| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961762
Identifier: 157961762
GI number: 157961762
Start: 2353138
End: 2354502
Strand: Direct
Name: 157961762
Synonym: Spea_1939
Alternate gene names: NA
Gene position: 2353138-2354502 (Clockwise)
Preceding gene: 157961761
Following gene: 157961763
Centisome position: 45.47
GC content: 44.69
Gene sequence:
>1365_bases ATGAATAAACTTGCGATGTTGCCTGTAGCAGTGATGATAGCGTTAAGTGCATCAAGTGCTTTGGCTAAGGTTTCTGATGC AGATGCTGCTAAATTAGGTACAGAGTTAACTCCACTTGGTGGTGAAAAGGCCGCTAATGCCGATGGTTCTATTCCAGCAT GGGATGGTGGGATCACTAAACCTGTGGCTGGTTACAGTAAAGGAATGCATCATCCGGATCCTTTTCCTAGCGACAAAATT GAATTTACCATTACCAATGCCAATAAAGATAAATACAAAGAGTATCTTTCAGATGGTCAGATAAAACTGTTTGAGCTATA CCCTGAAACGTTCAAGATGAATGTGTACCAAACACGTCGCTCAGCTTCAGTGCCTCAGTTTGTTTATGATGCAACCAAAG AGAACGCAACTCGTGCGGAGCTTATCGATGGTGGCAACGGTATTAAAGGTGCATCTATTGGTATTCCATTCCCTATGCCT GAAAATGGCCTAGAAGTTATTTGGAACCATGTATTACGTTTCCGCGGTGTTGACCTTAAAACCTCTCGTAGCCAAGCAGC ACCAACTGCCGGTGGTAGCTATACCTTGGTTGAAACCACTGAAGAACTCCGTTTTCAGTATTCTCGCCCAGAGATGACGT TAGATAAGCTGAGTAAAGACAACACTCTGTTCTTCTTTAAGCAAGTTGTTACTCAGCCCGCGCGTCTAGCGGGTACTGCT TTGTTAGTTAAAGAGACAATGGATCAAGAGAAGCTACCACGTCAAGCATGGACTTATAACACGGGGCAGCGCCGCGTACG TAAGGCACCCAATGTGGCATTTGACACCCCAGGTACCGTTTCTGATGGCCTAAGAACAACCGATGATTTCGATATGTTTA ACGGCTCACCAGTACGTTACAACTGGGAGTTAGTGGGTAAGCAAGAGCTTTATATCCCTTATAACGACTACAAGTTGCAC TCTGATAAGCTTGAGTATGAGCAGATCATCACTCCTGGCCACATCAACCCTGAATATGTTCGTTATGAAAAACACCGTGT TTGGGTAGTAAAAGCGACGCTTAAAGACGGCATGCGCCATATCTATAAGGCGCGTACTTTCTACATTGATGAAGACTCTT GGCAGGTGTCTGTTGCCGATCTTTACGATAACCGAGATGAACTCTATCGAGTGGCGATAGCCCATGGCTTGAACTATTAC GAAGTGCCTACCCAGTGGAGTACATTAGAAGTGTTCCATGATCTGCAGTCTCGTCGTTATATTGCGATGGGTCTAGATAA TGAAGGCCGTATGTATGACTTCGATGCGAAATTAAGTGAAGCAAACTTTACTCCAGCGGCATTACGCCGTGCAGGTATTC GTTAA
Upstream 100 bases:
>100_bases ACTTTCTTCGGTGGAGTAGGGACAACCAATGCGATGGCTGACCGAGATTACGTTTCGTTCAACATTAAATATTCAATCTA AAATCACAAGGACAATAACA
Downstream 100 bases:
>100_bases ACCCACTTGTTGAGGGGCTCGGGCCCCTCTTTCATTTTTTTAAGGAAGTCTGTATGTCGTTTAGCATGCTTCGATTTATC TCAACATTGAGTATATTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MNKLAMLPVAVMIALSASSALAKVSDADAAKLGTELTPLGGEKAANADGSIPAWDGGITKPVAGYSKGMHHPDPFPSDKI EFTITNANKDKYKEYLSDGQIKLFELYPETFKMNVYQTRRSASVPQFVYDATKENATRAELIDGGNGIKGASIGIPFPMP ENGLEVIWNHVLRFRGVDLKTSRSQAAPTAGGSYTLVETTEELRFQYSRPEMTLDKLSKDNTLFFFKQVVTQPARLAGTA LLVKETMDQEKLPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRYNWELVGKQELYIPYNDYKLH SDKLEYEQIITPGHINPEYVRYEKHRVWVVKATLKDGMRHIYKARTFYIDEDSWQVSVADLYDNRDELYRVAIAHGLNYY EVPTQWSTLEVFHDLQSRRYIAMGLDNEGRMYDFDAKLSEANFTPAALRRAGIR
Sequences:
>Translated_454_residues MNKLAMLPVAVMIALSASSALAKVSDADAAKLGTELTPLGGEKAANADGSIPAWDGGITKPVAGYSKGMHHPDPFPSDKI EFTITNANKDKYKEYLSDGQIKLFELYPETFKMNVYQTRRSASVPQFVYDATKENATRAELIDGGNGIKGASIGIPFPMP ENGLEVIWNHVLRFRGVDLKTSRSQAAPTAGGSYTLVETTEELRFQYSRPEMTLDKLSKDNTLFFFKQVVTQPARLAGTA LLVKETMDQEKLPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRYNWELVGKQELYIPYNDYKLH SDKLEYEQIITPGHINPEYVRYEKHRVWVVKATLKDGMRHIYKARTFYIDEDSWQVSVADLYDNRDELYRVAIAHGLNYY EVPTQWSTLEVFHDLQSRRYIAMGLDNEGRMYDFDAKLSEANFTPAALRRAGIR >Mature_454_residues MNKLAMLPVAVMIALSASSALAKVSDADAAKLGTELTPLGGEKAANADGSIPAWDGGITKPVAGYSKGMHHPDPFPSDKI EFTITNANKDKYKEYLSDGQIKLFELYPETFKMNVYQTRRSASVPQFVYDATKENATRAELIDGGNGIKGASIGIPFPMP ENGLEVIWNHVLRFRGVDLKTSRSQAAPTAGGSYTLVETTEELRFQYSRPEMTLDKLSKDNTLFFFKQVVTQPARLAGTA LLVKETMDQEKLPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRYNWELVGKQELYIPYNDYKLH SDKLEYEQIITPGHINPEYVRYEKHRVWVVKATLKDGMRHIYKARTFYIDEDSWQVSVADLYDNRDELYRVAIAHGLNYY EVPTQWSTLEVFHDLQSRRYIAMGLDNEGRMYDFDAKLSEANFTPAALRRAGIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010752 [H]
Pfam domain/function: PF07044 DUF1329 [H]
EC number: NA
Molecular weight: Translated: 51353; Mature: 51353
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLAMLPVAVMIALSASSALAKVSDADAAKLGTELTPLGGEKAANADGSIPAWDGGITK CCCHHHHHHHHHHHHHCHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVAGYSKGMHHPDPFPSDKIEFTITNANKDKYKEYLSDGQIKLFELYPETFKMNVYQTRR CCCHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCHHEEEHHHHHC SASVPQFVYDATKENATRAELIDGGNGIKGASIGIPFPMPENGLEVIWNHVLRFRGVDLK CCCCCHHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC TSRSQAAPTAGGSYTLVETTEELRFQYSRPEMTLDKLSKDNTLFFFKQVVTQPARLAGTA CCCCCCCCCCCCCEEEEECHHHHHEEECCCCCHHHHCCCCCEEEHHHHHHCCCHHHHHHH LLVKETMDQEKLPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRY HHHHHHHCHHHCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE NWELVGKQELYIPYNDYKLHSDKLEYEQIITPGHINPEYVRYEKHRVWVVKATLKDGMRH EEEEECCEEEEEECCCCEECCCCCCHHHCCCCCCCCHHHEEEECCEEEEEEEHHHHHHHH IYKARTFYIDEDSWQVSVADLYDNRDELYRVAIAHGLNYYEVPTQWSTLEVFHDLQSRRY HHHHEEEEEECCCCEEEEHHHHCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCEE IAMGLDNEGRMYDFDAKLSEANFTPAALRRAGIR EEEEECCCCCEEEECCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure MNKLAMLPVAVMIALSASSALAKVSDADAAKLGTELTPLGGEKAANADGSIPAWDGGITK CCCHHHHHHHHHHHHHCHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVAGYSKGMHHPDPFPSDKIEFTITNANKDKYKEYLSDGQIKLFELYPETFKMNVYQTRR CCCHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCHHEEEHHHHHC SASVPQFVYDATKENATRAELIDGGNGIKGASIGIPFPMPENGLEVIWNHVLRFRGVDLK CCCCCHHHHHHCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC TSRSQAAPTAGGSYTLVETTEELRFQYSRPEMTLDKLSKDNTLFFFKQVVTQPARLAGTA CCCCCCCCCCCCCEEEEECHHHHHEEECCCCCHHHHCCCCCEEEHHHHHHCCCHHHHHHH LLVKETMDQEKLPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPVRY HHHHHHHCHHHCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE NWELVGKQELYIPYNDYKLHSDKLEYEQIITPGHINPEYVRYEKHRVWVVKATLKDGMRH EEEEECCEEEEEECCCCEECCCCCCHHHCCCCCCCCHHHEEEECCEEEEEEEHHHHHHHH IYKARTFYIDEDSWQVSVADLYDNRDELYRVAIAHGLNYYEVPTQWSTLEVFHDLQSRRY HHHHEEEEEECCCCEEEEHHHHCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCEE IAMGLDNEGRMYDFDAKLSEANFTPAALRRAGIR EEEEECCCCCEEEECCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]