| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961160
Identifier: 157961160
GI number: 157961160
Start: 1627615
End: 1628784
Strand: Reverse
Name: 157961160
Synonym: Spea_1332
Alternate gene names: NA
Gene position: 1628784-1627615 (Counterclockwise)
Preceding gene: 157961163
Following gene: 157961159
Centisome position: 31.48
GC content: 46.75
Gene sequence:
>1170_bases ATGAAATCAGCGCAATATTTTACAACCGCACTCCTATGCTTAGCGTCATCTGGACTAACTTTACCTGTGCAAGCAAAATG GATCAGCGCCAGCGGTCAAGCCACAATCACAGATAACAATGTTAACCAGGCTAGAGAAAATGCTATTCATCAAGCGGTTA GCTATGCAACATTGCAATCTGGTGCACGTTTCAGCAGCCAACAGACAGTCAGAAATGGCCAACTGGTTAACGACTCTTTT ATCCTAGAGCAGCAAGCACAAAGCCAGAATGTTGAACTGGTGAGTGAGCTTATTGAAGACGGTCAAATCACGGTTAACGT ACGCATCGATATGATGGAACCGCTCAACGACACATGCCAAGCTACTCAACTCAAAGCGGCAATCCTCATCCCCCAGGCAC TGATTAAAGATAGAACCCAGCTTAGATACGGCAACATTGGCCTTTTCGAACAAAACTTATCTGAGCGACTCGCTAGCACC CTAGAGCAGAACGCCAGTAACAGCTTTCCACAGACTCACGCCAATGAACGCTTAGACATAGATCAGGCCTTAGTGGATGT GCGAGGCTATCGCTTACCCAGTTGGCTAAGTGAAATCACCGATAGTCAGTATATTTTACTCCCAGAGATCATCGATATCT CAACCGAGCCATTCACGACGACCTTGGGGCTTTGGGACAATGACCCTATGCGCAACTTCCATATTCGCGTCTCTTTGTTC CACGGCATAAGCGGCGAAAAGATTTGGAGCCAGCAATATAGCCAATCTGCAGAGTGGGAGTTTAAGCGCCAGCAAACGGT AAATTCAAACAGTGAAAACTTCTGGAGCAGTGAGTACGGACAGGCAATCGATCAAGTACTCGCCAAGGTGAGTCACGATA TCGACAGCAGTCTAAATTGTCGCCCCTTGCTGGGTCAGGTTGTCTCAAGACAAGCCAATAGAATCATCCTTAATCTGGGC AGGCGTCATGGCATTCGGGTTGGTGATACCTTGCAGTTAGTATTACAGCAAAATATGCCTGACAGGCTGGATAACATGCG CGCAGTGGTAGGTAAAAGCAAAGCAAGCATTACCATAGATCAAGTCACTGAAGAGAGCGCAACCGCGGTATTAGATGGCA TAGCCGCATCGCTAAACATCCAAATCAATGACCTAGCCATAAAGTTATAA
Upstream 100 bases:
>100_bases AGGCACATAAATTGCTTAACACTAAGCTAAGCATGTAAGTTCGTCAGTTATCCGACATATGCATTCTTCGGTTATCAATT TCTAAAACTGGAAAGGTAAG
Downstream 100 bases:
>100_bases CTAAAGTATTGAGTAAAGTTGCAGGCTCGCATGACAAGCAAGAGTTACAAGCTAAAGCTAATTCATGACGATTAGCCTGC AAAACACCAGATTGCGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKSAQYFTTALLCLASSGLTLPVQAKWISASGQATITDNNVNQARENAIHQAVSYATLQSGARFSSQQTVRNGQLVNDSF ILEQQAQSQNVELVSELIEDGQITVNVRIDMMEPLNDTCQATQLKAAILIPQALIKDRTQLRYGNIGLFEQNLSERLAST LEQNASNSFPQTHANERLDIDQALVDVRGYRLPSWLSEITDSQYILLPEIIDISTEPFTTTLGLWDNDPMRNFHIRVSLF HGISGEKIWSQQYSQSAEWEFKRQQTVNSNSENFWSSEYGQAIDQVLAKVSHDIDSSLNCRPLLGQVVSRQANRIILNLG RRHGIRVGDTLQLVLQQNMPDRLDNMRAVVGKSKASITIDQVTEESATAVLDGIAASLNIQINDLAIKL
Sequences:
>Translated_389_residues MKSAQYFTTALLCLASSGLTLPVQAKWISASGQATITDNNVNQARENAIHQAVSYATLQSGARFSSQQTVRNGQLVNDSF ILEQQAQSQNVELVSELIEDGQITVNVRIDMMEPLNDTCQATQLKAAILIPQALIKDRTQLRYGNIGLFEQNLSERLAST LEQNASNSFPQTHANERLDIDQALVDVRGYRLPSWLSEITDSQYILLPEIIDISTEPFTTTLGLWDNDPMRNFHIRVSLF HGISGEKIWSQQYSQSAEWEFKRQQTVNSNSENFWSSEYGQAIDQVLAKVSHDIDSSLNCRPLLGQVVSRQANRIILNLG RRHGIRVGDTLQLVLQQNMPDRLDNMRAVVGKSKASITIDQVTEESATAVLDGIAASLNIQINDLAIKL >Mature_389_residues MKSAQYFTTALLCLASSGLTLPVQAKWISASGQATITDNNVNQARENAIHQAVSYATLQSGARFSSQQTVRNGQLVNDSF ILEQQAQSQNVELVSELIEDGQITVNVRIDMMEPLNDTCQATQLKAAILIPQALIKDRTQLRYGNIGLFEQNLSERLAST LEQNASNSFPQTHANERLDIDQALVDVRGYRLPSWLSEITDSQYILLPEIIDISTEPFTTTLGLWDNDPMRNFHIRVSLF HGISGEKIWSQQYSQSAEWEFKRQQTVNSNSENFWSSEYGQAIDQVLAKVSHDIDSSLNCRPLLGQVVSRQANRIILNLG RRHGIRVGDTLQLVLQQNMPDRLDNMRAVVGKSKASITIDQVTEESATAVLDGIAASLNIQINDLAIKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43342; Mature: 43342
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSAQYFTTALLCLASSGLTLPVQAKWISASGQATITDNNVNQARENAIHQAVSYATLQS CCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHC GARFSSQQTVRNGQLVNDSFILEQQAQSQNVELVSELIEDGQITVNVRIDMMEPLNDTCQ CCCCCCHHHHCCCCEECCHHHHHHHHHCCCHHHHHHHHHCCEEEEEEEEEECCCCCHHHH ATQLKAAILIPQALIKDRTQLRYGNIGLFEQNLSERLASTLEQNASNSFPQTHANERLDI HHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH DQALVDVRGYRLPSWLSEITDSQYILLPEIIDISTEPFTTTLGLWDNDPMRNFHIRVSLF HHHHHHHCCCCCHHHHHHHCCCCEEEECHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEE HGISGEKIWSQQYSQSAEWEFKRQQTVNSNSENFWSSEYGQAIDQVLAKVSHDIDSSLNC ECCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC RPLLGQVVSRQANRIILNLGRRHGIRVGDTLQLVLQQNMPDRLDNMRAVVGKSKASITID HHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHH QVTEESATAVLDGIAASLNIQINDLAIKL HHHHHHHHHHHHHHHEEEEEEEEEEEEEC >Mature Secondary Structure MKSAQYFTTALLCLASSGLTLPVQAKWISASGQATITDNNVNQARENAIHQAVSYATLQS CCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHC GARFSSQQTVRNGQLVNDSFILEQQAQSQNVELVSELIEDGQITVNVRIDMMEPLNDTCQ CCCCCCHHHHCCCCEECCHHHHHHHHHCCCHHHHHHHHHCCEEEEEEEEEECCCCCHHHH ATQLKAAILIPQALIKDRTQLRYGNIGLFEQNLSERLASTLEQNASNSFPQTHANERLDI HHHHHHHHHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH DQALVDVRGYRLPSWLSEITDSQYILLPEIIDISTEPFTTTLGLWDNDPMRNFHIRVSLF HHHHHHHCCCCCHHHHHHHCCCCEEEECHHHCCCCCCCEEEEECCCCCCCCEEEEEEEEE HGISGEKIWSQQYSQSAEWEFKRQQTVNSNSENFWSSEYGQAIDQVLAKVSHDIDSSLNC ECCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC RPLLGQVVSRQANRIILNLGRRHGIRVGDTLQLVLQQNMPDRLDNMRAVVGKSKASITID HHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEHH QVTEESATAVLDGIAASLNIQINDLAIKL HHHHHHHHHHHHHHHEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA