Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961529

Identifier: 157961529

GI number: 157961529

Start: 2070754

End: 2070954

Strand: Reverse

Name: 157961529

Synonym: Spea_1704

Alternate gene names: NA

Gene position: 2070954-2070754 (Counterclockwise)

Preceding gene: 157961532

Following gene: 157961528

Centisome position: 40.02

GC content: 47.26

Gene sequence:

>201_bases
TTGCCAAGGTGTTACAAGCTAGCTCGCGCTGGTCGTATTGAAGAAGCGCGTGAAATCTACCCTTGGTTTATGCCACTACT
ACGTCTAGATACTATCCCGACGCTAGTTCAATGTATCAAGTTTGCAGAGCAAATCGTTGGCCGAGGTAGCGAAAACGTAC
GTCTACCTCGTCTTACACTTATCGGTGAAGAGCGTGCATAA

Upstream 100 bases:

>100_bases
CAAAAGGGTTTCAATTTGAACACATGCGTATACAATATACCAATCAACGCCTAACTCCAAACGCTGCATAGCAGTAATAG
AGGCTTAATATAAAAGTGAA

Downstream 100 bases:

>100_bases
GTTCAGCAAGTGATTGCTCATGCACTTGAGGCTCGCATCGATTTAGACACGTACAACATCGACTAATTAAAGTTTGATGT
TTATAAAGCCAGCCGTTTAA

Product: dihydrodipicolinate synthase

Products: dihydrodipicolinate; H2O

Alternate protein names: Dihydrodipicolinate Synthase; Dihydrodipicolinate Synthetase Family Protein; Dihydrodipicolinate Synthase Subfamily; Dihydrodipicolinate Synthase Family Protein; Dihydroxydipicolinate Synthetase Protein; 1-Pyrroline-4-Hydroxy-2-Carboxylate Deaminase

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MPRCYKLARAGRIEEAREIYPWFMPLLRLDTIPTLVQCIKFAEQIVGRGSENVRLPRLTLIGEERA

Sequences:

>Translated_66_residues
MPRCYKLARAGRIEEAREIYPWFMPLLRLDTIPTLVQCIKFAEQIVGRGSENVRLPRLTLIGEERA
>Mature_65_residues
PRCYKLARAGRIEEAREIYPWFMPLLRLDTIPTLVQCIKFAEQIVGRGSENVRLPRLTLIGEERA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.2.1.52

Molecular weight: Translated: 7686; Mature: 7555

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRCYKLARAGRIEEAREIYPWFMPLLRLDTIPTLVQCIKFAEQIVGRGSENVRLPRLTL
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
IGEERA
CCCCCC
>Mature Secondary Structure 
PRCYKLARAGRIEEAREIYPWFMPLLRLDTIPTLVQCIKFAEQIVGRGSENVRLPRLTL
CHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
IGEERA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate 4-semialdehyde; pyruvate

Specific reaction: L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA