| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yecH [H]
Identifier: 157961307
GI number: 157961307
Start: 1804760
End: 1805002
Strand: Direct
Name: yecH [H]
Synonym: Spea_1481
Alternate gene names: 157961307
Gene position: 1804760-1805002 (Clockwise)
Preceding gene: 157961303
Following gene: 157961311
Centisome position: 34.88
GC content: 43.62
Gene sequence:
>243_bases ATGTCAGATTCGATTCATGGTCATCAGGTAATGGAACTTATGCTTGCGCACGGGCAATCTCTAACTAAAGAGGCGCTCAA ATCGCTTATGCATAAAGAATTTGGTGAGCAGGCGCGTTTTCACACTTGTTCCGCAAAAGAGATGGATGCCGATGAGTTGA TTGCTTTTCTAGAGAAGAAAGGTAAGTTTATTCACTCCGAAGACGGTATCGAAACGGCTGCAGATAGAATTTGCAGTCAC TAG
Upstream 100 bases:
>100_bases AATTATGGATAATGACGCGACTGCTAAGCAGATCAAAGTTTTGAGCCTATGGATAGCGTATAAAGTTGCTTAAAATATAC AGCTTATTAATAGAGGCAAT
Downstream 100 bases:
>100_bases TTATACTGATTGGAATTATTGAATACAGTAAAAATAAAGCCTGCATCTGCAGGCTTTATTTTTTATCATATTTATATGAG CTGAAGCGCAACATGGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MSDSIHGHQVMELMLAHGQSLTKEALKSLMHKEFGEQARFHTCSAKEMDADELIAFLEKKGKFIHSEDGIETAADRICSH
Sequences:
>Translated_80_residues MSDSIHGHQVMELMLAHGQSLTKEALKSLMHKEFGEQARFHTCSAKEMDADELIAFLEKKGKFIHSEDGIETAADRICSH >Mature_79_residues SDSIHGHQVMELMLAHGQSLTKEALKSLMHKEFGEQARFHTCSAKEMDADELIAFLEKKGKFIHSEDGIETAADRICSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788217, Length=78, Percent_Identity=53.8461538461538, Blast_Score=91, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019620 [H]
Pfam domain/function: PF10678 DUF2492 [H]
EC number: NA
Molecular weight: Translated: 8984; Mature: 8853
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSIHGHQVMELMLAHGQSLTKEALKSLMHKEFGEQARFHTCSAKEMDADELIAFLEKK CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH GKFIHSEDGIETAADRICSH CCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure SDSIHGHQVMELMLAHGQSLTKEALKSLMHKEFGEQARFHTCSAKEMDADELIAFLEKK CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH GKFIHSEDGIETAADRICSH CCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]