| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is nanM [H]
Identifier: 157961340
GI number: 157961340
Start: 1837304
End: 1838458
Strand: Direct
Name: nanM [H]
Synonym: Spea_1514
Alternate gene names: 157961340
Gene position: 1837304-1838458 (Clockwise)
Preceding gene: 157961339
Following gene: 157961341
Centisome position: 35.51
GC content: 43.98
Gene sequence:
>1155_bases ATGCCGCTTGTCGCGCTTGTTTGTGGGCCAGCGTTAGCTGTGGAAAGTCAAACAAAAGTACCTGTTCAGGCCAAGGTGAG TTGGGTAAAAGCAGGGCAACTACCAGCTCCTAAAGGCTTTAATCAATCTATCGGTATAGCTGGTGCCTATAGCGCATTTG TCGGTGATTACCTTGTGGTTGCTGGCGGGGCTAATTTTCCTAAGGGCCACCCTTTTTTTGATAAGGGGGTTAAGCAGTAT TATTCAGATATTTTTGTTTTTGATACCGCAAATAATCAATTTGAGCTAGTAGCTCATGGTCACTTACCCTCCGCAAGAGG GCATGGTGCAACTGTCGTTGTTGGCAATAGTCTGTATCTTGTTGGAGGTAAAAATAACGACCAAGCCTTCGACTCTATTC TAAAGCTGACACTAGATGATAACTCTCAACCTGTGGTGAATGCTGTTAATCAACTGCCTTTTACTTGGGATTCTGGCGCG GCGGCCTGGCAAGACGACTCACTGTTTTTATTTGCTGGTAAGCATAACGGCGTAGTGAGTAATGCTGTGTGTCAGTTTTC TTTGAAACAGCAAAAATGCATCAATAAAGATAAGATAGCGCCAATCCCGGGGCTTGCGAGAGCCGATTTCCCTTCCATAA AGCATCACAAACAATTTTATGTATTTGGTGGTGCCAATGTGTTGGCAGGAAAAGGACGTTATGTTCTAACCGACGCTTAT GCGTTTGACTTTGAAGCACTAAGCTGGAGAACACTTACGCCGATTACGGTTAAAGACCAACCCTATTCTGTCGCTGGTGG AGGGGTTGCGGTGATTAACGATGAGCAGTTCATTTTGCTTGGTGGTGTAAACAGGCAAGTGTTTAACGATGCTATTTTTC AATTGACCACGAGTGCACAGGATAGGCTATCTAAGTTCAAACAATATTATTTTAGTTTGAATGAGCAAGAGGTTAACTTT AGCCGCCAACAGCTTATTTATGATCTCAATAAAGATAACTGGTCAACTTTAAGTAAGGAAGTGCCTTTTACGGGGGGAGC GGGCCCCCTTGCGATATCGCAAAAAGAGAACCAAATATATTGGATTTCTGGCGAGATAAGGCCGGTGATCCGTACCCCTA ATGTCTATCAAGCCACAATCGAACCTGTTCAATAA
Upstream 100 bases:
>100_bases CGGTGTAATGTCCTAAAACCTAATCAATGTTGATTAGGTTTTATTTTACTTAAAAGTTAAGGAGTTCCGCTTGAAGCCTA CTCAGTTATTTTTCCTACTT
Downstream 100 bases:
>100_bases CACTGGCGTCTATTTCACTATCTTGTTTAGTACATTGATATTTTTTAGCAGAGTCTGGATCTGAGACTCGCTTATCCCCT CAACTTGCTAAACCAATAAT
Product: kelch repeat-containing protein
Products: NA
Alternate protein names: N-acetylneuraminate mutarotase; Neu5Ac mutarotase; Sialic acid epimerase [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MPLVALVCGPALAVESQTKVPVQAKVSWVKAGQLPAPKGFNQSIGIAGAYSAFVGDYLVVAGGANFPKGHPFFDKGVKQY YSDIFVFDTANNQFELVAHGHLPSARGHGATVVVGNSLYLVGGKNNDQAFDSILKLTLDDNSQPVVNAVNQLPFTWDSGA AAWQDDSLFLFAGKHNGVVSNAVCQFSLKQQKCINKDKIAPIPGLARADFPSIKHHKQFYVFGGANVLAGKGRYVLTDAY AFDFEALSWRTLTPITVKDQPYSVAGGGVAVINDEQFILLGGVNRQVFNDAIFQLTTSAQDRLSKFKQYYFSLNEQEVNF SRQQLIYDLNKDNWSTLSKEVPFTGGAGPLAISQKENQIYWISGEIRPVIRTPNVYQATIEPVQ
Sequences:
>Translated_384_residues MPLVALVCGPALAVESQTKVPVQAKVSWVKAGQLPAPKGFNQSIGIAGAYSAFVGDYLVVAGGANFPKGHPFFDKGVKQY YSDIFVFDTANNQFELVAHGHLPSARGHGATVVVGNSLYLVGGKNNDQAFDSILKLTLDDNSQPVVNAVNQLPFTWDSGA AAWQDDSLFLFAGKHNGVVSNAVCQFSLKQQKCINKDKIAPIPGLARADFPSIKHHKQFYVFGGANVLAGKGRYVLTDAY AFDFEALSWRTLTPITVKDQPYSVAGGGVAVINDEQFILLGGVNRQVFNDAIFQLTTSAQDRLSKFKQYYFSLNEQEVNF SRQQLIYDLNKDNWSTLSKEVPFTGGAGPLAISQKENQIYWISGEIRPVIRTPNVYQATIEPVQ >Mature_383_residues PLVALVCGPALAVESQTKVPVQAKVSWVKAGQLPAPKGFNQSIGIAGAYSAFVGDYLVVAGGANFPKGHPFFDKGVKQYY SDIFVFDTANNQFELVAHGHLPSARGHGATVVVGNSLYLVGGKNNDQAFDSILKLTLDDNSQPVVNAVNQLPFTWDSGAA AWQDDSLFLFAGKHNGVVSNAVCQFSLKQQKCINKDKIAPIPGLARADFPSIKHHKQFYVFGGANVLAGKGRYVLTDAYA FDFEALSWRTLTPITVKDQPYSVAGGGVAVINDEQFILLGGVNRQVFNDAIFQLTTSAQDRLSKFKQYYFSLNEQEVNFS RQQLIYDLNKDNWSTLSKEVPFTGGAGPLAISQKENQIYWISGEIRPVIRTPNVYQATIEPVQ
Specific function: Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, whic
COG id: COG3055
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 7 Kelch repeats [H]
Homologues:
Organism=Escherichia coli, GI87082419, Length=233, Percent_Identity=26.1802575107296, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013089 - InterPro: IPR015915 - InterPro: IPR006652 - InterPro: IPR019936 [H]
Pfam domain/function: PF01344 Kelch_1 [H]
EC number: NA
Molecular weight: Translated: 41920; Mature: 41789
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVALVCGPALAVESQTKVPVQAKVSWVKAGQLPAPKGFNQSIGIAGAYSAFVGDYLVV CCEEEEEECCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCEEEE AGGANFPKGHPFFDKGVKQYYSDIFVFDTANNQFELVAHGHLPSARGHGATVVVGNSLYL ECCCCCCCCCCCHHHHHHHHHCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCEEEE VGGKNNDQAFDSILKLTLDDNSQPVVNAVNQLPFTWDSGAAAWQDDSLFLFAGKHNGVVS EECCCCHHHHHHEEEEEECCCCCHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCEEE NAVCQFSLKQQKCINKDKIAPIPGLARADFPSIKHHKQFYVFGGANVLAGKGRYVLTDAY CCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEEEEE AFDFEALSWRTLTPITVKDQPYSVAGGGVAVINDEQFILLGGVNRQVFNDAIFQLTTSAQ EECCCCCCEEEECEEEECCCCEEECCCCEEEEECCCEEEEECCCHHHHHHHHHEEECCHH DRLSKFKQYYFSLNEQEVNFSRQQLIYDLNKDNWSTLSKEVPFTGGAGPLAISQKENQIY HHHHHHHHHHHCCCCHHCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEEECCCCEEE WISGEIRPVIRTPNVYQATIEPVQ EEECCEEEEEECCCEEEEEECCCC >Mature Secondary Structure PLVALVCGPALAVESQTKVPVQAKVSWVKAGQLPAPKGFNQSIGIAGAYSAFVGDYLVV CEEEEEECCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCEEEE AGGANFPKGHPFFDKGVKQYYSDIFVFDTANNQFELVAHGHLPSARGHGATVVVGNSLYL ECCCCCCCCCCCHHHHHHHHHCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCEEEE VGGKNNDQAFDSILKLTLDDNSQPVVNAVNQLPFTWDSGAAAWQDDSLFLFAGKHNGVVS EECCCCHHHHHHEEEEEECCCCCHHHHHHHCCCEEECCCCCCCCCCCEEEEECCCCCEEE NAVCQFSLKQQKCINKDKIAPIPGLARADFPSIKHHKQFYVFGGANVLAGKGRYVLTDAY CCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCEEEEEEE AFDFEALSWRTLTPITVKDQPYSVAGGGVAVINDEQFILLGGVNRQVFNDAIFQLTTSAQ EECCCCCCEEEECEEEECCCCEEECCCCEEEEECCCEEEEECCCHHHHHHHHHEEECCHH DRLSKFKQYYFSLNEQEVNFSRQQLIYDLNKDNWSTLSKEVPFTGGAGPLAISQKENQIY HHHHHHHHHHHCCCCHHCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCEEEECCCCEEE WISGEIRPVIRTPNVYQATIEPVQ EEECCEEEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA