| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961163
Identifier: 157961163
GI number: 157961163
Start: 1630556
End: 1630981
Strand: Reverse
Name: 157961163
Synonym: Spea_1335
Alternate gene names: NA
Gene position: 1630981-1630556 (Counterclockwise)
Preceding gene: 157961164
Following gene: 157961160
Centisome position: 31.52
GC content: 42.02
Gene sequence:
>426_bases ATGACTAATTTATCTCAACTCATTAGCTCACAACACCAAGTGCTGACCGAGCTAAAAGAATTGATCAGCCAAGAGAAACA GGCTTTGCACGCACAGCAGGCCGATGTTTTATTGTCGTTAGCTAGCACTAAGGCAAATCTATTGGCGAGTCTTAAACAAA ATGATGAGATAATTGCACAGCAGCCCGATCTAGCCTTGTTAAAGACCGACCCAGAGCTATCGCAGCAAGTAGCTAATACC AAGCAATTATTAGCCGAATGCCAACAGCTCAATGCCGAAAATGAATCCTTGATTGAATTAAGTTTAGCCAGCTTAAATCG ATTCTCGCAGGCACTGCAAGTCAGCAGAAACTCCTCTAGCCTAACCTATGACGGTAAAGGCAAAACCTCAAGTATCTCCA CTCTAGGTAATAATTTAAAAGCTTAA
Upstream 100 bases:
>100_bases TTAAGCCCTGTGTTCCAGCTTTCGTTTACAACGTCGCGGTCACTGGGCTCTACAAAATAAAAAGTAACCAACACGTTTGA CTCAAAATAGACAGGCCATT
Downstream 100 bases:
>100_bases ATGTTTAAAACAAGGACGCTGCGCTGCGAGGACGTGACTTTGTCTCAATTGAATGTCACTTCGAGGGCGTCGCGTTGCGA CTTCTAGATCCTAGGTTAAA
Product: FlgN family protein
Products: NA
Alternate protein names: Flagellar Biosynthetic Protein FlgN; Chaperone FlgN; Polar Flagellar FlgN; Polar Flagellar FlgN-Like Protein; Flagellar Protein FlgN; Flagellar Biosynthesis/Type III Secretory Pathway Chaperone
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTNLSQLISSQHQVLTELKELISQEKQALHAQQADVLLSLASTKANLLASLKQNDEIIAQQPDLALLKTDPELSQQVANT KQLLAECQQLNAENESLIELSLASLNRFSQALQVSRNSSSLTYDGKGKTSSISTLGNNLKA
Sequences:
>Translated_141_residues MTNLSQLISSQHQVLTELKELISQEKQALHAQQADVLLSLASTKANLLASLKQNDEIIAQQPDLALLKTDPELSQQVANT KQLLAECQQLNAENESLIELSLASLNRFSQALQVSRNSSSLTYDGKGKTSSISTLGNNLKA >Mature_140_residues TNLSQLISSQHQVLTELKELISQEKQALHAQQADVLLSLASTKANLLASLKQNDEIIAQQPDLALLKTDPELSQQVANTK QLLAECQQLNAENESLIELSLASLNRFSQALQVSRNSSSLTYDGKGKTSSISTLGNNLKA
Specific function: Unknown
COG id: COG3418
COG function: function code NUO; Flagellar biosynthesis/type III secretory pathway chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15314; Mature: 15183
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLSQLISSQHQVLTELKELISQEKQALHAQQADVLLSLASTKANLLASLKQNDEIIAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC QPDLALLKTDPELSQQVANTKQLLAECQQLNAENESLIELSLASLNRFSQALQVSRNSSS CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LTYDGKGKTSSISTLGNNLKA EEECCCCCCHHHHHHHCCCCC >Mature Secondary Structure TNLSQLISSQHQVLTELKELISQEKQALHAQQADVLLSLASTKANLLASLKQNDEIIAQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC QPDLALLKTDPELSQQVANTKQLLAECQQLNAENESLIELSLASLNRFSQALQVSRNSSS CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LTYDGKGKTSSISTLGNNLKA EEECCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA