Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961227

Identifier: 157961227

GI number: 157961227

Start: 1701235

End: 1701633

Strand: Direct

Name: 157961227

Synonym: Spea_1400

Alternate gene names: NA

Gene position: 1701235-1701633 (Clockwise)

Preceding gene: 157961226

Following gene: 157961228

Centisome position: 32.88

GC content: 33.08

Gene sequence:

>399_bases
ATGAGTTTAATAAAAACAATACAATTTAATAAGTTCGGTGATGAACGAGGGAGCTTGGTCTCACTAGAAAGTTTTGAGAA
TATTCCTTTCGATATCAAACGAGTTTATTACCTTTATGGGATGAGTAGTCATTTGCCTCGAGGTTTTCATGCACATAAAG
AACTAGTTCAGGTAGCGGTTTGTGTTAAAGGGTCTTGCTCAATTTTAATGGATGATGGCAAAAGTAAAGATTCTATAAAA
TTAGACGATCCCAGTCTAGGATTATTAATTGATGCTATGCAATGGCATGAAATGAGCGGTTTTTCTGAAGACTGCGTATT
AATGGTTTTGGCTAGTGAAAATTATAATGAAGCTGATTATATTCGAAATTATAAGGATTATTTATGTTTGATGGAATAA

Upstream 100 bases:

>100_bases
ATAATAATTGGTTGAACACTAAACAGGTTATAGCCCTTGCTGACCCTTTAAGAAAAAATAGCTATGGTCAATATCTACTG
GACTTGTGCAGGAATGAATT

Downstream 100 bases:

>100_bases
TATCTTTTGTAGAATATGATGAACTATTCTTGGATAAGTCATGGCTTTGGTTAAATGATCCAGAAATTAAAGAATTGACA
TTAACCCCTAATTTCACCAA

Product: WxcM domain-containing protein

Products: NA

Alternate protein names: WxcM Domain Protein; WxcM-Like Protein; Bifunctional Acetyl Transferase/Isomerase; Lipopolysaccharide Biosynthesis Protein; WxcM-Like; WblP Protein; FdtA-Like Protein; WxcM Domain Protein Domain Protein; Sugar Isomerase; Isomerase; DTDP-6-Deoxy-3 4-Keto-Hexulose Isomerase; Acetyl Transferase/Isomerase; Wxcm-Like DomaiN-Containing Protein; WxcM-Like Domain-Containing Protein; NDP-Hexose Isomerase; Polysaccharide Glycan Isomerase

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSLIKTIQFNKFGDERGSLVSLESFENIPFDIKRVYYLYGMSSHLPRGFHAHKELVQVAVCVKGSCSILMDDGKSKDSIK
LDDPSLGLLIDAMQWHEMSGFSEDCVLMVLASENYNEADYIRNYKDYLCLME

Sequences:

>Translated_132_residues
MSLIKTIQFNKFGDERGSLVSLESFENIPFDIKRVYYLYGMSSHLPRGFHAHKELVQVAVCVKGSCSILMDDGKSKDSIK
LDDPSLGLLIDAMQWHEMSGFSEDCVLMVLASENYNEADYIRNYKDYLCLME
>Mature_131_residues
SLIKTIQFNKFGDERGSLVSLESFENIPFDIKRVYYLYGMSSHLPRGFHAHKELVQVAVCVKGSCSILMDDGKSKDSIKL
DDPSLGLLIDAMQWHEMSGFSEDCVLMVLASENYNEADYIRNYKDYLCLME

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15089; Mature: 14958

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIKTIQFNKFGDERGSLVSLESFENIPFDIKRVYYLYGMSSHLPRGFHAHKELVQVAV
CCCCCEEECCCCCCCCCCEEEECCCCCCCHHHHHEEHEECCCCCCCCCHHHHHHHHHHHH
CVKGSCSILMDDGKSKDSIKLDDPSLGLLIDAMQWHEMSGFSEDCVLMVLASENYNEADY
CCCCCCEEEECCCCCCCCEEECCCCCCEEEEHHHHHHCCCCCCCEEEEEEECCCCCHHHH
IRNYKDYLCLME
HHCHHHEEEECC
>Mature Secondary Structure 
SLIKTIQFNKFGDERGSLVSLESFENIPFDIKRVYYLYGMSSHLPRGFHAHKELVQVAV
CCCCEEECCCCCCCCCCEEEECCCCCCCHHHHHEEHEECCCCCCCCCHHHHHHHHHHHH
CVKGSCSILMDDGKSKDSIKLDDPSLGLLIDAMQWHEMSGFSEDCVLMVLASENYNEADY
CCCCCCEEEECCCCCCCCEEECCCCCCEEEEHHHHHHCCCCCCCEEEEEEECCCCCHHHH
IRNYKDYLCLME
HHCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA