| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is eryC1 [H]
Identifier: 157961230
GI number: 157961230
Start: 1703001
End: 1704116
Strand: Direct
Name: eryC1 [H]
Synonym: Spea_1403
Alternate gene names: 157961230
Gene position: 1703001-1704116 (Clockwise)
Preceding gene: 157961229
Following gene: 157961231
Centisome position: 32.91
GC content: 35.84
Gene sequence:
>1116_bases ATGATTGATTTTTTAAACCTTAAAGACATTAATGCTCGATATGCAAAAGATTTAAAAGAAGCTTGCTCTAGGGTTATTGA CTCTGGCTGGTACGTGTTAGGTAATGAAGTAAGTGAATTTGAAAAAGAGTTCTCTAATTATTGTCAGACAAAGTATTGTT TGGGAGTTGCCAATGGACTGGATGCCTTAATATTAATTATTCGAGCTTACATTGAGTTAGGCGTTTTCAAAAAAGGCGAC GAAATTATTGTGCCTTCAAATACCTATATAGCATCCATTTTAGCCATTTCAGAAAATGGCTTGACTCCTGTTTTAGTCGA GCCAGACATAGATACTTTTAATTTAGACCCCAAAGGTATTGAGGTTGCTATAACCCCTAAAACCAAAGCCATTTTAACGG TACATTTGTATGGACAAGTTACTGGGATGGACGAAATCAATTCAATTGCTAAAAAGTATGACTTGAAGGTTATTGAAGAT TGTGCACAGGCTCACGGCGCTTTGTATACTAATAAAAAAAGCGAAGTCAAGAAAGTCGGTTGCTTAGGTGACGCCGCAGG ATTCAGCTTTTATCCAGGTAAAAATTTAGGAGCATTGGGAGATGCCGGAGCAATAACTACGAGTGATACTGAACTTGCAA ATACTATCGCTGCTCTGCGAAACTACGGTTCTCATGAAAAGTACATGAACCTTTATAAAGGGGTTAACAGTAGATTGGAT GAAATTCAAGCCGCTATGTTACGCGTTAAGTTGCGTTATTTGGACAGAGAAATCGTTGCTAGAAAGGCTGTTGCTGATGC GTACTTAAAGGGAATATATAATCCGCTTATTAAATTGCCTATGGTAGAACAGCCTGATTCTCACGTTTGGCATTTGTTCG TTATTACAACTAACGAACGCGAAAAATTATCTAAATACCTGACTGATAATAAAATACAGTCGTTAATTCATTATCCGATA CCTCCACATAAGCAAGAAGCATATAAAGAGCTTAATAATTATAACTTTCCAATTTCAGAAAAGATTCATGAGCAGGTAAT TAGTATTCCTATTAGTTCAGCAATAACAAATGAACAAATTAATAGGGTTATAGAAACTCTTAATAATTTCAAGTGA
Upstream 100 bases:
>100_bases GCCCTAGTAGTGAAGAAGGAGTTATCAATGCAGGACTTAATGAATATAAACAAATGATAGGCTGTATCAATACTTTGAAA GAAACATGGGTATACAATAA
Downstream 100 bases:
>100_bases TTAGAGGCGAGTATGCAATTGTTTTTATTGGGTGCTGGGCGTCCTGCAAATGGCAATAAACCATCAGCTTTAAAGTCCAT AGCAAGAAATACTAAAGCTA
Product: DegT/DnrJ/EryC1/StrS aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MIDFLNLKDINARYAKDLKEACSRVIDSGWYVLGNEVSEFEKEFSNYCQTKYCLGVANGLDALILIIRAYIELGVFKKGD EIIVPSNTYIASILAISENGLTPVLVEPDIDTFNLDPKGIEVAITPKTKAILTVHLYGQVTGMDEINSIAKKYDLKVIED CAQAHGALYTNKKSEVKKVGCLGDAAGFSFYPGKNLGALGDAGAITTSDTELANTIAALRNYGSHEKYMNLYKGVNSRLD EIQAAMLRVKLRYLDREIVARKAVADAYLKGIYNPLIKLPMVEQPDSHVWHLFVITTNEREKLSKYLTDNKIQSLIHYPI PPHKQEAYKELNNYNFPISEKIHEQVISIPISSAITNEQINRVIETLNNFK
Sequences:
>Translated_371_residues MIDFLNLKDINARYAKDLKEACSRVIDSGWYVLGNEVSEFEKEFSNYCQTKYCLGVANGLDALILIIRAYIELGVFKKGD EIIVPSNTYIASILAISENGLTPVLVEPDIDTFNLDPKGIEVAITPKTKAILTVHLYGQVTGMDEINSIAKKYDLKVIED CAQAHGALYTNKKSEVKKVGCLGDAAGFSFYPGKNLGALGDAGAITTSDTELANTIAALRNYGSHEKYMNLYKGVNSRLD EIQAAMLRVKLRYLDREIVARKAVADAYLKGIYNPLIKLPMVEQPDSHVWHLFVITTNEREKLSKYLTDNKIQSLIHYPI PPHKQEAYKELNNYNFPISEKIHEQVISIPISSAITNEQINRVIETLNNFK >Mature_371_residues MIDFLNLKDINARYAKDLKEACSRVIDSGWYVLGNEVSEFEKEFSNYCQTKYCLGVANGLDALILIIRAYIELGVFKKGD EIIVPSNTYIASILAISENGLTPVLVEPDIDTFNLDPKGIEVAITPKTKAILTVHLYGQVTGMDEINSIAKKYDLKVIED CAQAHGALYTNKKSEVKKVGCLGDAAGFSFYPGKNLGALGDAGAITTSDTELANTIAALRNYGSHEKYMNLYKGVNSRLD EIQAAMLRVKLRYLDREIVARKAVADAYLKGIYNPLIKLPMVEQPDSHVWHLFVITTNEREKLSKYLTDNKIQSLIHYPI PPHKQEAYKELNNYNFPISEKIHEQVISIPISSAITNEQINRVIETLNNFK
Specific function: Sensor protein that transfers the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of erythromycin biosynthesis genes (Potential) [H]
COG id: COG0399
COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the degT/dnrJ/eryC1 family [H]
Homologues:
Organism=Escherichia coli, GI145693159, Length=392, Percent_Identity=28.8265306122449, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI2367285, Length=313, Percent_Identity=29.7124600638978, Blast_Score=117, Evalue=9e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000653 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]
EC number: NA
Molecular weight: Translated: 41543; Mature: 41543
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDFLNLKDINARYAKDLKEACSRVIDSGWYVLGNEVSEFEKEFSNYCQTKYCLGVANGL CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCHH DALILIIRAYIELGVFKKGDEIIVPSNTYIASILAISENGLTPVLVEPDIDTFNLDPKGI HHHHHHHHHHHHHCCCCCCCEEEECCCHHEEEEEEECCCCCEEEEECCCCCEECCCCCCE EVAITPKTKAILTVHLYGQVTGMDEINSIAKKYDLKVIEDCAQAHGALYTNKKSEVKKVG EEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHC CLGDAAGFSFYPGKNLGALGDAGAITTSDTELANTIAALRNYGSHEKYMNLYKGVNSRLD CCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EIQAAMLRVKLRYLDREIVARKAVADAYLKGIYNPLIKLPMVEQPDSHVWHLFVITTNER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCH EKLSKYLTDNKIQSLIHYPIPPHKQEAYKELNNYNFPISEKIHEQVISIPISSAITNEQI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH NRVIETLNNFK HHHHHHHHCCC >Mature Secondary Structure MIDFLNLKDINARYAKDLKEACSRVIDSGWYVLGNEVSEFEKEFSNYCQTKYCLGVANGL CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCHH DALILIIRAYIELGVFKKGDEIIVPSNTYIASILAISENGLTPVLVEPDIDTFNLDPKGI HHHHHHHHHHHHHCCCCCCCEEEECCCHHEEEEEEECCCCCEEEEECCCCCEECCCCCCE EVAITPKTKAILTVHLYGQVTGMDEINSIAKKYDLKVIEDCAQAHGALYTNKKSEVKKVG EEEECCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHC CLGDAAGFSFYPGKNLGALGDAGAITTSDTELANTIAALRNYGSHEKYMNLYKGVNSRLD CCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EIQAAMLRVKLRYLDREIVARKAVADAYLKGIYNPLIKLPMVEQPDSHVWHLFVITTNER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCH EKLSKYLTDNKIQSLIHYPIPPHKQEAYKELNNYNFPISEKIHEQVISIPISSAITNEQI HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHH NRVIETLNNFK HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2575703 [H]