| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is hnr [H]
Identifier: 157961219
GI number: 157961219
Start: 1689078
End: 1690184
Strand: Direct
Name: hnr [H]
Synonym: Spea_1391
Alternate gene names: 157961219
Gene position: 1689078-1690184 (Clockwise)
Preceding gene: 157961218
Following gene: 157961221
Centisome position: 32.64
GC content: 42.28
Gene sequence:
>1107_bases ATGGCGTTAAAAGAGCTAACGATACTTTTTGTGGAAGACGACCCTGTCTTTCGTAAACTTGTCACATCTTATCTAGAAAG CCGCGGTGCAGACGTAACAGAAGCAGAGAATGGTGAGCAAGGGCTAATTAGTTTCAAATCACAGCAGTTTGATATTGTAA TTGCAGATTTAAGCATGCCGAAACTGGGCGGCTTAGACATGCTTGAGGCGATGAATCAACACAGTCCCAGTACACCATCA ATCATTATTTCGGGTAACCAGGCGATGTCTGATGTGATTGAAGCGTTAAGACGTGGTGCCAGTGATTACCTTGTCAAACC GGTATCCGATCTATATCTAATTGAAAACTCAATTCGTGAATGTTTGAATAGCTCGCTAGAAGAGTCCTTGAACCTTGATG ATCAAGAGTCTTTGTCCTATTTAGAACTCAATGAGAACTTAGCTCTTTTAGAGCAAAGCAGCGAAGCGGCAAAGAGTGTC CAGCAACAACTGTTTCCTCCAAGCCGTGTTGAATATAGCGATGTCGTTATCGATTACAGCCTATTTAACACCGATGAGGT AAGTGCCCACTTTATCGATACCGCCATGATAGATGAAAAACATGTGATGATGTACATGGCACATTTCCATCCCCATGATA ACCGAGCGGCGTTTGCTTCAGTTTTATTGAAGAGTTTCGTTAACCATAAGCTTAAGCTCTTCAGGAACGGCGTGTCACAG GTCGTTATCGACCCTTTTAATATGCTGGTTTATCTTAATGACCGAATGACGAAGTCTGGGCTTGGTATTGTCGTCGATAT GACCTATATCGTTGTCGATTTAACTAATTACCGGGCATCAATAGCCAAAGCTGGAAACGAATTTCGCTGTTACTTAAAAA ATAGCGAGGGGCTGTCTCCTATCGCACTAGCAGACTCTTTACAGCTAGGAATGGCAAATTGGAGCAAGCCCAGTGTTCAG TTTAGAACTTTACTCTTTGGTGAAAAGTTGTGTATTTCAACGCTAGTGAGTGAACACAAACAACTGCTTTTAGACAACCA ATTCCATGGACTAATTCATCAGCCAGAAACCGAGCCTGGTGGGTATATGCAGCTTTCTTTAAAATAA
Upstream 100 bases:
>100_bases AATAGCATTAGAATAAGTGGACAAATAATAATAACTGCTCCGCTTAAAGCGTAAACAAGACACAAGGACGTCGGTTTTCG CTGTTGTCAAAGGGCAGCTT
Downstream 100 bases:
>100_bases GGTTCTAGGAGGAGCAGGTTATAGGCTCTAGGAAGAGCTTTATAGATTGTACTCGTTTTGTTTATTCAAGGATGAATGTA TGAAAACTCTAACTTTTGAG
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MALKELTILFVEDDPVFRKLVTSYLESRGADVTEAENGEQGLISFKSQQFDIVIADLSMPKLGGLDMLEAMNQHSPSTPS IIISGNQAMSDVIEALRRGASDYLVKPVSDLYLIENSIRECLNSSLEESLNLDDQESLSYLELNENLALLEQSSEAAKSV QQQLFPPSRVEYSDVVIDYSLFNTDEVSAHFIDTAMIDEKHVMMYMAHFHPHDNRAAFASVLLKSFVNHKLKLFRNGVSQ VVIDPFNMLVYLNDRMTKSGLGIVVDMTYIVVDLTNYRASIAKAGNEFRCYLKNSEGLSPIALADSLQLGMANWSKPSVQ FRTLLFGEKLCISTLVSEHKQLLLDNQFHGLIHQPETEPGGYMQLSLK
Sequences:
>Translated_368_residues MALKELTILFVEDDPVFRKLVTSYLESRGADVTEAENGEQGLISFKSQQFDIVIADLSMPKLGGLDMLEAMNQHSPSTPS IIISGNQAMSDVIEALRRGASDYLVKPVSDLYLIENSIRECLNSSLEESLNLDDQESLSYLELNENLALLEQSSEAAKSV QQQLFPPSRVEYSDVVIDYSLFNTDEVSAHFIDTAMIDEKHVMMYMAHFHPHDNRAAFASVLLKSFVNHKLKLFRNGVSQ VVIDPFNMLVYLNDRMTKSGLGIVVDMTYIVVDLTNYRASIAKAGNEFRCYLKNSEGLSPIALADSLQLGMANWSKPSVQ FRTLLFGEKLCISTLVSEHKQLLLDNQFHGLIHQPETEPGGYMQLSLK >Mature_367_residues ALKELTILFVEDDPVFRKLVTSYLESRGADVTEAENGEQGLISFKSQQFDIVIADLSMPKLGGLDMLEAMNQHSPSTPSI IISGNQAMSDVIEALRRGASDYLVKPVSDLYLIENSIRECLNSSLEESLNLDDQESLSYLELNENLALLEQSSEAAKSVQ QQLFPPSRVEYSDVVIDYSLFNTDEVSAHFIDTAMIDEKHVMMYMAHFHPHDNRAAFASVLLKSFVNHKLKLFRNGVSQV VIDPFNMLVYLNDRMTKSGLGIVVDMTYIVVDLTNYRASIAKAGNEFRCYLKNSEGLSPIALADSLQLGMANWSKPSVQF RTLLFGEKLCISTLVSEHKQLLLDNQFHGLIHQPETEPGGYMQLSLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1787487, Length=198, Percent_Identity=31.3131313131313, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1788905, Length=161, Percent_Identity=29.1925465838509, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786911, Length=100, Percent_Identity=37, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789402, Length=114, Percent_Identity=33.3333333333333, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1788550, Length=100, Percent_Identity=33, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1790437, Length=103, Percent_Identity=32.0388349514563, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790299, Length=114, Percent_Identity=30.7017543859649, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788191, Length=127, Percent_Identity=33.0708661417323, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 41214; Mature: 41082
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKELTILFVEDDPVFRKLVTSYLESRGADVTEAENGEQGLISFKSQQFDIVIADLSMP CCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCC KLGGLDMLEAMNQHSPSTPSIIISGNQAMSDVIEALRRGASDYLVKPVSDLYLIENSIRE CCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHH CLNSSLEESLNLDDQESLSYLELNENLALLEQSSEAAKSVQQQLFPPSRVEYSDVVIDYS HHHHHHHHHCCCCCHHCCCEEEECCCEEEHHCCHHHHHHHHHHCCCCCCCCHHHEEEEEE LFNTDEVSAHFIDTAMIDEKHVMMYMAHFHPHDNRAAFASVLLKSFVNHKLKLFRNGVSQ ECCCCCCHHHHHHHHHCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH VVIDPFNMLVYLNDRMTKSGLGIVVDMTYIVVDLTNYRASIAKAGNEFRCYLKNSEGLSP EEECCCEEEEEECCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHCCCCEEEEEECCCCCCC IALADSLQLGMANWSKPSVQFRTLLFGEKLCISTLVSEHKQLLLDNQFHGLIHQPETEPG CHHHHHHHHCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC GYMQLSLK CEEEEEEC >Mature Secondary Structure ALKELTILFVEDDPVFRKLVTSYLESRGADVTEAENGEQGLISFKSQQFDIVIADLSMP CCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCC KLGGLDMLEAMNQHSPSTPSIIISGNQAMSDVIEALRRGASDYLVKPVSDLYLIENSIRE CCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHH CLNSSLEESLNLDDQESLSYLELNENLALLEQSSEAAKSVQQQLFPPSRVEYSDVVIDYS HHHHHHHHHCCCCCHHCCCEEEECCCEEEHHCCHHHHHHHHHHCCCCCCCCHHHEEEEEE LFNTDEVSAHFIDTAMIDEKHVMMYMAHFHPHDNRAAFASVLLKSFVNHKLKLFRNGVSQ ECCCCCCHHHHHHHHHCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH VVIDPFNMLVYLNDRMTKSGLGIVVDMTYIVVDLTNYRASIAKAGNEFRCYLKNSEGLSP EEECCCEEEEEECCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHCCCCEEEEEECCCCCCC IALADSLQLGMANWSKPSVQFRTLLFGEKLCISTLVSEHKQLLLDNQFHGLIHQPETEPG CHHHHHHHHCCCCCCCCCCEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCC GYMQLSLK CEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]