| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is flgK [H]
Identifier: 157961177
GI number: 157961177
Start: 1642832
End: 1644754
Strand: Direct
Name: flgK [H]
Synonym: Spea_1349
Alternate gene names: 157961177
Gene position: 1642832-1644754 (Clockwise)
Preceding gene: 157961176
Following gene: 157961178
Centisome position: 31.75
GC content: 47.79
Gene sequence:
>1923_bases ATGTCTTTAGATTTAATGAATATAGCTCGCACAGGCGTGCTGGCCTCTCAATCGCAACTGGCGATAACCAGTAATAACAT CGCTAATGCTAATACTGCAGGCTATAACCGTCAGGTGGTTTCACAGTCGGCGCTTGATTCACAGCGCATGGGCAATGACT TTTATGGTGCGGGTACCTATGTCTCTGATGTTAAACGCGTCTATAACGACTACGCCACAAGAGAGTTGCGTATTGGCTCT ACTGCTGTCAGTGAGACGCAAACAACGTTTGGCAAGATGAGTGAGTTAGATCAGCTGTTCTCACAAATCGGTAAAGGGGT ACCAGAAGGGCTAAACAATTTCTTTGCCAGCATGAACGCCTTATCTGATATCCCTGGTGATTTGGGAATGCGAGGTTCAA TGCTGACCAGCGCTAACCAATTAGCCGACAGCATTAATCAAATGCAAGGGCACCTTGATAGCCAGATGACTCAGACCAAT GACCAGATTGCCGCAGTAACGACTCGTATCAATGAGATCAGTAAAGAATTAGGCAATATCAACAGAGAGCTGATGAAGTC TCAGGGCGAAGACATGCAGCTCTTAGACAAACAAGATGCACTGATTTTAGAGCTGAGTGAGTATGCCTCTGTTAACGTAG TGCCACTCGATTCAGGAGCCAAGAGTGTGATGCTTGGCGGTTCTATGATGTTGGTATCGGGCGAAGTCTCGATGCAAATG GGCACAGTGCAAGGTGACCCTTACCCTAATGAGTTACAGATCACCGCACAGTCGGGCAATAAGAGCATGATTGTTGATGC AACCAAACTGGGAGGTCAGTTAGGTGCATTAGTTAACTACCGCGATGAAACTTTGACCCCATCGCAGATGGAGTTTGGTC AATACGCATTAGGTGTAGCCGATGCGTTTAATCAGGCGCAGGCACAAGGTTTTGACTTAAATGGTCAAGTCGGCGCCAAT ATCTTTACCGATATTAACGACCCATCAATGCAGATTGGCCGTGTCGGTGCACTATCGAGCAATACGGGCACTGCAAATCT AAGCGTTAATATTGACGATGTTGGCAGTTTAACTGGCAGCAGTTATGAGCTTAAGTTTACCGCTCCATCAACCTATGAGC TAAAAGATGCCGCCAGCGGCAATATTACGCCGCTGACGTTAAACGGCACTAAGCTCGAGGGCGCTGATGGCTTTAGCATC GACATCGACGCGGGGGCACTCGCCTCTGGTGACACCTTTGAGATTCGTCCAACTTCGGGGGCGGCGGCCTCAATATCGGT CGAGATGACAGACGGTAAAGGCATTGCCGCGGCGGGAACTAAAATTACTGCCGATGCGGCAAACACCGGTAATAGCCAAG TCAAGCTTGTGAGTATCGATGACAGAACGGACACCAATTTCCCGGTTACAGGTTCAGAGCTCACCTTTGAAATCGATCCT GCTGCCACGCCGCCCACATTTGAAGTGTTTGACGTTGATGGCACATCGCTTGGCGCCGCCGCAGCTTATACACCCCCGAA TATCAGCGCTCATGGTTTTACCTTCGAGATTGATTCTACCGCAGCGACTGCGGAGAAGTTTACCTTCGACTTATCATTTG CTGAAGGTGATAACACTAACATGGTGAACATGGCCAAGCTCAATGAAGCTAAATTGATGAATGGTGGCAAAACAACGTTA AATGACGTGTATGAAAACACTAAGTTTGATGTGGGCAGCAAGACTAAAGCTGCTGAGGTTGCTATGGGGTCTGCTGATGC AATATACACTCAAGCCTATACCCGAGTACAAAGTGTGTCAGGGGTTAATCTTGATGAAGAGGCGGCAAACTTGATGCGTT TTCAACAGTCTTATCAGGCGTCGGCACGGATCATGACCACAGCCAATGAAATATTCAACACACTATTTAGTTCTCTGCGT TAG
Upstream 100 bases:
>100_bases GTGATGAAAACCATTACTCGAGACTTTAAAGATGTCTTACAAGGGGTTAAGCAATGAAGATTAGTGTTGTTCAACCACTT GAAGCAGGGAGTCAGTACGC
Downstream 100 bases:
>100_bases CACTGAAGACTTCAAGGTTTGAGATAGGATTAGGGACAGAGCTTAGGGCTTAGGGCTTAGGGCTTAAGAATAGGAATTAA GATTATGCGAATTTCAACAG
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MSLDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNDFYGAGTYVSDVKRVYNDYATRELRIGS TAVSETQTTFGKMSELDQLFSQIGKGVPEGLNNFFASMNALSDIPGDLGMRGSMLTSANQLADSINQMQGHLDSQMTQTN DQIAAVTTRINEISKELGNINRELMKSQGEDMQLLDKQDALILELSEYASVNVVPLDSGAKSVMLGGSMMLVSGEVSMQM GTVQGDPYPNELQITAQSGNKSMIVDATKLGGQLGALVNYRDETLTPSQMEFGQYALGVADAFNQAQAQGFDLNGQVGAN IFTDINDPSMQIGRVGALSSNTGTANLSVNIDDVGSLTGSSYELKFTAPSTYELKDAASGNITPLTLNGTKLEGADGFSI DIDAGALASGDTFEIRPTSGAAASISVEMTDGKGIAAAGTKITADAANTGNSQVKLVSIDDRTDTNFPVTGSELTFEIDP AATPPTFEVFDVDGTSLGAAAAYTPPNISAHGFTFEIDSTAATAEKFTFDLSFAEGDNTNMVNMAKLNEAKLMNGGKTTL NDVYENTKFDVGSKTKAAEVAMGSADAIYTQAYTRVQSVSGVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR
Sequences:
>Translated_640_residues MSLDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNDFYGAGTYVSDVKRVYNDYATRELRIGS TAVSETQTTFGKMSELDQLFSQIGKGVPEGLNNFFASMNALSDIPGDLGMRGSMLTSANQLADSINQMQGHLDSQMTQTN DQIAAVTTRINEISKELGNINRELMKSQGEDMQLLDKQDALILELSEYASVNVVPLDSGAKSVMLGGSMMLVSGEVSMQM GTVQGDPYPNELQITAQSGNKSMIVDATKLGGQLGALVNYRDETLTPSQMEFGQYALGVADAFNQAQAQGFDLNGQVGAN IFTDINDPSMQIGRVGALSSNTGTANLSVNIDDVGSLTGSSYELKFTAPSTYELKDAASGNITPLTLNGTKLEGADGFSI DIDAGALASGDTFEIRPTSGAAASISVEMTDGKGIAAAGTKITADAANTGNSQVKLVSIDDRTDTNFPVTGSELTFEIDP AATPPTFEVFDVDGTSLGAAAAYTPPNISAHGFTFEIDSTAATAEKFTFDLSFAEGDNTNMVNMAKLNEAKLMNGGKTTL NDVYENTKFDVGSKTKAAEVAMGSADAIYTQAYTRVQSVSGVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR >Mature_639_residues SLDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNDFYGAGTYVSDVKRVYNDYATRELRIGST AVSETQTTFGKMSELDQLFSQIGKGVPEGLNNFFASMNALSDIPGDLGMRGSMLTSANQLADSINQMQGHLDSQMTQTND QIAAVTTRINEISKELGNINRELMKSQGEDMQLLDKQDALILELSEYASVNVVPLDSGAKSVMLGGSMMLVSGEVSMQMG TVQGDPYPNELQITAQSGNKSMIVDATKLGGQLGALVNYRDETLTPSQMEFGQYALGVADAFNQAQAQGFDLNGQVGANI FTDINDPSMQIGRVGALSSNTGTANLSVNIDDVGSLTGSSYELKFTAPSTYELKDAASGNITPLTLNGTKLEGADGFSID IDAGALASGDTFEIRPTSGAAASISVEMTDGKGIAAAGTKITADAANTGNSQVKLVSIDDRTDTNFPVTGSELTFEIDPA ATPPTFEVFDVDGTSLGAAAAYTPPNISAHGFTFEIDSTAATAEKFTFDLSFAEGDNTNMVNMAKLNEAKLMNGGKTTLN DVYENTKFDVGSKTKAAEVAMGSADAIYTQAYTRVQSVSGVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=453, Percent_Identity=26.9315673289183, Blast_Score=152, Evalue=7e-38,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 67697; Mature: 67566
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNDFYGAGTY CCCCHHHHHHHCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH VSDVKRVYNDYATRELRIGSTAVSETQTTFGKMSELDQLFSQIGKGVPEGLNNFFASMNA HHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LSDIPGDLGMRGSMLTSANQLADSINQMQGHLDSQMTQTNDQIAAVTTRINEISKELGNI HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH NRELMKSQGEDMQLLDKQDALILELSEYASVNVVPLDSGAKSVMLGGSMMLVSGEVSMQM HHHHHHCCCCCHHHHCCCCCEEEEEHHHCEEEEEECCCCCCEEEECCEEEEEECCEEEEE GTVQGDPYPNELQITAQSGNKSMIVDATKLGGQLGALVNYRDETLTPSQMEFGQYALGVA EEECCCCCCCEEEEEEECCCCEEEEEHHHCCCCHHHEEECCCCCCCCCHHHHHHHHHHHH DAFNQAQAQGFDLNGQVGANIFTDINDPSMQIGRVGALSSNTGTANLSVNIDDVGSLTGS HHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCC SYELKFTAPSTYELKDAASGNITPLTLNGTKLEGADGFSIDIDAGALASGDTFEIRPTSG CEEEEEECCCCEEECCCCCCCEEEEEECCCEECCCCCCEEEECCCCCCCCCEEEEEECCC AAASISVEMTDGKGIAAAGTKITADAANTGNSQVKLVSIDDRTDTNFPVTGSELTFEIDP CEEEEEEEEECCCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECC AATPPTFEVFDVDGTSLGAAAAYTPPNISAHGFTFEIDSTAATAEKFTFDLSFAEGDNTN CCCCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCC MVNMAKLNEAKLMNGGKTTLNDVYENTKFDVGSKTKAAEVAMGSADAIYTQAYTRVQSVS EEEEEECCHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHCC GVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR CCCCCHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHCC >Mature Secondary Structure SLDLMNIARTGVLASQSQLAITSNNIANANTAGYNRQVVSQSALDSQRMGNDFYGAGTY CCCHHHHHHHCEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH VSDVKRVYNDYATRELRIGSTAVSETQTTFGKMSELDQLFSQIGKGVPEGLNNFFASMNA HHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LSDIPGDLGMRGSMLTSANQLADSINQMQGHLDSQMTQTNDQIAAVTTRINEISKELGNI HHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH NRELMKSQGEDMQLLDKQDALILELSEYASVNVVPLDSGAKSVMLGGSMMLVSGEVSMQM HHHHHHCCCCCHHHHCCCCCEEEEEHHHCEEEEEECCCCCCEEEECCEEEEEECCEEEEE GTVQGDPYPNELQITAQSGNKSMIVDATKLGGQLGALVNYRDETLTPSQMEFGQYALGVA EEECCCCCCCEEEEEEECCCCEEEEEHHHCCCCHHHEEECCCCCCCCCHHHHHHHHHHHH DAFNQAQAQGFDLNGQVGANIFTDINDPSMQIGRVGALSSNTGTANLSVNIDDVGSLTGS HHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCC SYELKFTAPSTYELKDAASGNITPLTLNGTKLEGADGFSIDIDAGALASGDTFEIRPTSG CEEEEEECCCCEEECCCCCCCEEEEEECCCEECCCCCCEEEECCCCCCCCCEEEEEECCC AAASISVEMTDGKGIAAAGTKITADAANTGNSQVKLVSIDDRTDTNFPVTGSELTFEIDP CEEEEEEEEECCCCEEECCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECC AATPPTFEVFDVDGTSLGAAAAYTPPNISAHGFTFEIDSTAATAEKFTFDLSFAEGDNTN CCCCCCEEEEECCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCC MVNMAKLNEAKLMNGGKTTLNDVYENTKFDVGSKTKAAEVAMGSADAIYTQAYTRVQSVS EEEEEECCHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHHEECCCCCHHHHHHHHHHHHCC GVNLDEEAANLMRFQQSYQASARIMTTANEIFNTLFSSLR CCCCCHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 8158647 [H]