| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961761
Identifier: 157961761
GI number: 157961761
Start: 2351070
End: 2353118
Strand: Direct
Name: 157961761
Synonym: Spea_1938
Alternate gene names: NA
Gene position: 2351070-2353118 (Clockwise)
Preceding gene: 157961760
Following gene: 157961762
Centisome position: 45.43
GC content: 44.85
Gene sequence:
>2049_bases ATGAAAAAGGTAAAAAAAGGCTTTAATAAGTCGACGCTCGCTTTGGGGATAGTTGCGGCGCTCGGTTTTGGCATAACAAA CCAAGCTAACGCAGTCTCATTCAATTGGGGTGAAGTGGAAGGAACATTTGACTCGACTTGGACTGCTGGTGCAAGTTGGC GTGTTGAAGGCAGAGATTGGGACAACCAAATTGGTAAGGTAAACCACCCTCGTTTCGATTGGTCTGGCTACTCGGCTTTT GGCGATACCAAGTACAGCTCAGCTGAGATCTGGGCACAACCTGGATCTTACTCGAGCAATGGTGACCTAAGTAACTTGCT GTACTCTCAGGGGGACACCACATCAGAGATTGTTAAAGGTCTTCATGAGTTGTCATTGAAATACCAAAATTTTGGCCTGT TTGCACGTGGCATGTATTTCTATGATCGCAAACTCAACGATGGTGATTTTGGTTTTAATGACCCGTTAACGGGACAAGAG TTTGACCCTTGCGCCGATAGCAAGGCATCGGAAGTCCAGTGTAAAGACATCCGTTTATTGGATGCTTTTGTATATGCTGA TTTCGATTTTAACGATGGTGCTAATCCACTTTCTATCCGTGTCGGTAATCAGGTTGTCTCTTGGGGAGAAAGCACCTTGA TTGCACACGGTATAGGTGTAATTAACCCCGTCGATTTGAACATTCTTAATGCCCCTGGTGCCGAACTGAAAGAAGCCTTT AGGCCGCAAGGTATGGTGTGGGCATCATTTGGCGTGACAGATAATTTATCTGTTGAAGGTTTTTATCAATATGATTGGGA GCCGGTTTGGGTTCCAACTCCGGGGTCAATTTTCTCAACTAATGATTTTGCCGGTTACGGTGGTTACAACCAAAACGCAC AGTTAGGTTTTAACTCTAATCCTGATATGAATCTCGATTTCTTGCTATCTGAATATAATACCCTTGTGGGTATGGTGGGG TCTGGGCAGGTTGATTCAGTCGATTTAGCTAGACTTGCATTGGCTTATCCGACGAAAGCAACTTTGGTTGAAGATCCTGC TTCTGCAAGTGATGACGGTCAATGGGGTGTAAAACTTGGTTATTATGCGCCTCAATTGGGCGAGACCGAGTTTGGTTTGT ATTACATGAACTACCATAGTCGTCGTCCACTAATCAGCGGTACTACGGCTAACTTTAACGAAGATGCAATAGCCCGCGAT TTACAACGTCTTGGTGGTAAAGCGCAATCTGGCGAAGCCATGACTCGCGAAGATATTTTAGCCTTAGAGACATTCTCTAA AGCACAGATTGTTTACCCTGAAGATATTCAATTGATGGGCTTTAGTTTTAATACGTTAGTCGGTGACACATCTGTTGCGG GGGAAATTGCCCATCGATTGGATGAACCACTGCAGATTGATGATGTTGAATTACTCTTTGCCGCAATGCCGCAGCAACTC GCTAATGCGGGTTTAAACCCAGAATTTGATGGAATTTCACAAGTCGAAAACTACGGTCCTGGCGAATATGCTGAAGGCTT TATTCGTTTAGATACCACTCAGGCTCAGACAACCTTTACTCACCTATTTGGGCCTACATTAGGTACCGATAACCTGACTA TGCTGGCTGAAGTCGGTGGTGTATGGATCCACGATATGCCAAGTCATGATGAGTTGAGACTGAACGGTCCAGGCACTTCT CGTTCGGGCGGTAACCCTGATATGCCAGGTATTATCGAAGCCGTTCATAACGGTCCAGAAACCAACCCATTCCCAACTGA TTTTGCGTGGGGATATCGTTTAGTAGCTAAAGCTGACTACAACAACGTATGGGGCGGTGTAAACATTGCACCTCGAGTCA TTTTCTCCCATGACGTTGATGGTATTACACCAGATCCAATGTTCCTGTTTACTGAAGGCAAGAAGTCAGTCGCTTTAGGC GTTAATTTCGATTATCAGAGTCGTTGGGCCGCAGATCTCTCATACAATACTTTCTTCGGTGGAGTAGGGACAACCAATGC GATGGCTGACCGAGATTACGTTTCGTTCAACATTAAATATTCAATCTAA
Upstream 100 bases:
>100_bases GTATAAATGCTGTAACAATGGTGTCACCTGTAAGTTAACAGAATGTTGGCTACTAATTCCTATAACAAAAGAATCCAGCA GGTTACGGAGAGAAGCTAAA
Downstream 100 bases:
>100_bases AATCACAAGGACAATAACAATGAATAAACTTGCGATGTTGCCTGTAGCAGTGATGATAGCGTTAAGTGCATCAAGTGCTT TGGCTAAGGTTTCTGATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 682; Mature: 682
Protein sequence:
>682_residues MKKVKKGFNKSTLALGIVAALGFGITNQANAVSFNWGEVEGTFDSTWTAGASWRVEGRDWDNQIGKVNHPRFDWSGYSAF GDTKYSSAEIWAQPGSYSSNGDLSNLLYSQGDTTSEIVKGLHELSLKYQNFGLFARGMYFYDRKLNDGDFGFNDPLTGQE FDPCADSKASEVQCKDIRLLDAFVYADFDFNDGANPLSIRVGNQVVSWGESTLIAHGIGVINPVDLNILNAPGAELKEAF RPQGMVWASFGVTDNLSVEGFYQYDWEPVWVPTPGSIFSTNDFAGYGGYNQNAQLGFNSNPDMNLDFLLSEYNTLVGMVG SGQVDSVDLARLALAYPTKATLVEDPASASDDGQWGVKLGYYAPQLGETEFGLYYMNYHSRRPLISGTTANFNEDAIARD LQRLGGKAQSGEAMTREDILALETFSKAQIVYPEDIQLMGFSFNTLVGDTSVAGEIAHRLDEPLQIDDVELLFAAMPQQL ANAGLNPEFDGISQVENYGPGEYAEGFIRLDTTQAQTTFTHLFGPTLGTDNLTMLAEVGGVWIHDMPSHDELRLNGPGTS RSGGNPDMPGIIEAVHNGPETNPFPTDFAWGYRLVAKADYNNVWGGVNIAPRVIFSHDVDGITPDPMFLFTEGKKSVALG VNFDYQSRWAADLSYNTFFGGVGTTNAMADRDYVSFNIKYSI
Sequences:
>Translated_682_residues MKKVKKGFNKSTLALGIVAALGFGITNQANAVSFNWGEVEGTFDSTWTAGASWRVEGRDWDNQIGKVNHPRFDWSGYSAF GDTKYSSAEIWAQPGSYSSNGDLSNLLYSQGDTTSEIVKGLHELSLKYQNFGLFARGMYFYDRKLNDGDFGFNDPLTGQE FDPCADSKASEVQCKDIRLLDAFVYADFDFNDGANPLSIRVGNQVVSWGESTLIAHGIGVINPVDLNILNAPGAELKEAF RPQGMVWASFGVTDNLSVEGFYQYDWEPVWVPTPGSIFSTNDFAGYGGYNQNAQLGFNSNPDMNLDFLLSEYNTLVGMVG SGQVDSVDLARLALAYPTKATLVEDPASASDDGQWGVKLGYYAPQLGETEFGLYYMNYHSRRPLISGTTANFNEDAIARD LQRLGGKAQSGEAMTREDILALETFSKAQIVYPEDIQLMGFSFNTLVGDTSVAGEIAHRLDEPLQIDDVELLFAAMPQQL ANAGLNPEFDGISQVENYGPGEYAEGFIRLDTTQAQTTFTHLFGPTLGTDNLTMLAEVGGVWIHDMPSHDELRLNGPGTS RSGGNPDMPGIIEAVHNGPETNPFPTDFAWGYRLVAKADYNNVWGGVNIAPRVIFSHDVDGITPDPMFLFTEGKKSVALG VNFDYQSRWAADLSYNTFFGGVGTTNAMADRDYVSFNIKYSI >Mature_682_residues MKKVKKGFNKSTLALGIVAALGFGITNQANAVSFNWGEVEGTFDSTWTAGASWRVEGRDWDNQIGKVNHPRFDWSGYSAF GDTKYSSAEIWAQPGSYSSNGDLSNLLYSQGDTTSEIVKGLHELSLKYQNFGLFARGMYFYDRKLNDGDFGFNDPLTGQE FDPCADSKASEVQCKDIRLLDAFVYADFDFNDGANPLSIRVGNQVVSWGESTLIAHGIGVINPVDLNILNAPGAELKEAF RPQGMVWASFGVTDNLSVEGFYQYDWEPVWVPTPGSIFSTNDFAGYGGYNQNAQLGFNSNPDMNLDFLLSEYNTLVGMVG SGQVDSVDLARLALAYPTKATLVEDPASASDDGQWGVKLGYYAPQLGETEFGLYYMNYHSRRPLISGTTANFNEDAIARD LQRLGGKAQSGEAMTREDILALETFSKAQIVYPEDIQLMGFSFNTLVGDTSVAGEIAHRLDEPLQIDDVELLFAAMPQQL ANAGLNPEFDGISQVENYGPGEYAEGFIRLDTTQAQTTFTHLFGPTLGTDNLTMLAEVGGVWIHDMPSHDELRLNGPGTS RSGGNPDMPGIIEAVHNGPETNPFPTDFAWGYRLVAKADYNNVWGGVNIAPRVIFSHDVDGITPDPMFLFTEGKKSVALG VNFDYQSRWAADLSYNTFFGGVGTTNAMADRDYVSFNIKYSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74667; Mature: 74667
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVKKGFNKSTLALGIVAALGFGITNQANAVSFNWGEVEGTFDSTWTAGASWRVEGRDW CCHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEECCCEEEECCCCC DNQIGKVNHPRFDWSGYSAFGDTKYSSAEIWAQPGSYSSNGDLSNLLYSQGDTTSEIVKG CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHH LHELSLKYQNFGLFARGMYFYDRKLNDGDFGFNDPLTGQEFDPCADSKASEVQCKDIRLL HHHHHEEECCCCEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEE DAFVYADFDFNDGANPLSIRVGNQVVSWGESTLIAHGIGVINPVDLNILNAPGAELKEAF EEEEEEEECCCCCCCEEEEEECCEEECCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHH RPQGMVWASFGVTDNLSVEGFYQYDWEPVWVPTPGSIFSTNDFAGYGGYNQNAQLGFNSN CCCCEEEEECCCCCCCCCCEEEEECCEEEEECCCCCEEECCCCCCCCCCCCCCEECCCCC PDMNLDFLLSEYNTLVGMVGSGQVDSVDLARLALAYPTKATLVEDPASASDDGQWGVKLG CCCCHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEE YYAPQLGETEFGLYYMNYHSRRPLISGTTANFNEDAIARDLQRLGGKAQSGEAMTREDIL CCCCCCCCCEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHEE ALETFSKAQIVYPEDIQLMGFSFNTLVGDTSVAGEIAHRLDEPLQIDDVELLFAAMPQQL EEECCCCEEEECCCCEEEEEEEHHHEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ANAGLNPEFDGISQVENYGPGEYAEGFIRLDTTQAQTTFTHLFGPTLGTDNLTMLAEVGG HHCCCCCCCCCHHHHHCCCCCHHCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCC VWIHDMPSHDELRLNGPGTSRSGGNPDMPGIIEAVHNGPETNPFPTDFAWGYRLVAKADY EEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC NNVWGGVNIAPRVIFSHDVDGITPDPMFLFTEGKKSVALGVNFDYQSRWAADLSYNTFFG CCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEECCCCCCEEECCCCCEEEC GVGTTNAMADRDYVSFNIKYSI CCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure MKKVKKGFNKSTLALGIVAALGFGITNQANAVSFNWGEVEGTFDSTWTAGASWRVEGRDW CCHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEECCCEEEECCCCC DNQIGKVNHPRFDWSGYSAFGDTKYSSAEIWAQPGSYSSNGDLSNLLYSQGDTTSEIVKG CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHH LHELSLKYQNFGLFARGMYFYDRKLNDGDFGFNDPLTGQEFDPCADSKASEVQCKDIRLL HHHHHEEECCCCEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEE DAFVYADFDFNDGANPLSIRVGNQVVSWGESTLIAHGIGVINPVDLNILNAPGAELKEAF EEEEEEEECCCCCCCEEEEEECCEEECCCCCEEEECCCCCCCCCCEEEECCCCHHHHHHH RPQGMVWASFGVTDNLSVEGFYQYDWEPVWVPTPGSIFSTNDFAGYGGYNQNAQLGFNSN CCCCEEEEECCCCCCCCCCEEEEECCEEEEECCCCCEEECCCCCCCCCCCCCCEECCCCC PDMNLDFLLSEYNTLVGMVGSGQVDSVDLARLALAYPTKATLVEDPASASDDGQWGVKLG CCCCHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEE YYAPQLGETEFGLYYMNYHSRRPLISGTTANFNEDAIARDLQRLGGKAQSGEAMTREDIL CCCCCCCCCEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHEE ALETFSKAQIVYPEDIQLMGFSFNTLVGDTSVAGEIAHRLDEPLQIDDVELLFAAMPQQL EEECCCCEEEECCCCEEEEEEEHHHEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ANAGLNPEFDGISQVENYGPGEYAEGFIRLDTTQAQTTFTHLFGPTLGTDNLTMLAEVGG HHCCCCCCCCCHHHHHCCCCCHHCCCEEEEECCCHHHHHHHHHCCCCCCCCEEEEEECCC VWIHDMPSHDELRLNGPGTSRSGGNPDMPGIIEAVHNGPETNPFPTDFAWGYRLVAKADY EEEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCC NNVWGGVNIAPRVIFSHDVDGITPDPMFLFTEGKKSVALGVNFDYQSRWAADLSYNTFFG CCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCEEEEEEECCCCCCEEECCCCCEEEC GVGTTNAMADRDYVSFNIKYSI CCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA