Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961229

Identifier: 157961229

GI number: 157961229

Start: 1702078

End: 1703004

Strand: Direct

Name: 157961229

Synonym: Spea_1402

Alternate gene names: NA

Gene position: 1702078-1703004 (Clockwise)

Preceding gene: 157961228

Following gene: 157961230

Centisome position: 32.89

GC content: 30.85

Gene sequence:

>927_bases
ATGATTACAAATAATGAACTTACATCATTAAAAAACATCAATGAAGGACAATCTGTTAAAAGTGAAATCCTTTATTCATC
TCGAAAGTTTAATTTCTTTAATAGAAATAAATGCGATTATGTCTATACACATTTTGACTCTAAAATGTCAATGTTCTTCG
GTGTAAAGGACAATGTGCTTATAGCTCCTTTTAGCGCGCCTTTTGCTCTTCCTCGATATGTAACAGATTTTGTTAAATAT
AGTCATGTTTACGATTTTTTTGAAGCGTTAAAAAATGATATTGAAGAATCGAATATTGAAAAGGTAAAGTTAACTATTCC
TCCTGGATTTTACAATGAAAATATTATTTCAAAAATGTCTCATAGTTTAAATTCGTTAGGTTTTGAATTGCTATATAAAG
ATTTAAACTCTCATATTTCGCTGAAAAATGAACCATTCGAAAACTTACCTTCTAAATGTAGAAACAAAATACGCGCTAGT
GAAAAGCATAATAACAGCATTGTTCATGCAGTTACATTAGAAGAAAAAGAACGTGCATATAATATAATAAAAGAAAATAG
AGTGTTAAAAGGATACCCTCTTAGATTGAGTTGGGAACAAGTTAAGGACACAATCACTAACGTAGCTAAGGCAGAGTTTT
TTATTTCAGTGACAAATGACGTTGATTCGGCTGCTGCGATGATTTTTGAAGTGAGTGATAATGTTGCTCAGGTTATATAT
TGGGGGGCAAACCAGTCCGGCGAAAAAAGTCATTCAATGTATTACTTACCATTCAAGGTAATTGAATATTACAAATCAAG
AGGATTTGATTATTTAGATATTGGCCCTAGTAGTGAAGAAGGAGTTATCAATGCAGGACTTAATGAATATAAACAAATGA
TAGGCTGTATCAATACTTTGAAAGAAACATGGGTATACAATAAATGA

Upstream 100 bases:

>100_bases
TCGTCAAATAATAAACGTGCGATAAAAGCCTATGTTAATAAAGGGTTTTATGAAGTTGAAACATTAAACGAAATTATGAA
ATTGGAATTTAAGTTATAAC

Downstream 100 bases:

>100_bases
TTGATTTTTTAAACCTTAAAGACATTAATGCTCGATATGCAAAAGATTTAAAAGAAGCTTGCTCTAGGGTTATTGACTCT
GGCTGGTACGTGTTAGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MITNNELTSLKNINEGQSVKSEILYSSRKFNFFNRNKCDYVYTHFDSKMSMFFGVKDNVLIAPFSAPFALPRYVTDFVKY
SHVYDFFEALKNDIEESNIEKVKLTIPPGFYNENIISKMSHSLNSLGFELLYKDLNSHISLKNEPFENLPSKCRNKIRAS
EKHNNSIVHAVTLEEKERAYNIIKENRVLKGYPLRLSWEQVKDTITNVAKAEFFISVTNDVDSAAAMIFEVSDNVAQVIY
WGANQSGEKSHSMYYLPFKVIEYYKSRGFDYLDIGPSSEEGVINAGLNEYKQMIGCINTLKETWVYNK

Sequences:

>Translated_308_residues
MITNNELTSLKNINEGQSVKSEILYSSRKFNFFNRNKCDYVYTHFDSKMSMFFGVKDNVLIAPFSAPFALPRYVTDFVKY
SHVYDFFEALKNDIEESNIEKVKLTIPPGFYNENIISKMSHSLNSLGFELLYKDLNSHISLKNEPFENLPSKCRNKIRAS
EKHNNSIVHAVTLEEKERAYNIIKENRVLKGYPLRLSWEQVKDTITNVAKAEFFISVTNDVDSAAAMIFEVSDNVAQVIY
WGANQSGEKSHSMYYLPFKVIEYYKSRGFDYLDIGPSSEEGVINAGLNEYKQMIGCINTLKETWVYNK
>Mature_308_residues
MITNNELTSLKNINEGQSVKSEILYSSRKFNFFNRNKCDYVYTHFDSKMSMFFGVKDNVLIAPFSAPFALPRYVTDFVKY
SHVYDFFEALKNDIEESNIEKVKLTIPPGFYNENIISKMSHSLNSLGFELLYKDLNSHISLKNEPFENLPSKCRNKIRAS
EKHNNSIVHAVTLEEKERAYNIIKENRVLKGYPLRLSWEQVKDTITNVAKAEFFISVTNDVDSAAAMIFEVSDNVAQVIY
WGANQSGEKSHSMYYLPFKVIEYYKSRGFDYLDIGPSSEEGVINAGLNEYKQMIGCINTLKETWVYNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35572; Mature: 35572

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITNNELTSLKNINEGQSVKSEILYSSRKFNFFNRNKCDYVYTHFDSKMSMFFGVKDNVL
CCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCEE
IAPFSAPFALPRYVTDFVKYSHVYDFFEALKNDIEESNIEKVKLTIPPGFYNENIISKMS
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH
HSLNSLGFELLYKDLNSHISLKNEPFENLPSKCRNKIRASEKHNNSIVHAVTLEEKERAY
HHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHH
NIIKENRVLKGYPLRLSWEQVKDTITNVAKAEFFISVTNDVDSAAAMIFEVSDNVAQVIY
HHHHHCCEECCCCCEEEHHHHHHHHHHHHHHEEEEEECCCCCCHHHEEEEECCCEEEEEE
WGANQSGEKSHSMYYLPFKVIEYYKSRGFDYLDIGPSSEEGVINAGLNEYKQMIGCINTL
ECCCCCCCCCCCEEECHHHHHHHHHHCCCCEEECCCCCCCCEEECCHHHHHHHHHHHHHH
KETWVYNK
HHHHCCCC
>Mature Secondary Structure
MITNNELTSLKNINEGQSVKSEILYSSRKFNFFNRNKCDYVYTHFDSKMSMFFGVKDNVL
CCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCEE
IAPFSAPFALPRYVTDFVKYSHVYDFFEALKNDIEESNIEKVKLTIPPGFYNENIISKMS
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHH
HSLNSLGFELLYKDLNSHISLKNEPFENLPSKCRNKIRASEKHNNSIVHAVTLEEKERAY
HHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHH
NIIKENRVLKGYPLRLSWEQVKDTITNVAKAEFFISVTNDVDSAAAMIFEVSDNVAQVIY
HHHHHCCEECCCCCEEEHHHHHHHHHHHHHHEEEEEECCCCCCHHHEEEEECCCEEEEEE
WGANQSGEKSHSMYYLPFKVIEYYKSRGFDYLDIGPSSEEGVINAGLNEYKQMIGCINTL
ECCCCCCCCCCCEEECHHHHHHHHHHCCCCEEECCCCCCCCEEECCHHHHHHHHHHHHHH
KETWVYNK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA