BacMap

Definition	Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession	NC_009901
Length	5,174,581

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The map label for this gene is 157961383

Identifier: 157961383

GI number: 157961383

Start: 1891712

End: 1892545

Strand: Direct

Name: 157961383

Synonym: Spea_1557

Alternate gene names: NA

Gene position: 1891712-1892545 (Clockwise)

Preceding gene: 157961380

Following gene: 157961384

Centisome position: 36.56

GC content: 45.92

Gene sequence:

>834_bases
ATGGCAACAGAGAAAGATCCAGAAAGTTCGTTAAAGCTTAAATTACGCCGGGTAATTTTCGGTACCGATACCCCTGCAGG
GCGTTATTTTGATATCAGTTTAATGGTTTGTATCGTGATGAGTGTGCTGCTCGTCTTTCTTGATACCGTCGCCTCGGTTC
ATGAGCGTTATGGCGATATGATTGTCATTATGGAGTGGGGCTTTACCTTTATTTTTACCATAGAGTACATATTAAGACTC
TACTGCTCGGCCAAGCCACTCAGTTACGCCAGAAGTTTCTATGGCGTGGTCGATCTGTTATCGGTATTACCGACTTATTT
AGCCCTGTTCTTCCCTGGGGCAAGCTTCACCATGGTCATTAGGATCCTACGTCTATTTAGGATTTTTAGGGTGTTGAAAC
TGCTACGCTATTTAAGTGAAGGTAACCTGCTACTGCGTGCCATGATGCAGTCTAGCCGTAAGGTGTTTATCTTCTTTTTC
TCGGTGAGTCTCATCGTTGTGGTGCTCAGCGCGGTGATGTACGTGGTTGAAGGACCTAACAATGGTTTTACCTCGATTCC
TAAGTCGATTTACTGGACCATTGTGACCATCACCACCGTAGGTTATGGTGACATTACTCCGGGCACGCCGCTGGGACAGG
CGATTGCGGCATTTACTATGTTGCTGGGTTACTCGATTATAGCTATCCCGACGGGTATTTTAACCGCCGAGATTTCACAA
GAGATTGGCCGTACGCGAGATTTAAGACGCTGCAGTAACTGCCTGAAAGTTGGTCATGAAAATAATGCGCTCTACTGCGA
TCATTGCGGCAGTGAATTAGAGAGTGAGCTGTAA

Upstream 100 bases:

>100_bases
TGCGTGTCACACTATTCATATCACCAATCTTAAATGCCTTGATAAGTCAGATTAAACTGACCAAATCATCGCTAAATTTT
TGCAAGGATTTGTTGTAAAA

Downstream 100 bases:

>100_bases
AAATACAATTAAAGGATTAGAGGTGTTATGGCTGTAGCCAAGTTTGTACAGGGATCGATTCTGCGCCATATTTTTGTGAT
GAGTTCCACCGCGGCTATCG

Product: Ion transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MATEKDPESSLKLKLRRVIFGTDTPAGRYFDISLMVCIVMSVLLVFLDTVASVHERYGDMIVIMEWGFTFIFTIEYILRL
YCSAKPLSYARSFYGVVDLLSVLPTYLALFFPGASFTMVIRILRLFRIFRVLKLLRYLSEGNLLLRAMMQSSRKVFIFFF
SVSLIVVVLSAVMYVVEGPNNGFTSIPKSIYWTIVTITTVGYGDITPGTPLGQAIAAFTMLLGYSIIAIPTGILTAEISQ
EIGRTRDLRRCSNCLKVGHENNALYCDHCGSELESEL

Sequences:

>Translated_277_residues
MATEKDPESSLKLKLRRVIFGTDTPAGRYFDISLMVCIVMSVLLVFLDTVASVHERYGDMIVIMEWGFTFIFTIEYILRL
YCSAKPLSYARSFYGVVDLLSVLPTYLALFFPGASFTMVIRILRLFRIFRVLKLLRYLSEGNLLLRAMMQSSRKVFIFFF
SVSLIVVVLSAVMYVVEGPNNGFTSIPKSIYWTIVTITTVGYGDITPGTPLGQAIAAFTMLLGYSIIAIPTGILTAEISQ
EIGRTRDLRRCSNCLKVGHENNALYCDHCGSELESEL
>Mature_276_residues
ATEKDPESSLKLKLRRVIFGTDTPAGRYFDISLMVCIVMSVLLVFLDTVASVHERYGDMIVIMEWGFTFIFTIEYILRLY
CSAKPLSYARSFYGVVDLLSVLPTYLALFFPGASFTMVIRILRLFRIFRVLKLLRYLSEGNLLLRAMMQSSRKVFIFFFS
VSLIVVVLSAVMYVVEGPNNGFTSIPKSIYWTIVTITTVGYGDITPGTPLGQAIAAFTMLLGYSIIAIPTGILTAEISQE
IGRTRDLRRCSNCLKVGHENNALYCDHCGSELESEL

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cyclic nucleotide-binding domain [H]

Homologues:

Organism=Homo sapiens, GI20070166, Length=169, Percent_Identity=39.0532544378698, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI27436974, Length=237, Percent_Identity=27.8481012658228, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI27436981, Length=210, Percent_Identity=29.0476190476191, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI27436984, Length=230, Percent_Identity=29.1304347826087, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI27436986, Length=230, Percent_Identity=29.1304347826087, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI9789987, Length=204, Percent_Identity=28.921568627451, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI88758565, Length=230, Percent_Identity=25.2173913043478, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI4826784, Length=231, Percent_Identity=28.1385281385281, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI45383011, Length=187, Percent_Identity=30.4812834224599, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI19424136, Length=231, Percent_Identity=32.4675324675325, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI25952087, Length=246, Percent_Identity=25.2032520325203, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI4504817, Length=204, Percent_Identity=26.9607843137255, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI26638655, Length=231, Percent_Identity=28.1385281385281, Blast_Score=89, Evalue=6e-18,
Organism=Homo sapiens, GI26638653, Length=231, Percent_Identity=28.1385281385281, Blast_Score=88, Evalue=9e-18,
Organism=Homo sapiens, GI27436988, Length=177, Percent_Identity=28.8135593220339, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI13492973, Length=181, Percent_Identity=34.8066298342541, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI25952108, Length=194, Percent_Identity=28.8659793814433, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI26051262, Length=242, Percent_Identity=26.0330578512397, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI26051260, Length=242, Percent_Identity=26.0330578512397, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI26051264, Length=242, Percent_Identity=26.0330578512397, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI5031819, Length=180, Percent_Identity=30, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI25952092, Length=179, Percent_Identity=28.4916201117318, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI119395748, Length=203, Percent_Identity=23.6453201970443, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4504821, Length=190, Percent_Identity=26.8421052631579, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI88758576, Length=180, Percent_Identity=26.6666666666667, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI24497462, Length=180, Percent_Identity=26.6666666666667, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI26051268, Length=234, Percent_Identity=26.4957264957265, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI4826782, Length=200, Percent_Identity=23.5, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI27436993, Length=173, Percent_Identity=28.3236994219653, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI19071574, Length=173, Percent_Identity=28.3236994219653, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI24497458, Length=180, Percent_Identity=27.7777777777778, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI7657289, Length=220, Percent_Identity=28.6363636363636, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI26051266, Length=234, Percent_Identity=26.4957264957265, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI21217561, Length=180, Percent_Identity=27.7777777777778, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI27436996, Length=178, Percent_Identity=28.0898876404494, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI236462242, Length=233, Percent_Identity=26.1802575107296, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI21217563, Length=180, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI236461942, Length=233, Percent_Identity=26.1802575107296, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI236461719, Length=233, Percent_Identity=26.1802575107296, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI236462079, Length=233, Percent_Identity=26.1802575107296, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI28373065, Length=233, Percent_Identity=26.1802575107296, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI4758630, Length=242, Percent_Identity=26.8595041322314, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI163792201, Length=181, Percent_Identity=27.6243093922652, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI4826786, Length=180, Percent_Identity=26.6666666666667, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI24497460, Length=181, Percent_Identity=28.1767955801105, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI32479525, Length=242, Percent_Identity=28.099173553719, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI32479527, Length=242, Percent_Identity=28.099173553719, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI6912444, Length=176, Percent_Identity=25, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17544122, Length=250, Percent_Identity=29.2, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71989369, Length=177, Percent_Identity=36.1581920903955, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71989381, Length=177, Percent_Identity=36.1581920903955, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI71989361, Length=177, Percent_Identity=36.1581920903955, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71989376, Length=177, Percent_Identity=36.1581920903955, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI71994134, Length=182, Percent_Identity=32.4175824175824, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71994313, Length=195, Percent_Identity=35.3846153846154, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI193206869, Length=185, Percent_Identity=31.8918918918919, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI25148255, Length=185, Percent_Identity=31.8918918918919, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71994320, Length=158, Percent_Identity=37.3417721518987, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17569273, Length=176, Percent_Identity=30.1136363636364, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32564088, Length=182, Percent_Identity=30.2197802197802, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI32564076, Length=182, Percent_Identity=30.2197802197802, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI32564084, Length=182, Percent_Identity=30.2197802197802, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI32564082, Length=182, Percent_Identity=30.2197802197802, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI32564086, Length=182, Percent_Identity=30.2197802197802, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI32564090, Length=182, Percent_Identity=30.2197802197802, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI32564080, Length=182, Percent_Identity=30.2197802197802, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI72000220, Length=172, Percent_Identity=31.3953488372093, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115532628, Length=180, Percent_Identity=36.1111111111111, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI71998749, Length=180, Percent_Identity=36.1111111111111, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32564068, Length=179, Percent_Identity=30.1675977653631, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32564072, Length=179, Percent_Identity=30.1675977653631, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32564074, Length=180, Percent_Identity=36.1111111111111, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32564070, Length=179, Percent_Identity=30.1675977653631, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25147238, Length=180, Percent_Identity=31.6666666666667, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25147242, Length=199, Percent_Identity=30.6532663316583, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71985535, Length=216, Percent_Identity=26.8518518518519, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71986003, Length=178, Percent_Identity=31.4606741573034, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71986008, Length=178, Percent_Identity=31.4606741573034, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71986011, Length=178, Percent_Identity=31.4606741573034, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI32564066, Length=238, Percent_Identity=24.7899159663866, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193207406, Length=225, Percent_Identity=27.1111111111111, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71986574, Length=175, Percent_Identity=24.5714285714286, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161084970, Length=218, Percent_Identity=30.7339449541284, Blast_Score=107, Evalue=9e-24,
Organism=Drosophila melanogaster, GI17737641, Length=218, Percent_Identity=30.7339449541284, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24656294, Length=246, Percent_Identity=26.4227642276423, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI116007764, Length=246, Percent_Identity=26.4227642276423, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24656289, Length=246, Percent_Identity=26.4227642276423, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI281365536, Length=246, Percent_Identity=26.4227642276423, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24642914, Length=216, Percent_Identity=26.3888888888889, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24642910, Length=216, Percent_Identity=26.3888888888889, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24642916, Length=216, Percent_Identity=26.3888888888889, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI45555859, Length=216, Percent_Identity=26.3888888888889, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI45549143, Length=216, Percent_Identity=26.3888888888889, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI17136468, Length=183, Percent_Identity=30.0546448087432, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI221330674, Length=183, Percent_Identity=30.0546448087432, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28574020, Length=183, Percent_Identity=30.0546448087432, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI161076829, Length=172, Percent_Identity=30.2325581395349, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI221330119, Length=236, Percent_Identity=25.8474576271186, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI221330117, Length=236, Percent_Identity=25.8474576271186, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI281363095, Length=236, Percent_Identity=25.8474576271186, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI281363097, Length=236, Percent_Identity=25.8474576271186, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR018488
- InterPro:   IPR000595
- InterPro:   IPR005821
- InterPro:   IPR003091
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]

