| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ccp [H]
Identifier: 157961701
GI number: 157961701
Start: 2288240
End: 2289232
Strand: Reverse
Name: ccp [H]
Synonym: Spea_1877
Alternate gene names: 157961701
Gene position: 2289232-2288240 (Counterclockwise)
Preceding gene: 157961702
Following gene: 157961698
Centisome position: 44.24
GC content: 46.63
Gene sequence:
>993_bases ATGAATAAGCTTAGTTTACTGTCCATCGCGCTACTTTCGACATTATCTGTCGGTGTAAATGCCGCTAACGAACCTATTGA AATCATCCCTGCGGCGGTTATCACTAACCATGAGAAAGTAGAACTTGGAAAGATGTTATTCTTTGAACCAAGATTATCAA AATCAGGCTTCATTTCTTGTAACTCTTGCCACAACTTATCTACCGGTGGCGTGGATGCACTGCCAACATCTATTGGTCAT AACTGGCAAGAAGGCCCTATTAACTCTCCAACCGTGCTAAATGCCGAATATGGCCTAGCACAGTTCTGGGATGGCCGAGC TAAAGATCTTAAAGAACAAGCAGGTGGGCCGATTGCCAACCCGAAAGAGATGGGCTTTAGTCATGAGTTAGCTGTCGATA CCGTACGCTCTATGCCTGCGTATCAAGCACGCTTCGAAAAAGTCTATGACTCGAAAGAAGTCAGCATCGATATGATCACC GATGCGATTGCTGAGTTTGAAAAAACCTTAGTCACTCCGAATGCACCATTCGATCTGTATCTTCAAGGTGACAAAGCTGC GATTAGCGACCAAGCTAAGGCCGGTTATCAATTGTTTAAAGACAAAGGCTGCGTGAGCTGTCATAACGGCCCAGCAGTGG GCGGCACCATGTATATGAAGATGGGACTGGTTAAGCCATTCCATACAAATAATCCAGCGACTGGCAGAAAAGGCGTGACA GGTAAGGAAGCCGATAAGTTTGTATTCAAAGTGCCTACGCTACGTAACATCGAGCTGACCTATCCGTACTTCCACGACGG CAGTGTTTGGGATCTCGAAGAAGCGGTTAACACCATGGCTGACATTCAGCTTGGGCAAAAACTGTCGGATAAAGAAGTGA AAGAGATGGTGGCATTCCTCAACTCTCTAACTGGTGAGCAACCACAAATCGTGCTGCCTATCCTACCGCCATCGAACAAG AACACGCCCCGCCCTGTTCCTTTCGAGGACTAA
Upstream 100 bases:
>100_bases TAGTCTTAATCGAAACAAAGCGTTATATTATTATTCAAAAGCTCATTATTATTGCCTCATAAATTAACCCTACAAACTGC AATGTTTACTTGAGGCCATT
Downstream 100 bases:
>100_bases ATCAAGCTTGTATCATCAGTAAACAGAAAGAGCCGCTAAATGCGGCTCTTTCTGTTTAAGTTCTTGTGTCTAAGCTCTTT TGTTTAAGCTCTTCTGCCTA
Product: cytochrome-c peroxidase
Products: NA
Alternate protein names: Cytochrome c peroxidase [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MNKLSLLSIALLSTLSVGVNAANEPIEIIPAAVITNHEKVELGKMLFFEPRLSKSGFISCNSCHNLSTGGVDALPTSIGH NWQEGPINSPTVLNAEYGLAQFWDGRAKDLKEQAGGPIANPKEMGFSHELAVDTVRSMPAYQARFEKVYDSKEVSIDMIT DAIAEFEKTLVTPNAPFDLYLQGDKAAISDQAKAGYQLFKDKGCVSCHNGPAVGGTMYMKMGLVKPFHTNNPATGRKGVT GKEADKFVFKVPTLRNIELTYPYFHDGSVWDLEEAVNTMADIQLGQKLSDKEVKEMVAFLNSLTGEQPQIVLPILPPSNK NTPRPVPFED
Sequences:
>Translated_330_residues MNKLSLLSIALLSTLSVGVNAANEPIEIIPAAVITNHEKVELGKMLFFEPRLSKSGFISCNSCHNLSTGGVDALPTSIGH NWQEGPINSPTVLNAEYGLAQFWDGRAKDLKEQAGGPIANPKEMGFSHELAVDTVRSMPAYQARFEKVYDSKEVSIDMIT DAIAEFEKTLVTPNAPFDLYLQGDKAAISDQAKAGYQLFKDKGCVSCHNGPAVGGTMYMKMGLVKPFHTNNPATGRKGVT GKEADKFVFKVPTLRNIELTYPYFHDGSVWDLEEAVNTMADIQLGQKLSDKEVKEMVAFLNSLTGEQPQIVLPILPPSNK NTPRPVPFED >Mature_330_residues MNKLSLLSIALLSTLSVGVNAANEPIEIIPAAVITNHEKVELGKMLFFEPRLSKSGFISCNSCHNLSTGGVDALPTSIGH NWQEGPINSPTVLNAEYGLAQFWDGRAKDLKEQAGGPIANPKEMGFSHELAVDTVRSMPAYQARFEKVYDSKEVSIDMIT DAIAEFEKTLVTPNAPFDLYLQGDKAAISDQAKAGYQLFKDKGCVSCHNGPAVGGTMYMKMGLVKPFHTNNPATGRKGVT GKEADKFVFKVPTLRNIELTYPYFHDGSVWDLEEAVNTMADIQLGQKLSDKEVKEMVAFLNSLTGEQPQIVLPILPPSNK NTPRPVPFED
Specific function: Unknown
COG id: COG1858
COG function: function code P; Cytochrome c peroxidase
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789935, Length=287, Percent_Identity=47.3867595818815, Blast_Score=252, Evalue=2e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR004852 [H]
Pfam domain/function: PF03150 CCP_MauG; PF00034 Cytochrom_C [H]
EC number: =1.11.1.5 [H]
Molecular weight: Translated: 36031; Mature: 36031
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLSLLSIALLSTLSVGVNAANEPIEIIPAAVITNHEKVELGKMLFFEPRLSKSGFISC CCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHCCCCHHHHCCEEEECCCCCCCCCEEE NSCHNLSTGGVDALPTSIGHNWQEGPINSPTVLNAEYGLAQFWDGRAKDLKEQAGGPIAN CCCCCCCCCCCHHCCHHHCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHHHHCCCCCCC PKEMGFSHELAVDTVRSMPAYQARFEKVYDSKEVSIDMITDAIAEFEKTLVTPNAPFDLY HHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE LQGDKAAISDQAKAGYQLFKDKGCVSCHNGPAVGGTMYMKMGLVKPFHTNNPATGRKGVT ECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC GKEADKFVFKVPTLRNIELTYPYFHDGSVWDLEEAVNTMADIQLGQKLSDKEVKEMVAFL CCCCCCEEEECCCCCEEEEECCEECCCCEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NSLTGEQPQIVLPILPPSNKNTPRPVPFED HHHCCCCCEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNKLSLLSIALLSTLSVGVNAANEPIEIIPAAVITNHEKVELGKMLFFEPRLSKSGFISC CCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHCCCCHHHHCCEEEECCCCCCCCCEEE NSCHNLSTGGVDALPTSIGHNWQEGPINSPTVLNAEYGLAQFWDGRAKDLKEQAGGPIAN CCCCCCCCCCCHHCCHHHCCCCCCCCCCCCEEEECCCCHHHHCCCHHHHHHHHCCCCCCC PKEMGFSHELAVDTVRSMPAYQARFEKVYDSKEVSIDMITDAIAEFEKTLVTPNAPFDLY HHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE LQGDKAAISDQAKAGYQLFKDKGCVSCHNGPAVGGTMYMKMGLVKPFHTNNPATGRKGVT ECCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC GKEADKFVFKVPTLRNIELTYPYFHDGSVWDLEEAVNTMADIQLGQKLSDKEVKEMVAFL CCCCCCEEEECCCCCEEEEECCEECCCCEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NSLTGEQPQIVLPILPPSNKNTPRPVPFED HHHCCCCCEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12700255; 8163487 [H]