| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961522
Identifier: 157961522
GI number: 157961522
Start: 2062596
End: 2064443
Strand: Direct
Name: 157961522
Synonym: Spea_1697
Alternate gene names: NA
Gene position: 2062596-2064443 (Clockwise)
Preceding gene: 157961521
Following gene: 157961523
Centisome position: 39.86
GC content: 46.1
Gene sequence:
>1848_bases ATGGATGCCAGTGAATTACAGCCTATTTTACAGTTCTTACAACAAAGAGTGCCGTTTGATTCTCTAAATGCTGGGGCGTT ATCACGCTGCTGTCATGGCTTGACTATAGGTTATTACAGTAAAGCCTCCAGTTTTGTTCCGCTAGATCCCGCTAACCCTC AGCTTTATATTGTCCGTAGTGGTGCATTTGAGGTTCGTGACAGAAATGGCGAGCTACTCGATAGGTTAGGAGAAGGCGAC TATTTCGGATTTCCATCGCTTTTGTCTGGCGAAGAGGCCAGTAATCGGGTCGCTATCTTAGAAGATGGTCTGGTGTATCA CCTGCCACCGGTTATATTTGATTTTTTGCGTCAGGAGAGCCGCGAATTTGATCGGTTCTTTAATCGTGCCTTTGCCAAGA GACTGCGTCATCAGGGACGATTTAAGGCTAAAGAGCTCACCACGACGAGCAGAGTCTCGACGCTTATGTCTAAGTCGCCG CAGACCATAGACATGAAGGCCAGTGTGGCGCAGGCTAGTCGATTAATGCGTACCTCTCGAGTCTCATCTGTGTTAGTTAT TGATAATAACAAGCTGGTGGGGATCTTAACCGATAGGGATTTGCGTAACCGTGTATTGGCCGAAAACCACGATGGTAGCC TACCCGTACATCAGGCTATGACGACCACACCTGTGTCGATAGAGTCGAACTCATTGGTGTTCGAGGCCATGTTATTGATG AGCGAGCACAATATTCATCATCTCCCCGTCGTCGATAATGGCGTGACAACGGGGGTGGTAACCAGCACCGATATTCTACG AGGCCAGAGTTCTCAACCTTTATTGCTAATTGGAGAGATAGAGCGGCAAAAAGATCTACAAAGCCTCATTCAAGTCAGTA AGCAAATTCCCCTGCTGCTACAAAACTTAATTAGCGCAGATGCCAGAGCCGAGGAGATAGGAAGGGTGTTAACTTCAGTC ACCGATGCCCTGACAAGGCGTTTAATCGTACTCAATCAACAAATTCTTGGTGAAGCGCCTATGGCTTTTTGTTGGTTAGC TTTTGGTTCGCAAGGAAGGCAAGATCAAGCCGCTTGCTCAGATCAAGACAACGGATTACTGCTTGCCCATGAGCCTGATG AAGCGGCTGAAGGCTACTTTGACGCCTTGTCGCACGCCGTATGTAAAGGCCTAGATGAGTGCGGTTATATCTATTGTCCA GGTGACATCATGGCGCAAAATCCTAAATGGCGCATGTCTCTGGATAAGTGGAAGCAAGTCTTCGAACGCTGGGTCAATAC CCCAGAACCTATGGCCTTGATGCATGCCAGTATCTTCTTTGATATGCGCAGTGTCTATGGCCCGCAAACGCTATTTGATG GCTTACAAGATGCTGTGCTGAGTAACACCAAAGACAATGATATCTTTCTTGCTGGATTAACTGGGAACTCCCTGACAAGC TCACCACCATTAGGATTTTTTAGGAAATTTGTACTAGAAAGAGACGGCAGTGAAGTGAAAGGCATCGATTTAAAACATAA AGGTAATGCGTTGATAACCGATATTGCGCGAGTGTATGCGCTTTCTGCTGGGATTAAAGAGGTCAATACTGCCAAACGCA TCCGGGCCTTAATGGACCAAAGTATCATTAATCGTAAAGATGCGCTTAATTTGGCCGATGCCCATGAGTTTATTGCGCAT ATGCGCTTGTCTAACCAAGGCTACCAATATACTCAATCTTTACCTGTGACTAACTACTTGATGCCTCAGAATCTTTCTTC CTTGGTTAGGCATCAACTAAGGGATGCATTTAAAGTGGTTCACGACGGCCAAGTTGGACTAAAGCTTAAAATGATGCGCA GTTATTAA
Upstream 100 bases:
>100_bases ACTTTTTTACTCATAAACAATCTGGCCTTTAGTCGAATAGAGTAGGCAGGTAAAACCGCGATATAGTGACTTATTACCGT TTAATTGTGGGAGTGGCTTA
Downstream 100 bases:
>100_bases TGGTTAAGAGGTTTATCCATGTAACAAGATTGGGACTATTAATTTAGGTTGTTACTTTGAGAATGGAAAATTTGAGAAAT TTATACTTAAAAACACGACT
Product: CBS domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MDASELQPILQFLQQRVPFDSLNAGALSRCCHGLTIGYYSKASSFVPLDPANPQLYIVRSGAFEVRDRNGELLDRLGEGD YFGFPSLLSGEEASNRVAILEDGLVYHLPPVIFDFLRQESREFDRFFNRAFAKRLRHQGRFKAKELTTTSRVSTLMSKSP QTIDMKASVAQASRLMRTSRVSSVLVIDNNKLVGILTDRDLRNRVLAENHDGSLPVHQAMTTTPVSIESNSLVFEAMLLM SEHNIHHLPVVDNGVTTGVVTSTDILRGQSSQPLLLIGEIERQKDLQSLIQVSKQIPLLLQNLISADARAEEIGRVLTSV TDALTRRLIVLNQQILGEAPMAFCWLAFGSQGRQDQAACSDQDNGLLLAHEPDEAAEGYFDALSHAVCKGLDECGYIYCP GDIMAQNPKWRMSLDKWKQVFERWVNTPEPMALMHASIFFDMRSVYGPQTLFDGLQDAVLSNTKDNDIFLAGLTGNSLTS SPPLGFFRKFVLERDGSEVKGIDLKHKGNALITDIARVYALSAGIKEVNTAKRIRALMDQSIINRKDALNLADAHEFIAH MRLSNQGYQYTQSLPVTNYLMPQNLSSLVRHQLRDAFKVVHDGQVGLKLKMMRSY
Sequences:
>Translated_615_residues MDASELQPILQFLQQRVPFDSLNAGALSRCCHGLTIGYYSKASSFVPLDPANPQLYIVRSGAFEVRDRNGELLDRLGEGD YFGFPSLLSGEEASNRVAILEDGLVYHLPPVIFDFLRQESREFDRFFNRAFAKRLRHQGRFKAKELTTTSRVSTLMSKSP QTIDMKASVAQASRLMRTSRVSSVLVIDNNKLVGILTDRDLRNRVLAENHDGSLPVHQAMTTTPVSIESNSLVFEAMLLM SEHNIHHLPVVDNGVTTGVVTSTDILRGQSSQPLLLIGEIERQKDLQSLIQVSKQIPLLLQNLISADARAEEIGRVLTSV TDALTRRLIVLNQQILGEAPMAFCWLAFGSQGRQDQAACSDQDNGLLLAHEPDEAAEGYFDALSHAVCKGLDECGYIYCP GDIMAQNPKWRMSLDKWKQVFERWVNTPEPMALMHASIFFDMRSVYGPQTLFDGLQDAVLSNTKDNDIFLAGLTGNSLTS SPPLGFFRKFVLERDGSEVKGIDLKHKGNALITDIARVYALSAGIKEVNTAKRIRALMDQSIINRKDALNLADAHEFIAH MRLSNQGYQYTQSLPVTNYLMPQNLSSLVRHQLRDAFKVVHDGQVGLKLKMMRSY >Mature_615_residues MDASELQPILQFLQQRVPFDSLNAGALSRCCHGLTIGYYSKASSFVPLDPANPQLYIVRSGAFEVRDRNGELLDRLGEGD YFGFPSLLSGEEASNRVAILEDGLVYHLPPVIFDFLRQESREFDRFFNRAFAKRLRHQGRFKAKELTTTSRVSTLMSKSP QTIDMKASVAQASRLMRTSRVSSVLVIDNNKLVGILTDRDLRNRVLAENHDGSLPVHQAMTTTPVSIESNSLVFEAMLLM SEHNIHHLPVVDNGVTTGVVTSTDILRGQSSQPLLLIGEIERQKDLQSLIQVSKQIPLLLQNLISADARAEEIGRVLTSV TDALTRRLIVLNQQILGEAPMAFCWLAFGSQGRQDQAACSDQDNGLLLAHEPDEAAEGYFDALSHAVCKGLDECGYIYCP GDIMAQNPKWRMSLDKWKQVFERWVNTPEPMALMHASIFFDMRSVYGPQTLFDGLQDAVLSNTKDNDIFLAGLTGNSLTS SPPLGFFRKFVLERDGSEVKGIDLKHKGNALITDIARVYALSAGIKEVNTAKRIRALMDQSIINRKDALNLADAHEFIAH MRLSNQGYQYTQSLPVTNYLMPQNLSSLVRHQLRDAFKVVHDGQVGLKLKMMRSY
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 68658; Mature: 68658
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDASELQPILQFLQQRVPFDSLNAGALSRCCHGLTIGYYSKASSFVPLDPANPQLYIVRS CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEHHCCCCCCCCCCCCCEEEEEEC GAFEVRDRNGELLDRLGEGDYFGFPSLLSGEEASNRVAILEDGLVYHLPPVIFDFLRQES CCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH REFDRFFNRAFAKRLRHQGRFKAKELTTTSRVSTLMSKSPQTIDMKASVAQASRLMRTSR HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH VSSVLVIDNNKLVGILTDRDLRNRVLAENHDGSLPVHQAMTTTPVSIESNSLVFEAMLLM CCEEEEEECCEEEEEEECCHHHHHHHCCCCCCCCCHHHHHCCCCCEECCCHHHHHHHHHH SEHNIHHLPVVDNGVTTGVVTSTDILRGQSSQPLLLIGEIERQKDLQSLIQVSKQIPLLL HCCCCEECCEECCCCCCCEEECHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH QNLISADARAEEIGRVLTSVTDALTRRLIVLNQQILGEAPMAFCWLAFGSQGRQDQAACS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCC DQDNGLLLAHEPDEAAEGYFDALSHAVCKGLDECGYIYCPGDIMAQNPKWRMSLDKWKQV CCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHCCEEEECCHHHCCCCCCCCCHHHHHHH FERWVNTPEPMALMHASIFFDMRSVYGPQTLFDGLQDAVLSNTKDNDIFLAGLTGNSLTS HHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC SPPLGFFRKFVLERDGSEVKGIDLKHKGNALITDIARVYALSAGIKEVNTAKRIRALMDQ CCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH SIINRKDALNLADAHEFIAHMRLSNQGYQYTQSLPVTNYLMPQNLSSLVRHQLRDAFKVV HHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHH HDGQVGLKLKMMRSY CCCCCCEEEEEECCC >Mature Secondary Structure MDASELQPILQFLQQRVPFDSLNAGALSRCCHGLTIGYYSKASSFVPLDPANPQLYIVRS CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEHHCCCCCCCCCCCCCEEEEEEC GAFEVRDRNGELLDRLGEGDYFGFPSLLSGEEASNRVAILEDGLVYHLPPVIFDFLRQES CCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH REFDRFFNRAFAKRLRHQGRFKAKELTTTSRVSTLMSKSPQTIDMKASVAQASRLMRTSR HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH VSSVLVIDNNKLVGILTDRDLRNRVLAENHDGSLPVHQAMTTTPVSIESNSLVFEAMLLM CCEEEEEECCEEEEEEECCHHHHHHHCCCCCCCCCHHHHHCCCCCEECCCHHHHHHHHHH SEHNIHHLPVVDNGVTTGVVTSTDILRGQSSQPLLLIGEIERQKDLQSLIQVSKQIPLLL HCCCCEECCEECCCCCCCEEECHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH QNLISADARAEEIGRVLTSVTDALTRRLIVLNQQILGEAPMAFCWLAFGSQGRQDQAACS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHCCC DQDNGLLLAHEPDEAAEGYFDALSHAVCKGLDECGYIYCPGDIMAQNPKWRMSLDKWKQV CCCCCEEEEECCCHHHHHHHHHHHHHHHCCHHHCCEEEECCHHHCCCCCCCCCHHHHHHH FERWVNTPEPMALMHASIFFDMRSVYGPQTLFDGLQDAVLSNTKDNDIFLAGLTGNSLTS HHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC SPPLGFFRKFVLERDGSEVKGIDLKHKGNALITDIARVYALSAGIKEVNTAKRIRALMDQ CCCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH SIINRKDALNLADAHEFIAHMRLSNQGYQYTQSLPVTNYLMPQNLSSLVRHQLRDAFKVV HHHHHHHHCCHHHHHHHHHHHHHCCCCCEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHH HDGQVGLKLKMMRSY CCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]