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The map label for this gene is yafK [C]

Identifier: 157961382

GI number: 157961382

Start: 1890983

End: 1891498

Strand: Reverse

Name: yafK [C]

Synonym: Spea_1556

Alternate gene names: 157961382

Gene position: 1891498-1890983 (Counterclockwise)

Preceding gene: 157961385

Following gene: 157961381

Centisome position: 36.55

GC content: 49.61

Gene sequence:

>516_bases
ATGCGTTTTATTGTTTTATCGCTCAGTTTGCTGATGCTAATTTCAAGCACCCTTTTTTCAAGCGCCACATTTGCGAGTGC
TATGGCCAGTGGTAAAGCCGACTTAGTGGTGGTGACCAAGTCTGAAGCAAGCATGGCAATACTTCGCCAAGGCAAGGTGC
TCAAGAAATACCGCATCGCCATGGGGGATAATCCTGTGGGTCACAAGCTGACCGAGGGCGATCAACGCACCCCTGAAGGC
CGTTATATACTGGATTATAAGAAGTCGGATAGTGCTTACTACCGCGCTATCCATATCTCCTACCCAAATGATGAAGACAA
ATTACGTGCTGACGCGCTCGGTATTAGCCCTGGCGGACAGATCATGATCCACGGTGAAAACCCAAATTCCAGCCTAACTC
CAGAAGAAGCCCAGATGTATAATTGGACCGATGGCTGTATCGCGATCACCAATGCCGAAATGGACGAGCTTTGGCGAGCG
ATTGAGCCCGGCACCCCAATTGAGATCTGGCCTTAA

Upstream 100 bases:

>100_bases
CAAAAATAATCTTAGCCTTTACCATCAACACCAGTGCGATTTTAAGGTAATATGAAGCCATTCACTCATCGTTTTTTAGC
CGTTTCGCTCAAGGTTTTTC

Downstream 100 bases:

>100_bases
AGAGCCAGTCACTGTTCCCATTAACAGCTATTTTTCCACTTTTTATTCCATGCCCATTTTCGTTAAGGCACACCCTATGA
CTTACCAAGAATTAATTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MRFIVLSLSLLMLISSTLFSSATFASAMASGKADLVVVTKSEASMAILRQGKVLKKYRIAMGDNPVGHKLTEGDQRTPEG
RYILDYKKSDSAYYRAIHISYPNDEDKLRADALGISPGGQIMIHGENPNSSLTPEEAQMYNWTDGCIAITNAEMDELWRA
IEPGTPIEIWP

Sequences:

>Translated_171_residues
MRFIVLSLSLLMLISSTLFSSATFASAMASGKADLVVVTKSEASMAILRQGKVLKKYRIAMGDNPVGHKLTEGDQRTPEG
RYILDYKKSDSAYYRAIHISYPNDEDKLRADALGISPGGQIMIHGENPNSSLTPEEAQMYNWTDGCIAITNAEMDELWRA
IEPGTPIEIWP
>Mature_171_residues
MRFIVLSLSLLMLISSTLFSSATFASAMASGKADLVVVTKSEASMAILRQGKVLKKYRIAMGDNPVGHKLTEGDQRTPEG
RYILDYKKSDSAYYRAIHISYPNDEDKLRADALGISPGGQIMIHGENPNSSLTPEEAQMYNWTDGCIAITNAEMDELWRA
IEPGTPIEIWP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18885; Mature: 18885

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFIVLSLSLLMLISSTLFSSATFASAMASGKADLVVVTKSEASMAILRQGKVLKKYRIA
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCHHEEEEEE
MGDNPVGHKLTEGDQRTPEGRYILDYKKSDSAYYRAIHISYPNDEDKLRADALGISPGGQ
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHEEEEEEECCCCCE
IMIHGENPNSSLTPEEAQMYNWTDGCIAITNAEMDELWRAIEPGTPIEIWP
EEEECCCCCCCCCCCHHEEEECCCCEEEEECCCHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MRFIVLSLSLLMLISSTLFSSATFASAMASGKADLVVVTKSEASMAILRQGKVLKKYRIA
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCHHEEEEEE
MGDNPVGHKLTEGDQRTPEGRYILDYKKSDSAYYRAIHISYPNDEDKLRADALGISPGGQ
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHEEEEEEECCCCCE
IMIHGENPNSSLTPEEAQMYNWTDGCIAITNAEMDELWRAIEPGTPIEIWP
EEEECCCCCCCCCCCHHEEEECCCCEEEEECCCHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA