| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961678
Identifier: 157961678
GI number: 157961678
Start: 2256000
End: 2256611
Strand: Reverse
Name: 157961678
Synonym: Spea_1854
Alternate gene names: NA
Gene position: 2256611-2256000 (Counterclockwise)
Preceding gene: 157961681
Following gene: 157961675
Centisome position: 43.61
GC content: 47.22
Gene sequence:
>612_bases TTGAGCTCATTACCCTACTCTCAATCTTGTGAAAATAACAGAACTGCCATCGCCGCCGTGTTAGAGCGCAGCTTTGCCCA AGTCAGACATGTGCTAGAGGTTGGCAGTGGTACGGGTCAGCATGCGGTACACTTTGCCAAGTTGCTACCACACCTTATCT GGCAAACCAGCGATCAACTCGACTACCATGATGGGATCAATGCTTGGATAGCCGCAGAGCCCAGCACTAATTTACGTGCG CCGCTGGTACTTGATGTCACTAAGCCATGGCCGATAACACAGTTCGAACCTGCAGTTGTTGATGGTATTTTTAGTGCTAA TACTTTACATATCATGTCGAAAGGGATGGTCGAGGCTTTCTTTGCAGGGATTGGAAAACACTTAGCTAAGGGCGGCCATT TCTGCGTCTATGGCCCATTTAACTATAATGGGGAATATACTAGCGATAGCAATCGTAATTTCGACCAATGGTTACTGCAG CAAAACCCACAAAGTGCCATCCGTGATATCGAATGGATAAGTGAGCTTGCTGCGACGCAAGGCTTGGAGTTAATCGAAGA TCACCCCATGCCTGCCAATAACCGCTTGCTTCATTTCGAGAAAAAACGCTAA
Upstream 100 bases:
>100_bases CTAGATAGTAGCGCCTTTTGTCGGCAACACCTAGCAAGGGTTGAATTCATTCAGTAGACGCGGTAAAACAGTGGCTTAAC CCAAAAATGAAGACGCTATT
Downstream 100 bases:
>100_bases AAGCTAAAGCATTTAGCCACCATCTTAACTCGGATTAATGGTCTTATCGGTGAGTAATAGTCTTAATTCGCATAACGAAC TCACCTGATAGTGAGGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MSSLPYSQSCENNRTAIAAVLERSFAQVRHVLEVGSGTGQHAVHFAKLLPHLIWQTSDQLDYHDGINAWIAAEPSTNLRA PLVLDVTKPWPITQFEPAVVDGIFSANTLHIMSKGMVEAFFAGIGKHLAKGGHFCVYGPFNYNGEYTSDSNRNFDQWLLQ QNPQSAIRDIEWISELAATQGLELIEDHPMPANNRLLHFEKKR
Sequences:
>Translated_203_residues MSSLPYSQSCENNRTAIAAVLERSFAQVRHVLEVGSGTGQHAVHFAKLLPHLIWQTSDQLDYHDGINAWIAAEPSTNLRA PLVLDVTKPWPITQFEPAVVDGIFSANTLHIMSKGMVEAFFAGIGKHLAKGGHFCVYGPFNYNGEYTSDSNRNFDQWLLQ QNPQSAIRDIEWISELAATQGLELIEDHPMPANNRLLHFEKKR >Mature_202_residues SSLPYSQSCENNRTAIAAVLERSFAQVRHVLEVGSGTGQHAVHFAKLLPHLIWQTSDQLDYHDGINAWIAAEPSTNLRAP LVLDVTKPWPITQFEPAVVDGIFSANTLHIMSKGMVEAFFAGIGKHLAKGGHFCVYGPFNYNGEYTSDSNRNFDQWLLQQ NPQSAIRDIEWISELAATQGLELIEDHPMPANNRLLHFEKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=201, Percent_Identity=35.8208955223881, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI71998087, Length=199, Percent_Identity=32.1608040201005, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI28574095, Length=176, Percent_Identity=34.0909090909091, Blast_Score=100, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22738; Mature: 22607
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPYSQSCENNRTAIAAVLERSFAQVRHVLEVGSGTGQHAVHFAKLLPHLIWQTSDQL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC DYHDGINAWIAAEPSTNLRAPLVLDVTKPWPITQFEPAVVDGIFSANTLHIMSKGMVEAF CCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH FAGIGKHLAKGGHFCVYGPFNYNGEYTSDSNRNFDQWLLQQNPQSAIRDIEWISELAATQ HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHC GLELIEDHPMPANNRLLHFEKKR CCHHHHCCCCCCCCCEEEEECCC >Mature Secondary Structure SSLPYSQSCENNRTAIAAVLERSFAQVRHVLEVGSGTGQHAVHFAKLLPHLIWQTSDQL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC DYHDGINAWIAAEPSTNLRAPLVLDVTKPWPITQFEPAVVDGIFSANTLHIMSKGMVEAF CCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH FAGIGKHLAKGGHFCVYGPFNYNGEYTSDSNRNFDQWLLQQNPQSAIRDIEWISELAATQ HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHC GLELIEDHPMPANNRLLHFEKKR CCHHHHCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA