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The map label for this gene is ocd2 [H]

Identifier: 157961436

GI number: 157961436

Start: 1949979

End: 1950920

Strand: Direct

Name: ocd2 [H]

Synonym: Spea_1610

Alternate gene names: 157961436

Gene position: 1949979-1950920 (Clockwise)

Preceding gene: 157961435

Following gene: 157961438

Centisome position: 37.68

GC content: 48.73

Gene sequence:

>942_bases
ATGCAATATTTAAATGAAGCGCAAACCGCAAAACTGATCACTCATCAACTGGCCTACTCAGCTGTTAAAGAAGCGTTTAT
AGCAGCCACCACAGATGAAGCAACTTTGTTTCCTGTGGTCAATGCATCAGGCCCTCAAACCGACTCGATGTTTTCAATGA
AGTCAGCGTCAACGGCGACACTAGTTGGTTGGAAAACGGGGAGTTACTGGCCGGGTAATCAGGCTAAAAACATACCCTGC
CACGGCACCAATGTGTTCTTATTAAGCCCTGAAACCGGTGAGCTGGTTGCTGTAGTTGCAGCCACGCAAGTCAATGCTTA
TCGCACAGCGGCAGCAGACGCAGTTGCAGTCGATTACCTAGCGCGAAAAGAGGCGACTGTATTGACGGTATTTGGCAGTG
GGCACCAAGCAGAGTACGAAGTATTAGCCATCGCGGCAGTGCGTGATATTACTAAGGTGATTGTTGTTGGCCGAGATAAC
GATCGCTGCCAAGCATTCATTAAGCGTCTAGTTGATAAAGGCTTACAAGCAGACTGTACCGTTGCCAGCGCCCAATACGG
TTGCGAAAATGCAGACATTATCGTGACCGCTACCACTGCCACTGCGCCGCTATTTAAGGCTAGCTGGGTTAAAGAGGGCA
CCCATATCTCCGCCATGGGGGCTGATAAAGTCGGTAAACAGGAGTTACCAGTGGAGCTTTATCAAGGCGCCAGTTTATTT
TGTGACTACCGAGCGCAGTCGGTGGTTATTGGCGAATTTCAGCACTCAGAAAATGGGCAAGTGACAGAGATGGGCCACGT
CATAACTAGCCATTCAGCAGGGCGTATTGATAGCGCTGAGATTACTATTTTTGATAGCTCTGGCATCGCTATTCAAGACC
TGTTTGTTGCCGCGAAACTGCTACAGCTGAGTGAAGAGCTAACTGAACGAGTGTTCGATTAA

Upstream 100 bases:

>100_bases
AATCATGGCTGCGCCACAGCCTCCATGCATCAGCACTACCATGTGTTTGATACAGCGAATGAAACCTATGAGATCTGGAA
TCGAATTCAAGGCTGGTAAC

Downstream 100 bases:

>100_bases
TATTAAGGTCAAAGGGCCAGTAGCAATTGCTGCTGGCCTTTATTGTTCATGAATCCTCCGAAAGCTAACATGGAAGAGAC
TAACTCCCACATTGATACTC

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: OCD 2 [H]

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MQYLNEAQTAKLITHQLAYSAVKEAFIAATTDEATLFPVVNASGPQTDSMFSMKSASTATLVGWKTGSYWPGNQAKNIPC
HGTNVFLLSPETGELVAVVAATQVNAYRTAAADAVAVDYLARKEATVLTVFGSGHQAEYEVLAIAAVRDITKVIVVGRDN
DRCQAFIKRLVDKGLQADCTVASAQYGCENADIIVTATTATAPLFKASWVKEGTHISAMGADKVGKQELPVELYQGASLF
CDYRAQSVVIGEFQHSENGQVTEMGHVITSHSAGRIDSAEITIFDSSGIAIQDLFVAAKLLQLSEELTERVFD

Sequences:

>Translated_313_residues
MQYLNEAQTAKLITHQLAYSAVKEAFIAATTDEATLFPVVNASGPQTDSMFSMKSASTATLVGWKTGSYWPGNQAKNIPC
HGTNVFLLSPETGELVAVVAATQVNAYRTAAADAVAVDYLARKEATVLTVFGSGHQAEYEVLAIAAVRDITKVIVVGRDN
DRCQAFIKRLVDKGLQADCTVASAQYGCENADIIVTATTATAPLFKASWVKEGTHISAMGADKVGKQELPVELYQGASLF
CDYRAQSVVIGEFQHSENGQVTEMGHVITSHSAGRIDSAEITIFDSSGIAIQDLFVAAKLLQLSEELTERVFD
>Mature_313_residues
MQYLNEAQTAKLITHQLAYSAVKEAFIAATTDEATLFPVVNASGPQTDSMFSMKSASTATLVGWKTGSYWPGNQAKNIPC
HGTNVFLLSPETGELVAVVAATQVNAYRTAAADAVAVDYLARKEATVLTVFGSGHQAEYEVLAIAAVRDITKVIVVGRDN
DRCQAFIKRLVDKGLQADCTVASAQYGCENADIIVTATTATAPLFKASWVKEGTHISAMGADKVGKQELPVELYQGASLF
CDYRAQSVVIGEFQHSENGQVTEMGHVITSHSAGRIDSAEITIFDSSGIAIQDLFVAAKLLQLSEELTERVFD

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI4503065, Length=235, Percent_Identity=31.4893617021277, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI62241008, Length=235, Percent_Identity=31.4893617021277, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24642678, Length=258, Percent_Identity=26.3565891472868, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: =4.3.1.12 [H]

Molecular weight: Translated: 33507; Mature: 33507

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYLNEAQTAKLITHQLAYSAVKEAFIAATTDEATLFPVVNASGPQTDSMFSMKSASTAT
CCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCCCEEEECCCCCEE
LVGWKTGSYWPGNQAKNIPCHGTNVFLLSPETGELVAVVAATQVNAYRTAAADAVAVDYL
EEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH
ARKEATVLTVFGSGHQAEYEVLAIAAVRDITKVIVVGRDNDRCQAFIKRLVDKGLQADCT
HCCCCEEEEEECCCCCCCEEEEEHHHHHCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEE
VASAQYGCENADIIVTATTATAPLFKASWVKEGTHISAMGADKVGKQELPVELYQGASLF
EEHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHCCCEEE
CDYRAQSVVIGEFQHSENGQVTEMGHVITSHSAGRIDSAEITIFDSSGIAIQDLFVAAKL
EECCCCEEEEEEEECCCCCCEEEHHHEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHH
LQLSEELTERVFD
HHHHHHHHHHHCC
>Mature Secondary Structure
MQYLNEAQTAKLITHQLAYSAVKEAFIAATTDEATLFPVVNASGPQTDSMFSMKSASTAT
CCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCCCEEEECCCCCEE
LVGWKTGSYWPGNQAKNIPCHGTNVFLLSPETGELVAVVAATQVNAYRTAAADAVAVDYL
EEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH
ARKEATVLTVFGSGHQAEYEVLAIAAVRDITKVIVVGRDNDRCQAFIKRLVDKGLQADCT
HCCCCEEEEEECCCCCCCEEEEEHHHHHCCEEEEEEECCCHHHHHHHHHHHHCCCCCCEE
VASAQYGCENADIIVTATTATAPLFKASWVKEGTHISAMGADKVGKQELPVELYQGASLF
EEHHHCCCCCCCEEEEEECCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHCCCEEE
CDYRAQSVVIGEFQHSENGQVTEMGHVITSHSAGRIDSAEITIFDSSGIAIQDLFVAAKL
EECCCCEEEEEEEECCCCCCEEEHHHEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHH
LQLSEELTERVFD
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]