Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yeiJ [C]

Identifier: 157961541

GI number: 157961541

Start: 2088632

End: 2089894

Strand: Reverse

Name: yeiJ [C]

Synonym: Spea_1717

Alternate gene names: 157961541

Gene position: 2089894-2088632 (Counterclockwise)

Preceding gene: 157961542

Following gene: 157961540

Centisome position: 40.39

GC content: 45.76

Gene sequence:

>1263_bases
ATGATGTTCATGGGATTTATCGGCATGCTAGTGCTTTTAGGCATAGGCTTCGCGTGCTCAGTTAGTCGACGTTCAATTAA
ACTACGTACAGTTGGTGCGGCACTAGGCTTACAAGTGTTAATTGGTGCGTTTGTACTCTATGTACCAGTTGGTCGCCAAG
CACTTGAATCTATGTCTCACGGCGTGCATGTGGTGCTTGATAGCGGTAAAGCGGGTATTCGCTTCCTATTTGGCAATCTA
GTTAACTTCTCGGTTGAAGGGATAGGCTTTGTATTTGCACTTAACGTGCTGCCATTAGTAGTGTTCTTCTCAGCCCTAAT
TGCTGTGCTTTACTATCTTGGCATTATGCAGTTTATCATCCGTATCATTGGTGGTGGCATGGCTAAACTTCTAGGCACCT
CACAGCCTGAGTCTATGTCTGCAGTGTCTAATATTTTCGTCGGTCAAAGTGAAGCACCACTCGTAATTAAGCCTTATATG
GCGAAGATGAGCGACTCTGAGTTCTTCGCTGTTATGTGCGGTGGTATGGCATCCGTTTCAGGCACTGTACTTGCTGGCTA
CGCCATGATGGGCGTTGATATGGAATACCTACTTGCTGCATCATTTATGGCAGCTCCTGGTGGTGTTCTGTTTGCTAAGT
TAATCCTTCCTGAAACTAGCACTCCGACCTACACAATGGATAGCAAGATTCAATTTGATGAGAAGCCTCCGGTAAACGTA
TTAGCGGCAGCAGGCGAAGGCGCAGCGAGTGGTCTTAAACTTGCGGCGGCTATCGGTGCGATGTTAATCGCTATGATTGG
TCTGGTTACTCTGGTGAATAACCTACTAGGCGGTTTTGGTGACATGGTCGGCCTACAACTGTCTCTTGAAGGGATCTTAG
GCTGGATCTTTGCACCGTTAGCCTTTTTACTAGGTGTTCCAGCTGCCGATATGGCCATTGCTGGATCTATGATTGGAAAG
AAGCTTATCGTCAACGAGTTTGTTGCCTACAGTGATCTTGCTCCATACCTAAAAGACTCAACAGAAGTGACTGCAGCAGG
ACTGCAAGTACTTCAAGAAAAGAGTAAAGTTATTATTAGCTTTGCACTGTGTGGCTTTGCAAACTTAGCTTCTATGGGGA
TCTTAATTGGCGGACTAGGTACATTGTGTCCATCAAGAACAGACTTCATCGCCAAGTACGGCTTACGCACCGTAGTTGCT
GCGACTTGCTCTAACTTAATGAGTGCTGCGATTGCAGGTATATTCTTCTCTTTAGCCAATTAA

Upstream 100 bases:

>100_bases
ATGAGCAAACTCTTAAGTGTGCAAAACTGGCTGAAAGTGACTTCTTACAGCTAATCAATGCATTCGTCGATAGCGTTAAG
AAAGCGTAGAGGATAGGACT

Downstream 100 bases:

>100_bases
GCCATAGGCTAATGTAAGTTAAGGGCGGAATTCCGCCCTTTTTTATTGAAGGTTTAAAAATGTTTAAGTCCGCTTTGCCA
CACCTACAGATGTTAATCTT

Product: nucleoside transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MMFMGFIGMLVLLGIGFACSVSRRSIKLRTVGAALGLQVLIGAFVLYVPVGRQALESMSHGVHVVLDSGKAGIRFLFGNL
VNFSVEGIGFVFALNVLPLVVFFSALIAVLYYLGIMQFIIRIIGGGMAKLLGTSQPESMSAVSNIFVGQSEAPLVIKPYM
AKMSDSEFFAVMCGGMASVSGTVLAGYAMMGVDMEYLLAASFMAAPGGVLFAKLILPETSTPTYTMDSKIQFDEKPPVNV
LAAAGEGAASGLKLAAAIGAMLIAMIGLVTLVNNLLGGFGDMVGLQLSLEGILGWIFAPLAFLLGVPAADMAIAGSMIGK
KLIVNEFVAYSDLAPYLKDSTEVTAAGLQVLQEKSKVIISFALCGFANLASMGILIGGLGTLCPSRTDFIAKYGLRTVVA
ATCSNLMSAAIAGIFFSLAN

Sequences:

>Translated_420_residues
MMFMGFIGMLVLLGIGFACSVSRRSIKLRTVGAALGLQVLIGAFVLYVPVGRQALESMSHGVHVVLDSGKAGIRFLFGNL
VNFSVEGIGFVFALNVLPLVVFFSALIAVLYYLGIMQFIIRIIGGGMAKLLGTSQPESMSAVSNIFVGQSEAPLVIKPYM
AKMSDSEFFAVMCGGMASVSGTVLAGYAMMGVDMEYLLAASFMAAPGGVLFAKLILPETSTPTYTMDSKIQFDEKPPVNV
LAAAGEGAASGLKLAAAIGAMLIAMIGLVTLVNNLLGGFGDMVGLQLSLEGILGWIFAPLAFLLGVPAADMAIAGSMIGK
KLIVNEFVAYSDLAPYLKDSTEVTAAGLQVLQEKSKVIISFALCGFANLASMGILIGGLGTLCPSRTDFIAKYGLRTVVA
ATCSNLMSAAIAGIFFSLAN
>Mature_420_residues
MMFMGFIGMLVLLGIGFACSVSRRSIKLRTVGAALGLQVLIGAFVLYVPVGRQALESMSHGVHVVLDSGKAGIRFLFGNL
VNFSVEGIGFVFALNVLPLVVFFSALIAVLYYLGIMQFIIRIIGGGMAKLLGTSQPESMSAVSNIFVGQSEAPLVIKPYM
AKMSDSEFFAVMCGGMASVSGTVLAGYAMMGVDMEYLLAASFMAAPGGVLFAKLILPETSTPTYTMDSKIQFDEKPPVNV
LAAAGEGAASGLKLAAAIGAMLIAMIGLVTLVNNLLGGFGDMVGLQLSLEGILGWIFAPLAFLLGVPAADMAIAGSMIGK
KLIVNEFVAYSDLAPYLKDSTEVTAAGLQVLQEKSKVIISFALCGFANLASMGILIGGLGTLCPSRTDFIAKYGLRTVVA
ATCSNLMSAAIAGIFFSLAN

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI42542381, Length=418, Percent_Identity=37.799043062201, Blast_Score=284, Evalue=9e-77,
Organism=Homo sapiens, GI227116277, Length=416, Percent_Identity=34.8557692307692, Blast_Score=270, Evalue=2e-72,
Organism=Homo sapiens, GI11545853, Length=379, Percent_Identity=39.3139841688654, Blast_Score=260, Evalue=2e-69,
Organism=Escherichia coli, GI1788485, Length=418, Percent_Identity=45.933014354067, Blast_Score=356, Evalue=1e-99,
Organism=Escherichia coli, GI1788488, Length=418, Percent_Identity=46.88995215311, Blast_Score=346, Evalue=1e-96,
Organism=Escherichia coli, GI1788737, Length=400, Percent_Identity=30.75, Blast_Score=164, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI17560276, Length=401, Percent_Identity=32.9177057356608, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI71991794, Length=417, Percent_Identity=32.1342925659472, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI25146537, Length=211, Percent_Identity=31.2796208530806, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI45552519, Length=401, Percent_Identity=37.4064837905237, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI45552517, Length=401, Percent_Identity=37.4064837905237, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI19921868, Length=401, Percent_Identity=37.4064837905237, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI281360430, Length=412, Percent_Identity=34.9514563106796, Blast_Score=220, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 43711; Mature: 43711

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFMGFIGMLVLLGIGFACSVSRRSIKLRTVGAALGLQVLIGAFVLYVPVGRQALESMSH
CHHHHHHHHHHHHHCCHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
GVHVVLDSGKAGIRFLFGNLVNFSVEGIGFVFALNVLPLVVFFSALIAVLYYLGIMQFII
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIIGGGMAKLLGTSQPESMSAVSNIFVGQSEAPLVIKPYMAKMSDSEFFAVMCGGMASVS
HHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCEEEEECCCHHHCC
GTVLAGYAMMGVDMEYLLAASFMAAPGGVLFAKLILPETSTPTYTMDSKIQFDEKPPVNV
HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECCCEECCCCCCCEE
LAAAGEGAASGLKLAAAIGAMLIAMIGLVTLVNNLLGGFGDMVGLQLSLEGILGWIFAPL
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLLGVPAADMAIAGSMIGKKLIVNEFVAYSDLAPYLKDSTEVTAAGLQVLQEKSKVIIS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FALCGFANLASMGILIGGLGTLCPSRTDFIAKYGLRTVVAATCSNLMSAAIAGIFFSLAN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMFMGFIGMLVLLGIGFACSVSRRSIKLRTVGAALGLQVLIGAFVLYVPVGRQALESMSH
CHHHHHHHHHHHHHCCHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
GVHVVLDSGKAGIRFLFGNLVNFSVEGIGFVFALNVLPLVVFFSALIAVLYYLGIMQFII
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIIGGGMAKLLGTSQPESMSAVSNIFVGQSEAPLVIKPYMAKMSDSEFFAVMCGGMASVS
HHHCCCHHHHHCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCEEEEECCCHHHCC
GTVLAGYAMMGVDMEYLLAASFMAAPGGVLFAKLILPETSTPTYTMDSKIQFDEKPPVNV
HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEECCCEECCCCCCCEE
LAAAGEGAASGLKLAAAIGAMLIAMIGLVTLVNNLLGGFGDMVGLQLSLEGILGWIFAPL
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLLGVPAADMAIAGSMIGKKLIVNEFVAYSDLAPYLKDSTEVTAAGLQVLQEKSKVIIS
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
FALCGFANLASMGILIGGLGTLCPSRTDFIAKYGLRTVVAATCSNLMSAAIAGIFFSLAN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]