| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is melA [H]
Identifier: 157961697
GI number: 157961697
Start: 2283981
End: 2285021
Strand: Reverse
Name: melA [H]
Synonym: Spea_1873
Alternate gene names: 157961697
Gene position: 2285021-2283981 (Counterclockwise)
Preceding gene: 157961698
Following gene: 157961693
Centisome position: 44.16
GC content: 43.32
Gene sequence:
>1041_bases ATGGCAAGCGAACAAAACCCACTGGGTCTACTCGGTATCGAATTCACTGAGTTTGCAACACCCGAACAAGACTTTATGCA TCAGGTCTTTATTGATTTCGGCTTTTCATTGTTGAAAAAGTCAAAGTCCAAAGAGATTTTGTACTACAAACAAAACGATA TTAACTTTCTATTGAATACCGAACGTAAAGGGTTTTCAGCAGAGTTTGCCAAGAGCCATGGTCCGGCAATATGTTCAATG GGCTGGCGTGTAGAAGACGCCCAATTTGCGTTCGAAAATGCCGTTGCTCGTGGTGCAAAACCTGCAGATGATGCAGCAAA AGATATGCCTTACCCTGCAATTTATGGCATTGGCGATAGCTTAATTTACTTTATCGATACCTTCGGCGAAAACGATAATA TCTATGCCACAGATTTTGACGATCTAGACGAGCAAGTTATTGTTGAGGAGAAAGGCTTTATCGAAGTCGACCACCTTACC AACAATGTCTACAAAGGCACCATGGAGTACTGGTCAAATTTCTATAAAGATATCTTTGGCTTTACCGAAGTGCGTTACTT TGACATTAAAGGCTCGCAAACCGCGCTTATCTCTTACGCGCTGCGCTCACCCGATGGCAGCTTCTGTATTCCGATCAACG AAGGTAAAGGCAACGACAAAAATCAGATTGATGAATACTTACGTGAATACGACGGTCCAGGTGTACAGCACCTTGCCTTT AGAAGCCGCGATATTGTTGGTTCACTCGATGCGATGGAAGGCACATCGATTCAAACCTTAGATATTATTCCTGAGTATTA CGACACCATTTTCGACAAGTTGCCACAGGTAACCGAAGATCGTGACCGCATTAAGCATCACCAAATTCTGGTCGACGGCG ATGAAGATGGTTACCTACTGCAGATCTTTACTAAGAATCTTTTTGGGCCAATTTTTATCGAGATCATCCAGCGTAAAAAT AATCTCGGCTTCGGTGAAGGTAACTTTACCGCACTGTTTGAGTCGATTGAGCGTGATCAAAAGCGCCGTGGCGTGCTTTA A
Upstream 100 bases:
>100_bases TTGAAAGCTAACAAAACGATTTTTCAAGACTTTAAGCCATCATCAGAAGCCATCGACAGAGTGGCTGGTATGTAGCAACA AATTGACAGAGGATATAACA
Downstream 100 bases:
>100_bases ATAGTAGATAAAGCAATTCACCACAGAGGACACGAAGCTCACGGAGAAAAGCAACAACCAAGGTCTAGTAGACTCTTTAC CTTGGCATTCTTTGTGTTCT
Product: 4-hydroxyphenylpyruvate dioxygenase
Products: homogentisate; CO2
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MASEQNPLGLLGIEFTEFATPEQDFMHQVFIDFGFSLLKKSKSKEILYYKQNDINFLLNTERKGFSAEFAKSHGPAICSM GWRVEDAQFAFENAVARGAKPADDAAKDMPYPAIYGIGDSLIYFIDTFGENDNIYATDFDDLDEQVIVEEKGFIEVDHLT NNVYKGTMEYWSNFYKDIFGFTEVRYFDIKGSQTALISYALRSPDGSFCIPINEGKGNDKNQIDEYLREYDGPGVQHLAF RSRDIVGSLDAMEGTSIQTLDIIPEYYDTIFDKLPQVTEDRDRIKHHQILVDGDEDGYLLQIFTKNLFGPIFIEIIQRKN NLGFGEGNFTALFESIERDQKRRGVL
Sequences:
>Translated_346_residues MASEQNPLGLLGIEFTEFATPEQDFMHQVFIDFGFSLLKKSKSKEILYYKQNDINFLLNTERKGFSAEFAKSHGPAICSM GWRVEDAQFAFENAVARGAKPADDAAKDMPYPAIYGIGDSLIYFIDTFGENDNIYATDFDDLDEQVIVEEKGFIEVDHLT NNVYKGTMEYWSNFYKDIFGFTEVRYFDIKGSQTALISYALRSPDGSFCIPINEGKGNDKNQIDEYLREYDGPGVQHLAF RSRDIVGSLDAMEGTSIQTLDIIPEYYDTIFDKLPQVTEDRDRIKHHQILVDGDEDGYLLQIFTKNLFGPIFIEIIQRKN NLGFGEGNFTALFESIERDQKRRGVL >Mature_345_residues ASEQNPLGLLGIEFTEFATPEQDFMHQVFIDFGFSLLKKSKSKEILYYKQNDINFLLNTERKGFSAEFAKSHGPAICSMG WRVEDAQFAFENAVARGAKPADDAAKDMPYPAIYGIGDSLIYFIDTFGENDNIYATDFDDLDEQVIVEEKGFIEVDHLTN NVYKGTMEYWSNFYKDIFGFTEVRYFDIKGSQTALISYALRSPDGSFCIPINEGKGNDKNQIDEYLREYDGPGVQHLAFR SRDIVGSLDAMEGTSIQTLDIIPEYYDTIFDKLPQVTEDRDRIKHHQILVDGDEDGYLLQIFTKNLFGPIFIEIIQRKNN LGFGEGNFTALFESIERDQKRRGVL
Specific function: Unknown
COG id: COG3185
COG function: function code ER; 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4HPPD family [H]
Homologues:
Organism=Homo sapiens, GI285002264, Length=335, Percent_Identity=28.6567164179104, Blast_Score=122, Evalue=7e-28, Organism=Homo sapiens, GI4504477, Length=335, Percent_Identity=28.6567164179104, Blast_Score=121, Evalue=8e-28, Organism=Homo sapiens, GI14249394, Length=212, Percent_Identity=26.8867924528302, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17555220, Length=203, Percent_Identity=39.4088669950739, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17550752, Length=210, Percent_Identity=37.6190476190476, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI21356105, Length=301, Percent_Identity=33.5548172757475, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI24667510, Length=301, Percent_Identity=33.5548172757475, Blast_Score=135, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005956 - InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: 1.13.11.27
Molecular weight: Translated: 39527; Mature: 39395
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASEQNPLGLLGIEFTEFATPEQDFMHQVFIDFGFSLLKKSKSKEILYYKQNDINFLLNT CCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEC ERKGFSAEFAKSHGPAICSMGWRVEDAQFAFENAVARGAKPADDAAKDMPYPAIYGIGDS CCCCCCHHHHHCCCCEEEECCCEECHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEECCCC LIYFIDTFGENDNIYATDFDDLDEQVIVEEKGFIEVDHLTNNVYKGTMEYWSNFYKDIFG EEEEEEECCCCCCEEECCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC FTEVRYFDIKGSQTALISYALRSPDGSFCIPINEGKGNDKNQIDEYLREYDGPGVQHLAF CCEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHH RSRDIVGSLDAMEGTSIQTLDIIPEYYDTIFDKLPQVTEDRDRIKHHQILVDGDEDGYLL HCCCHHCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCEEEEECCCCCEEE QIFTKNLFGPIFIEIIQRKNNLGFGEGNFTALFESIERDQKRRGVL EEEHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure ASEQNPLGLLGIEFTEFATPEQDFMHQVFIDFGFSLLKKSKSKEILYYKQNDINFLLNT CCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEC ERKGFSAEFAKSHGPAICSMGWRVEDAQFAFENAVARGAKPADDAAKDMPYPAIYGIGDS CCCCCCHHHHHCCCCEEEECCCEECHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEECCCC LIYFIDTFGENDNIYATDFDDLDEQVIVEEKGFIEVDHLTNNVYKGTMEYWSNFYKDIFG EEEEEEECCCCCCEEECCCCCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC FTEVRYFDIKGSQTALISYALRSPDGSFCIPINEGKGNDKNQIDEYLREYDGPGVQHLAF CCEEEEEECCCCCEEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHH RSRDIVGSLDAMEGTSIQTLDIIPEYYDTIFDKLPQVTEDRDRIKHHQILVDGDEDGYLL HCCCHHCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCEEEEECCCCCEEE QIFTKNLFGPIFIEIIQRKNNLGFGEGNFTALFESIERDQKRRGVL EEEHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxyphenylpyruvate; O2
Specific reaction: 4-hydroxyphenylpyruvate + O2 = homogentisate + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1756973 [H]