| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961342
Identifier: 157961342
GI number: 157961342
Start: 1841922
End: 1842734
Strand: Reverse
Name: 157961342
Synonym: Spea_1516
Alternate gene names: NA
Gene position: 1842734-1841922 (Counterclockwise)
Preceding gene: 157961348
Following gene: 157961336
Centisome position: 35.61
GC content: 43.67
Gene sequence:
>813_bases ATGAATAAGCATCAGCTAAAGAAAGTGCATTATGGCAACGATAGTCAACAGTTTGCCCACCTTTATACACCGAGTCATAA AGAGAAACTAACAGCTGTTGTTATCGTGATTCATGGTGGTTATTGGAAGGATAATCATACTCTTGAAACATATGCTACCA GTGCCATTGTTGATTACTTGCAAGGCTTTAATGTCGCAATATGGAACTTAGAATATCGTAGAATGGATAGTGTAGGCGAC AATATCAAAGCGCCATGGCCCGCAACATTTAAGGATATTGCAGCAGGCATAGACATGCTTCAACATATTAGCCTTGAGGA GGGTTTGGACTTAAGCCGGATCCTATTAATCGGGCATTCTGCCGGCGGACATTTGGCAACTTGGGCGGCTTCTAGAGCGA AGATATCTCCAAGCAGTCCCCTCTTCAGCCCACAAGCACTTGCTATTCGAAACGTTATTTCTATTAGCGGCATACTAGAT TTAACCGCTGCCGATGATCTTGAACAGCCTCAGCAAATACATAGGCTAATGGGAGGAACGCCAAAAGATTTTCCTGAGCG TTACCAAGCATGCAACCCAAGCGACTTACCCGCAATGCACCTTAACCTAACATTAGTGCATGGTGAGCTCGACACTTGTG TCAAAATTGCTCAGCTCAAGCGCTATAAAGAGCAAACAAGCCAAGATATAAAGCAAATTAGCATACCAAATGCAGATCAT TTCTCGATGTTACCCCATGAGGGGAACTGGCAAGAGTCTCACTGGGTGGTTATCAAACAGCTTATAGCAGATGAAATCGA CGCCTTAGCTTAA
Upstream 100 bases:
>100_bases GATAGCAAAAGTAAACTTTGGGCTTACTTTCATTAAACATTGATCCTTTGGTACACCTATTATACCGTTGAGCAATTATC AACCACACCAATACAAGACT
Downstream 100 bases:
>100_bases CGGCTCGAAATCTAGACTGTTAGCCATACTTATAGCTAACAGTCTAAGTTTCTATTTCATAGCCATGGATAGCACTGTAA AACAGCCAGCCTACTGCCGC
Product: putative hydrolase
Products: NA
Alternate protein names: Esterase/Lipase-Like Protein; Esterase; Hydrolase; Esterase/Lipase; Esterase/Lipase/Thioesterase; Dienelactone Hydrolase
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNKHQLKKVHYGNDSQQFAHLYTPSHKEKLTAVVIVIHGGYWKDNHTLETYATSAIVDYLQGFNVAIWNLEYRRMDSVGD NIKAPWPATFKDIAAGIDMLQHISLEEGLDLSRILLIGHSAGGHLATWAASRAKISPSSPLFSPQALAIRNVISISGILD LTAADDLEQPQQIHRLMGGTPKDFPERYQACNPSDLPAMHLNLTLVHGELDTCVKIAQLKRYKEQTSQDIKQISIPNADH FSMLPHEGNWQESHWVVIKQLIADEIDALA
Sequences:
>Translated_270_residues MNKHQLKKVHYGNDSQQFAHLYTPSHKEKLTAVVIVIHGGYWKDNHTLETYATSAIVDYLQGFNVAIWNLEYRRMDSVGD NIKAPWPATFKDIAAGIDMLQHISLEEGLDLSRILLIGHSAGGHLATWAASRAKISPSSPLFSPQALAIRNVISISGILD LTAADDLEQPQQIHRLMGGTPKDFPERYQACNPSDLPAMHLNLTLVHGELDTCVKIAQLKRYKEQTSQDIKQISIPNADH FSMLPHEGNWQESHWVVIKQLIADEIDALA >Mature_270_residues MNKHQLKKVHYGNDSQQFAHLYTPSHKEKLTAVVIVIHGGYWKDNHTLETYATSAIVDYLQGFNVAIWNLEYRRMDSVGD NIKAPWPATFKDIAAGIDMLQHISLEEGLDLSRILLIGHSAGGHLATWAASRAKISPSSPLFSPQALAIRNVISISGILD LTAADDLEQPQQIHRLMGGTPKDFPERYQACNPSDLPAMHLNLTLVHGELDTCVKIAQLKRYKEQTSQDIKQISIPNADH FSMLPHEGNWQESHWVVIKQLIADEIDALA
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30197; Mature: 30197
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHQLKKVHYGNDSQQFAHLYTPSHKEKLTAVVIVIHGGYWKDNHTLETYATSAIVDYL CCHHHCCCEECCCCHHHEEEECCCCCCCCEEEEEEEEECCEECCCCCHHHHHHHHHHHHH QGFNVAIWNLEYRRMDSVGDNIKAPWPATFKDIAAGIDMLQHISLEEGLDLSRILLIGHS CCCCEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEEEECC AGGHLATWAASRAKISPSSPLFSPQALAIRNVISISGILDLTAADDLEQPQQIHRLMGGT CCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCC PKDFPERYQACNPSDLPAMHLNLTLVHGELDTCVKIAQLKRYKEQTSQDIKQISIPNADH CCCHHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FSMLPHEGNWQESHWVVIKQLIADEIDALA CEECCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKHQLKKVHYGNDSQQFAHLYTPSHKEKLTAVVIVIHGGYWKDNHTLETYATSAIVDYL CCHHHCCCEECCCCHHHEEEECCCCCCCCEEEEEEEEECCEECCCCCHHHHHHHHHHHHH QGFNVAIWNLEYRRMDSVGDNIKAPWPATFKDIAAGIDMLQHISLEEGLDLSRILLIGHS CCCCEEEEEEHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEEEECC AGGHLATWAASRAKISPSSPLFSPQALAIRNVISISGILDLTAADDLEQPQQIHRLMGGT CCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCC PKDFPERYQACNPSDLPAMHLNLTLVHGELDTCVKIAQLKRYKEQTSQDIKQISIPNADH CCCHHHHHHCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FSMLPHEGNWQESHWVVIKQLIADEIDALA CEECCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA