| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is fabH2 [H]
Identifier: 157961525
GI number: 157961525
Start: 2066038
End: 2067102
Strand: Reverse
Name: fabH2 [H]
Synonym: Spea_1700
Alternate gene names: 157961525
Gene position: 2067102-2066038 (Counterclockwise)
Preceding gene: 157961526
Following gene: 157961511
Centisome position: 39.95
GC content: 47.23
Gene sequence:
>1065_bases ATGCAGTACGCCACTATTACTGGTTGGGGAAAGTGTGTTCCGCCTGCCACCCTAACAAACCATGATCTTGCCACTTTTAT TGAAACCTCAGACGAGTGGATCAAACCGCGCACAGGCATTAGCCAAAGACACATTAGCCACGTTGATACGTCGGCTTTGG CCTCTGTTGCCGCCAAACGAGCACTCGCAGCAGCGGGGATCGATGGTAGTGAACTAGATATGATTATTCTTGCCACGGCG ACCCCAGATACCCTGATCCCGAATATTGCTTCTACCGTACAGGCTGAAGTGGGTGCAACCTGTGCAGCTTTTGATATCAA CGCCGCCTGTAGTGGCTTTTTATATGGCCTAGGCTTAGGTAGTTCACAGATCAAGAGCGGTCAGTGTAAGAAAGTACTTG TGATCGGTGCCGAGCGTCTTTCATTTTTCTTAGACTGGTCTCGTCGCGACACTGCCGTACTTTTCGGTGATGGCGCTGGC GCTGTCGTGCTAGAAGCAACTGACGAAGCGATTGGTGTATTGGGTTATGAGCTAAATAACGACCCAGATGGCCGTGATAT CCTTAAAGCTGGATTTGGTACGGCTATGGATAGATTTGAAGCTTCATCTTTAGATTTCTACATAGAATTTAACGGTCAAG AGATCTTTAAACGCGCTATCGCAGGCATGGGTAAGTTAAGCGCTAAAGTTATCGAAAAGTGCGGTATCGATAAAGAAGAG ATCGATTGGGTTATTCCTCATCAGGCGAACGAGCGTATTATCGATACGTTAATTAGCCGCATGAAGATCCCGAAAGAGAA AGCGGTTGTGAACATAGCCAACTACGGTAACACCTCTGCAGCGACCATTCCGATTGCAATCTGTGACGCCCTAGAGCAAG GTAAAATTCAACCTAACCAAACTATTCTATCTTGTGCATTTGGTGCAGGTCTAACGTCTGCTGCGGCATTGATTAAATGG GGTGACAGAGTCACACCAATTAATACTAGCGATGCAGAGCTACCTCCTTGTGATAAAACAGGTATTGAGCTCGTCGCGAA AGCGGTTAAGCATTTCTGCGGCTAA
Upstream 100 bases:
>100_bases CTCACAGTTTGATTAGCATGATTTTTGCTAAACTTCACTTATACAGATCCCATAAGGCAGAGCTCAGGTTCTGCCTTTTT AATTGATAGAGAATACCTAG
Downstream 100 bases:
>100_bases CGTTATAGTTTGCATTGCATTAATAAAAAAACACCGAGTCATATCGGTGTTTTTTTATGGGCGTTTAACGCTGACTTAAT GTAATTTAATGCCAATCAGT
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III protein 2; Beta-ketoacyl-ACP synthase III 2; KAS III 2 [H]
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MQYATITGWGKCVPPATLTNHDLATFIETSDEWIKPRTGISQRHISHVDTSALASVAAKRALAAAGIDGSELDMIILATA TPDTLIPNIASTVQAEVGATCAAFDINAACSGFLYGLGLGSSQIKSGQCKKVLVIGAERLSFFLDWSRRDTAVLFGDGAG AVVLEATDEAIGVLGYELNNDPDGRDILKAGFGTAMDRFEASSLDFYIEFNGQEIFKRAIAGMGKLSAKVIEKCGIDKEE IDWVIPHQANERIIDTLISRMKIPKEKAVVNIANYGNTSAATIPIAICDALEQGKIQPNQTILSCAFGAGLTSAAALIKW GDRVTPINTSDAELPPCDKTGIELVAKAVKHFCG
Sequences:
>Translated_354_residues MQYATITGWGKCVPPATLTNHDLATFIETSDEWIKPRTGISQRHISHVDTSALASVAAKRALAAAGIDGSELDMIILATA TPDTLIPNIASTVQAEVGATCAAFDINAACSGFLYGLGLGSSQIKSGQCKKVLVIGAERLSFFLDWSRRDTAVLFGDGAG AVVLEATDEAIGVLGYELNNDPDGRDILKAGFGTAMDRFEASSLDFYIEFNGQEIFKRAIAGMGKLSAKVIEKCGIDKEE IDWVIPHQANERIIDTLISRMKIPKEKAVVNIANYGNTSAATIPIAICDALEQGKIQPNQTILSCAFGAGLTSAAALIKW GDRVTPINTSDAELPPCDKTGIELVAKAVKHFCG >Mature_354_residues MQYATITGWGKCVPPATLTNHDLATFIETSDEWIKPRTGISQRHISHVDTSALASVAAKRALAAAGIDGSELDMIILATA TPDTLIPNIASTVQAEVGATCAAFDINAACSGFLYGLGLGSSQIKSGQCKKVLVIGAERLSFFLDWSRRDTAVLFGDGAG AVVLEATDEAIGVLGYELNNDPDGRDILKAGFGTAMDRFEASSLDFYIEFNGQEIFKRAIAGMGKLSAKVIEKCGIDKEE IDWVIPHQANERIIDTLISRMKIPKEKAVVNIANYGNTSAATIPIAICDALEQGKIQPNQTILSCAFGAGLTSAAALIKW GDRVTPINTSDAELPPCDKTGIELVAKAVKHFCG
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=321, Percent_Identity=35.8255451713396, Blast_Score=211, Evalue=8e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 37564; Mature: 37564
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYATITGWGKCVPPATLTNHDLATFIETSDEWIKPRTGISQRHISHVDTSALASVAAKR CCEEEECCCCCCCCCCCCCCCCHHHEEECCHHHCCCCCCCCHHHHHHCCHHHHHHHHHHH ALAAAGIDGSELDMIILATATPDTLIPNIASTVQAEVGATCAAFDINAACSGFLYGLGLG HHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCC SSQIKSGQCKKVLVIGAERLSFFLDWSRRDTAVLFGDGAGAVVLEATDEAIGVLGYELNN HHHCCCCCCCEEEEEEHHHHEEEEECCCCCCEEEEECCCCEEEEEECCCEEEEEEEECCC DPDGRDILKAGFGTAMDRFEASSLDFYIEFNGQEIFKRAIAGMGKLSAKVIEKCGIDKEE CCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHCCCHHH IDWVIPHQANERIIDTLISRMKIPKEKAVVNIANYGNTSAATIPIAICDALEQGKIQPNQ CCEECCCCCCHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCH TILSCAFGAGLTSAAALIKWGDRVTPINTSDAELPPCDKTGIELVAKAVKHFCG HEEEEHHCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MQYATITGWGKCVPPATLTNHDLATFIETSDEWIKPRTGISQRHISHVDTSALASVAAKR CCEEEECCCCCCCCCCCCCCCCHHHEEECCHHHCCCCCCCCHHHHHHCCHHHHHHHHHHH ALAAAGIDGSELDMIILATATPDTLIPNIASTVQAEVGATCAAFDINAACSGFLYGLGLG HHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHCCCCC SSQIKSGQCKKVLVIGAERLSFFLDWSRRDTAVLFGDGAGAVVLEATDEAIGVLGYELNN HHHCCCCCCCEEEEEEHHHHEEEEECCCCCCEEEEECCCCEEEEEECCCEEEEEEEECCC DPDGRDILKAGFGTAMDRFEASSLDFYIEFNGQEIFKRAIAGMGKLSAKVIEKCGIDKEE CCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCHHHHHHHHHHHCCCHHH IDWVIPHQANERIIDTLISRMKIPKEKAVVNIANYGNTSAATIPIAICDALEQGKIQPNQ CCEECCCCCCHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCH TILSCAFGAGLTSAAALIKWGDRVTPINTSDAELPPCDKTGIELVAKAVKHFCG HEEEEHHCCCHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]