCTCTGAGCAGAACTTTAATGATCTATTTATC
AATTTACCTACTCAAGATGAGATTGTTGGCCAGATAAACGGTTTAACCGTAATAGAAAATGCTGAATTTAGCTATGGAGA
GCCTGCGCGTATTACTGCATCAGTTCACTATGGTGATGGTGAAGTTGCCGATATTGAACGTAAGTCTGAATTAGGCGGTA
ATATTCACGCTAAAGGAATGATGATCCTATCAGCATGTCTTTACCGAATCTTTGGTAAAGATGCCCCACTCCATCTCAAT
GCCAATATCGTGTTTGAGCAATCCTATCAAGAAATTGATGGCGATAGCGCCTCGCTCGCTGAATATTGCTGTTTAATTTC
GGCTATTTCAGAAAAACCTATCAGACAAAGTTTAGCTGCCACTGGCGCTATCGATCAATTTGGCAATGTACAAGCCATTG
GCGGCGTAAACGAAAAAATTGAGGGTTTCTTCAAACTCTGCAAGCGCCGAGGTCTAACGGGACAACAAGGAGTCATCATT
CCGTCCTCTAACATGCAGCAGCTAAATTTGCACCAAGACGTTGTAGAAGCCATCAGAGCTGGCCAGTTCACCTTATATCA
GGTTAAGCATATTGATGAAGCCGTCGAGATTTTAATGCAAACCCAAGCAGGCATCGCAGATGAGGATAACCAGTTCCCCG
ACGAGTCACTATATGGCTTAGTACAATCTCGTTTAGAAAACTTGGCAGGTTATCAGGACGAAGAAAAGAGTCTTTTTGCA
AGACTCGTCGATAAATTGAGATTTTTTAGCTGA

Upstream 100 bases:

>100_bases
CCTAGATACAAAGACCAAAGGTGCAACCTAAACGTTATCTGTCAAAGCCTAGCAAAAAATGTGCTAGTATCACCCTACTA
AAAATAGGCATACACTTTCT

Downstream 100 bases:

>100_bases
TCGGAGTTGTTTAGCGTACACGTGTTCGCTAATCTTGGCAGCTCAAATTGCTGGAGTATCAAAAATAATGAGTAACGCAA
ATAGTTTTACCAAAGAAGAT

Product: peptidase S16 lon domain-containing protein

Products: NA

Alternate protein names: ATP-dependent protease La homolog [H]

Number of amino acids: Translated: 570; Mature: 570

Protein sequence:

>570_residues
MNSNVIPASALVPIFNLPAEQAFIPSAKADLLGQERSLDAFRLLTATDNQHMYLADYFGCNRKHIIDALVKEQGQFPALS
LTFNEDKSTAWVEQDIATSASQLATKTDQYQYLSGSIRKVDLIGRYHSETQTYEAGLLASCHYLFICADSLWKKENLWDL
LLEILDKQSYQVHSQLPPLALKCKVILIGSSNQYGHCWLGEPSFSRHFPLLGELINEMDLSEHSSIDYCQWLARILCELN
ISLTSSALLLLLQYSAKLADHQQRLSLMATNLEHLLAQAKVYAQSTEISSQALLHSISMTTQRHNASERLSEQNFNDLFI
NLPTQDEIVGQINGLTVIENAEFSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGKDAPLHLN
ANIVFEQSYQEIDGDSASLAEYCCLISAISEKPIRQSLAATGAIDQFGNVQAIGGVNEKIEGFFKLCKRRGLTGQQGVII
PSSNMQQLNLHQDVVEAIRAGQFTLYQVKHIDEAVEILMQTQAGIADEDNQFPDESLYGLVQSRLENLAGYQDEEKSLFA
RLVDKLRFFS

Sequences:

>Translated_570_residues
MNSNVIPASALVPIFNLPAEQAFIPSAKADLLGQERSLDAFRLLTATDNQHMYLADYFGCNRKHIIDALVKEQGQFPALS
LTFNEDKSTAWVEQDIATSASQLATKTDQYQYLSGSIRKVDLIGRYHSETQTYEAGLLASCHYLFICADSLWKKENLWDL
LLEILDKQSYQVHSQLPPLALKCKVILIGSSNQYGHCWLGEPSFSRHFPLLGELINEMDLSEHSSIDYCQWLARILCELN
ISLTSSALLLLLQYSAKLADHQQRLSLMATNLEHLLAQAKVYAQSTEISSQALLHSISMTTQRHNASERLSEQNFNDLFI
NLPTQDEIVGQINGLTVIENAEFSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGKDAPLHLN
ANIVFEQSYQEIDGDSASLAEYCCLISAISEKPIRQSLAATGAIDQFGNVQAIGGVNEKIEGFFKLCKRRGLTGQQGVII
PSSNMQQLNLHQDVVEAIRAGQFTLYQVKHIDEAVEILMQTQAGIADEDNQFPDESLYGLVQSRLENLAGYQDEEKSLFA
RLVDKLRFFS
>Mature_570_residues
MNSNVIPASALVPIFNLPAEQAFIPSAKADLLGQERSLDAFRLLTATDNQHMYLADYFGCNRKHIIDALVKEQGQFPALS
LTFNEDKSTAWVEQDIATSASQLATKTDQYQYLSGSIRKVDLIGRYHSETQTYEAGLLASCHYLFICADSLWKKENLWDL
LLEILDKQSYQVHSQLPPLALKCKVILIGSSNQYGHCWLGEPSFSRHFPLLGELINEMDLSEHSSIDYCQWLARILCELN
ISLTSSALLLLLQYSAKLADHQQRLSLMATNLEHLLAQAKVYAQSTEISSQALLHSISMTTQRHNASERLSEQNFNDLFI
NLPTQDEIVGQINGLTVIENAEFSYGEPARITASVHYGDGEVADIERKSELGGNIHAKGMMILSACLYRIFGKDAPLHLN
ANIVFEQSYQEIDGDSASLAEYCCLISAISEKPIRQSLAATGAIDQFGNVQAIGGVNEKIEGFFKLCKRRGLTGQQGVII
PSSNMQQLNLHQDVVEAIRAGQFTLYQVKHIDEAVEILMQTQAGIADEDNQFPDESLYGLVQSRLENLAGYQDEEKSLFA
RLVDKLRFFS

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family [H]

Homologues:

Organism=Escherichia coli, GI1787188, Length=406, Percent_Identity=36.2068965517241, Blast_Score=246, Evalue=3e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008269
- InterPro:   IPR008268
- InterPro:   IPR001984
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 63585; Mature: 63585

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSNVIPASALVPIFNLPAEQAFIPSAKADLLGQERSLDAFRLLTATDNQHMYLADYFGC
CCCCCCCHHHHHHHHCCCCHHHCCCCCHHHHCCCCCCCCCEEEEEECCCCEEEEHHHHCC
NRKHIIDALVKEQGQFPALSLTFNEDKSTAWVEQDIATSASQLATKTDQYQYLSGSIRKV
CHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEE
DLIGRYHSETQTYEAGLLASCHYLFICADSLWKKENLWDLLLEILDKQSYQVHSQLPPLA
EEHHHHCCCCHHHHHHHHHHHHEEEEECHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCEE
LKCKVILIGSSNQYGHCWLGEPSFSRHFPLLGELINEMDLSEHSSIDYCQWLARILCELN
EEEEEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
ISLTSSALLLLLQYSAKLADHQQRLSLMATNLEHLLAQAKVYAQSTEISSQALLHSISMT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQRHNASERLSEQNFNDLFINLPTQDEIVGQINGLTVIENAEFSYGEPARITASVHYGDG
HHHCCHHHHHHHCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCC
EVADIERKSELGGNIHAKGMMILSACLYRIFGKDAPLHLNANIVFEQSYQEIDGDSASLA
CEECCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHHHCCCCHHHHH
EYCCLISAISEKPIRQSLAATGAIDQFGNVQAIGGVNEKIEGFFKLCKRRGLTGQQGVII
HHHHHHHHHHCCHHHHHHHHHCCHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEE
PSSNMQQLNLHQDVVEAIRAGQFTLYQVKHIDEAVEILMQTQAGIADEDNQFPDESLYGL
CCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VQSRLENLAGYQDEEKSLFARLVDKLRFFS
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSNVIPASALVPIFNLPAEQAFIPSAKADLLGQERSLDAFRLLTATDNQHMYLADYFGC
CCCCCCCHHHHHHHHCCCCHHHCCCCCHHHHCCCCCCCCCEEEEEECCCCEEEEHHHHCC
NRKHIIDALVKEQGQFPALSLTFNEDKSTAWVEQDIATSASQLATKTDQYQYLSGSIRKV
CHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEE
DLIGRYHSETQTYEAGLLASCHYLFICADSLWKKENLWDLLLEILDKQSYQVHSQLPPLA
EEHHHHCCCCHHHHHHHHHHHHEEEEECHHHHCCCCHHHHHHHHHCCCCHHHHHCCCCEE
LKCKVILIGSSNQYGHCWLGEPSFSRHFPLLGELINEMDLSEHSSIDYCQWLARILCELN
EEEEEEEEECCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC
ISLTSSALLLLLQYSAKLADHQQRLSLMATNLEHLLAQAKVYAQSTEISSQALLHSISMT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TQRHNASERLSEQNFNDLFINLPTQDEIVGQINGLTVIENAEFSYGEPARITASVHYGDG
HHHCCHHHHHHHCCCCEEEEECCCCHHHHHHCCCEEEEECCCCCCCCCCEEEEEEECCCC
EVADIERKSELGGNIHAKGMMILSACLYRIFGKDAPLHLNANIVFEQSYQEIDGDSASLA
CEECCHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCEEECCEEEEECCHHHCCCCHHHHH
EYCCLISAISEKPIRQSLAATGAIDQFGNVQAIGGVNEKIEGFFKLCKRRGLTGQQGVII
HHHHHHHHHHCCHHHHHHHHHCCHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEE
PSSNMQQLNLHQDVVEAIRAGQFTLYQVKHIDEAVEILMQTQAGIADEDNQFPDESLYGL
CCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
VQSRLENLAGYQDEEKSLFARLVDKLRFFS
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]