EC number: NA

Molecular weight: Translated: 31124; Mature: 30993

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEKDPESSLKLKLRRVIFGTDTPAGRYFDISLMVCIVMSVLLVFLDTVASVHERYGDM
CCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
IVIMEWGFTFIFTIEYILRLYCSAKPLSYARSFYGVVDLLSVLPTYLALFFPGASFTMVI
EEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RILRLFRIFRVLKLLRYLSEGNLLLRAMMQSSRKVFIFFFSVSLIVVVLSAVMYVVEGPN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCC
NGFTSIPKSIYWTIVTITTVGYGDITPGTPLGQAIAAFTMLLGYSIIAIPTGILTAEISQ
CCCCCCCHHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIGRTRDLRRCSNCLKVGHENNALYCDHCGSELESEL
HHHCHHHHHHHHHHHHCCCCCCEEEHHHCCCHHHCCC
>Mature Secondary Structure 
ATEKDPESSLKLKLRRVIFGTDTPAGRYFDISLMVCIVMSVLLVFLDTVASVHERYGDM
CCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
IVIMEWGFTFIFTIEYILRLYCSAKPLSYARSFYGVVDLLSVLPTYLALFFPGASFTMVI
EEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RILRLFRIFRVLKLLRYLSEGNLLLRAMMQSSRKVFIFFFSVSLIVVVLSAVMYVVEGPN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHCCCC
NGFTSIPKSIYWTIVTITTVGYGDITPGTPLGQAIAAFTMLLGYSIIAIPTGILTAEISQ
CCCCCCCHHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIGRTRDLRRCSNCLKVGHENNALYCDHCGSELESEL
HHHCHHHHHHHHHHHHCCCCCCEEEHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1522059 [H]