Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yecM [H]

Identifier: 157961381

GI number: 157961381

Start: 1890346

End: 1890933

Strand: Reverse

Name: yecM [H]

Synonym: Spea_1555

Alternate gene names: 157961381

Gene position: 1890933-1890346 (Counterclockwise)

Preceding gene: 157961382

Following gene: 157961374

Centisome position: 36.54

GC content: 46.26

Gene sequence:

>588_bases
ATGCCCATTTTCGTTAAGGCACACCCTATGACTTACCAAGAATTAATTAGCAGCTGGCCGACATTTAGCCAGCGCATACA
AGCATTTACTCAAGAGTTAGGCCTAGACTCACTCAAACTTGAATGTGACCATAGCGCACTTCGCGTTAATAGCGCTGAGG
CCGCAGATGAACTGCGCCATGAGTTTGCCAAGGTCGGTAACATCATTTCAGACAATATGATAAACGGCCGCCCAATTCTA
ATCATTGAGCTAAATACACCTTTAATTATGGGTGATAGTGCGATTGAATGTGTCGAGCTGCCCTACCCAAGTGACAAAGT
CTATCCTGTCGAAGGTTGGGAGCATATTGAGTTGGTGCTCGACTGCGGCGCTAAAGATTGCGACACACTGAGCCAAGCGT
TATTGGCTCATGCACCGCAACTTGCCGCTGTTTTATCGGGGGAAACCGAGATTAAGGTGAAAATGAGTTCACCTAAAGGT
GATAAAGAGCGATTAGCGAATCCGACTATCGCCTTTAAGAGAGATGGCATTTGCGTCAAAGTTCACTCTCAGGGCATTAA
AGCGGTTATCGCTTCTGAAGCGGAATAA

Upstream 100 bases:

>100_bases
GAGCTTTGGCGAGCGATTGAGCCCGGCACCCCAATTGAGATCTGGCCTTAAAGAGCCAGTCACTGTTCCCATTAACAGCT
ATTTTTCCACTTTTTATTCC

Downstream 100 bases:

>100_bases
GACGTTGTAGATTTTAGGTTCTAGGCTGAATAAGACGTTATAGATTTTAGGCTCTAGACTCGAGTGCTAACAGCTTTTAG
GTCCTAGGTCCTAGGTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPIFVKAHPMTYQELISSWPTFSQRIQAFTQELGLDSLKLECDHSALRVNSAEAADELRHEFAKVGNIISDNMINGRPIL
IIELNTPLIMGDSAIECVELPYPSDKVYPVEGWEHIELVLDCGAKDCDTLSQALLAHAPQLAAVLSGETEIKVKMSSPKG
DKERLANPTIAFKRDGICVKVHSQGIKAVIASEAE

Sequences:

>Translated_195_residues
MPIFVKAHPMTYQELISSWPTFSQRIQAFTQELGLDSLKLECDHSALRVNSAEAADELRHEFAKVGNIISDNMINGRPIL
IIELNTPLIMGDSAIECVELPYPSDKVYPVEGWEHIELVLDCGAKDCDTLSQALLAHAPQLAAVLSGETEIKVKMSSPKG
DKERLANPTIAFKRDGICVKVHSQGIKAVIASEAE
>Mature_194_residues
PIFVKAHPMTYQELISSWPTFSQRIQAFTQELGLDSLKLECDHSALRVNSAEAADELRHEFAKVGNIISDNMINGRPILI
IELNTPLIMGDSAIECVELPYPSDKVYPVEGWEHIELVLDCGAKDCDTLSQALLAHAPQLAAVLSGETEIKVKMSSPKGD
KERLANPTIAFKRDGICVKVHSQGIKAVIASEAE

Specific function: Unknown

COG id: COG3102

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1582/HI_1581 [H]

Homologues:

Organism=Escherichia coli, GI87081996, Length=181, Percent_Identity=39.7790055248619, Blast_Score=130, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010393 [H]

Pfam domain/function: PF06185 YecM [H]

EC number: NA

Molecular weight: Translated: 21395; Mature: 21264

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIFVKAHPMTYQELISSWPTFSQRIQAFTQELGLDSLKLECDHSALRVNSAEAADELRH
CCEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCHHHHHHHHH
EFAKVGNIISDNMINGRPILIIELNTPLIMGDSAIECVELPYPSDKVYPVEGWEHIELVL
HHHHHCCHHHCCCCCCCCEEEEEECCCEEECCCCEEEEECCCCCCCEEECCCCCEEEEEE
DCGAKDCDTLSQALLAHAPQLAAVLSGETEIKVKMSSPKGDKERLANPTIAFKRDGICVK
ECCCCCHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCHHHHHCCCCEEEECCCEEEE
VHSQGIKAVIASEAE
EECCCCEEEEECCCC
>Mature Secondary Structure 
PIFVKAHPMTYQELISSWPTFSQRIQAFTQELGLDSLKLECDHSALRVNSAEAADELRH
CEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEECCHHHHHHHHH
EFAKVGNIISDNMINGRPILIIELNTPLIMGDSAIECVELPYPSDKVYPVEGWEHIELVL
HHHHHCCHHHCCCCCCCCEEEEEECCCEEECCCCEEEEECCCCCCCEEECCCCCEEEEEE
DCGAKDCDTLSQALLAHAPQLAAVLSGETEIKVKMSSPKGDKERLANPTIAFKRDGICVK
ECCCCCHHHHHHHHHHCCCHHHHHHCCCCEEEEEECCCCCHHHHHCCCCEEEECCCEEEE
VHSQGIKAVIASEAE
EECCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]