| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is guaB [H]
Identifier: 157961141
GI number: 157961141
Start: 1599278
End: 1600750
Strand: Direct
Name: guaB [H]
Synonym: Spea_1313
Alternate gene names: 157961141
Gene position: 1599278-1600750 (Clockwise)
Preceding gene: 157961137
Following gene: 157961142
Centisome position: 30.91
GC content: 46.84
Gene sequence:
>1473_bases ATGTTAAGATTGAAAAAAGAAGCGTTAACTTTTGATGATGTGTTGCTGGTTCCAGCGCACTCTACCGTCCTCCCAAATAC AGCTGTTTTAAAAACACGCCTGACGAATAAGATTGAGTTGAATACTCCAATCGTTTCTGCTGCTATGGATACCGTTACTG AAGCTCGCTTGGCAATTGCTATTGCTCAAGAAGGTGGCCTTGGCTTTATCCATAAGAACATGACGATTGAGCAACAAGCT GAAGAAGTTCGCAAAGTAAAAATTTACGAAGCGGGTATCGTTCAGCAACCTGTGACAGTCACCCCTGCAACGACACTAGC CGATGTTAAGGTTCTGACTGAAAGAAATGGTTTCGCAGGTTACCCAGTGGTAAATGAAGCAAACGAGTTAGTGGGTATTA TCACTGGCCGTGACGTACGCTTTATCACTGACTGGTCGCGTACCGTTGATCAAGTGATGACACCAAAAGAGCGCCTTGTG ACAGTGCCAGAAGGGACTAAGCTAGATGAAGTTCAAAAACTGATGCATTCTCACCGTGTTGAGAAAGTATTGGTTGTTGA TGACAACTTCAAGCTAAAGGGTCTTATCACTGTAAAAGACTTCCAAAAAGCAGAGCGTAAGCCAAACGCATGTAAAGACG AGTTAGGTCGTTTACGTGTAGGTGCGGCTGTTGGTGCAGGTCCAGGTAACGAAGAGCGTGTTGATGCACTTGTGCTAGCT GGCGTTGACGTCTTACTTATCGACTCATCTCACGGCCATTCAGAAGGCGTTTTACAACGTATTCGTGATACTCGTGCTAA ATACCCGGACTTACAAATCGTTGGCGGTAACGTTGCAACAGCTGAAGGTGCAATTGCACTCGTTGAAGCGGGCGTTAACG CAGTTAAAGTCGGTATTGGCCCTGGTTCAATCTGTACCACGCGTATCGTAACGGGTGTGGGTGTACCACAAATTACAGCG GTATCTGATGCCGCTGCTGCCGTTAAGCACTTAGACATTCCAGTTATTGCCGATGGCGGTATTCGCTTCTCTGGCGACCT AGCAAAAGCATTGGCTGCTGGCGCGTCGTGCATCATGGCAGGCTCTATGTTTGCAGGTACCGATGAAGCGCCAGGTGAAA CTGAGCTTTATAACGGCCGTGCTTATAAGTCATACCGCGGTATGGGTTCACTAGGCGCTATGACCCAAACTCAAGGTTCG TCTGATCGTTATTTCCAAAGCGATAACGCTGCAGACAAGCTAGTACCTGAAGGTATTGAAGGTCGCGTTGCTTACAAAGG TAAGCTAAAAGAGATCATTCACCAGCATATGGGCGGTCTACGTTCATGCATGGGTCTAACTGGCTGCGCAACGATTAAAG AACTAAACGAGAAGGCTGAGTTTGTGAAAATCACTGCAGCGGGCATGGGCGAGTCTCATGTTCACGATGTGACGATTAGT AAAGAAGCACCTAACTACAGCACTCGTTCTTAA
Upstream 100 bases:
>100_bases CGAATTAGTGTCTATTTTCCATTTACCAACCCCGATATGCAAGGTATAATCTCGCCGCAATATTTCACCTCTAATTCCTA ATCTCTTGGGGAGATGTTGC
Downstream 100 bases:
>100_bases ATAGTGTTCTAAATCTTAAAGGCGACATATAATGTCGCCTTTAAATTAAGCCAAGTAGTAGATTCGCAGAGTACTCACTG CTTGGTTAGTTAACAATAAA
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MLRLKKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNKIELNTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQA EEVRKVKIYEAGIVQQPVTVTPATTLADVKVLTERNGFAGYPVVNEANELVGIITGRDVRFITDWSRTVDQVMTPKERLV TVPEGTKLDEVQKLMHSHRVEKVLVVDDNFKLKGLITVKDFQKAERKPNACKDELGRLRVGAAVGAGPGNEERVDALVLA GVDVLLIDSSHGHSEGVLQRIRDTRAKYPDLQIVGGNVATAEGAIALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAVKHLDIPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTDEAPGETELYNGRAYKSYRGMGSLGAMTQTQGS SDRYFQSDNAADKLVPEGIEGRVAYKGKLKEIIHQHMGGLRSCMGLTGCATIKELNEKAEFVKITAAGMGESHVHDVTIS KEAPNYSTRS
Sequences:
>Translated_490_residues MLRLKKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNKIELNTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQA EEVRKVKIYEAGIVQQPVTVTPATTLADVKVLTERNGFAGYPVVNEANELVGIITGRDVRFITDWSRTVDQVMTPKERLV TVPEGTKLDEVQKLMHSHRVEKVLVVDDNFKLKGLITVKDFQKAERKPNACKDELGRLRVGAAVGAGPGNEERVDALVLA GVDVLLIDSSHGHSEGVLQRIRDTRAKYPDLQIVGGNVATAEGAIALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAVKHLDIPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTDEAPGETELYNGRAYKSYRGMGSLGAMTQTQGS SDRYFQSDNAADKLVPEGIEGRVAYKGKLKEIIHQHMGGLRSCMGLTGCATIKELNEKAEFVKITAAGMGESHVHDVTIS KEAPNYSTRS >Mature_490_residues MLRLKKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNKIELNTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQA EEVRKVKIYEAGIVQQPVTVTPATTLADVKVLTERNGFAGYPVVNEANELVGIITGRDVRFITDWSRTVDQVMTPKERLV TVPEGTKLDEVQKLMHSHRVEKVLVVDDNFKLKGLITVKDFQKAERKPNACKDELGRLRVGAAVGAGPGNEERVDALVLA GVDVLLIDSSHGHSEGVLQRIRDTRAKYPDLQIVGGNVATAEGAIALVEAGVNAVKVGIGPGSICTTRIVTGVGVPQITA VSDAAAAVKHLDIPVIADGGIRFSGDLAKALAAGASCIMAGSMFAGTDEAPGETELYNGRAYKSYRGMGSLGAMTQTQGS SDRYFQSDNAADKLVPEGIEGRVAYKGKLKEIIHQHMGGLRSCMGLTGCATIKELNEKAEFVKITAAGMGESHVHDVTIS KEAPNYSTRS
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=482, Percent_Identity=40.6639004149378, Blast_Score=337, Evalue=2e-92, Organism=Homo sapiens, GI217035146, Length=480, Percent_Identity=40, Blast_Score=334, Evalue=1e-91, Organism=Homo sapiens, GI34328930, Length=480, Percent_Identity=40, Blast_Score=333, Evalue=3e-91, Organism=Homo sapiens, GI34328928, Length=480, Percent_Identity=40, Blast_Score=333, Evalue=3e-91, Organism=Homo sapiens, GI156616279, Length=480, Percent_Identity=40, Blast_Score=332, Evalue=4e-91, Organism=Homo sapiens, GI217035152, Length=486, Percent_Identity=39.7119341563786, Blast_Score=327, Evalue=1e-89, Organism=Homo sapiens, GI217035148, Length=480, Percent_Identity=38.9583333333333, Blast_Score=318, Evalue=5e-87, Organism=Homo sapiens, GI217035150, Length=480, Percent_Identity=36.4583333333333, Blast_Score=290, Evalue=2e-78, Organism=Homo sapiens, GI156104880, Length=248, Percent_Identity=38.3064516129032, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI50541956, Length=249, Percent_Identity=36.5461847389558, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI50541954, Length=249, Percent_Identity=36.9477911646586, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI50541952, Length=249, Percent_Identity=36.9477911646586, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI50541948, Length=249, Percent_Identity=36.9477911646586, Blast_Score=159, Evalue=6e-39, Organism=Escherichia coli, GI1788855, Length=486, Percent_Identity=79.4238683127572, Blast_Score=724, Evalue=0.0, Organism=Escherichia coli, GI1786293, Length=223, Percent_Identity=35.4260089686099, Blast_Score=138, Evalue=7e-34, Organism=Caenorhabditis elegans, GI71994385, Length=477, Percent_Identity=36.0587002096436, Blast_Score=266, Evalue=3e-71, Organism=Caenorhabditis elegans, GI71994389, Length=422, Percent_Identity=38.3886255924171, Blast_Score=256, Evalue=3e-68, Organism=Caenorhabditis elegans, GI17560440, Length=246, Percent_Identity=36.9918699186992, Blast_Score=158, Evalue=5e-39, Organism=Saccharomyces cerevisiae, GI6323585, Length=484, Percent_Identity=40.495867768595, Blast_Score=342, Evalue=1e-94, Organism=Saccharomyces cerevisiae, GI6323464, Length=482, Percent_Identity=40.2489626556017, Blast_Score=326, Evalue=4e-90, Organism=Saccharomyces cerevisiae, GI6322012, Length=482, Percent_Identity=37.9668049792531, Blast_Score=322, Evalue=6e-89, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=38.7573964497041, Blast_Score=242, Evalue=9e-65, Organism=Saccharomyces cerevisiae, GI6319353, Length=122, Percent_Identity=38.5245901639344, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24641071, Length=483, Percent_Identity=38.9233954451346, Blast_Score=311, Evalue=6e-85, Organism=Drosophila melanogaster, GI24641073, Length=483, Percent_Identity=38.9233954451346, Blast_Score=311, Evalue=6e-85, Organism=Drosophila melanogaster, GI28571163, Length=441, Percent_Identity=39.6825396825397, Blast_Score=285, Evalue=5e-77,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52199; Mature: 52199
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLKKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNKIELNTPIVSAAMDTVTEARLAIA CCEECCHHCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHCEEEEE IAQEGGLGFIHKNMTIEQQAEEVRKVKIYEAGIVQQPVTVTPATTLADVKVLTERNGFAG EECCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCCCEEECCCCHHHHEEEEECCCCCCC YPVVNEANELVGIITGRDVRFITDWSRTVDQVMTPKERLVTVPEGTKLDEVQKLMHSHRV CCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCHHHEEECCCCCCHHHHHHHHHHCCC EKVLVVDDNFKLKGLITVKDFQKAERKPNACKDELGRLRVGAAVGAGPGNEERVDALVLA CEEEEECCCEEEEEEEEEHHHHHHHCCCCHHHHHHCCEEEEEEECCCCCCHHHHHEEEEE GVDVLLIDSSHGHSEGVLQRIRDTRAKYPDLQIVGGNVATAEGAIALVEAGVNAVKVGIG CCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCCCEEEEECCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAAAAVKHLDIPVIADGGIRFSGDLAKALAAGASCIMA CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHCCCHHEEE GSMFAGTDEAPGETELYNGRAYKSYRGMGSLGAMTQTQGSSDRYFQSDNAADKLVPEGIE CCEECCCCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHCCCCCCC GRVAYKGKLKEIIHQHMGGLRSCMGLTGCATIKELNEKAEFVKITAAGMGESHVHDVTIS CEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEE KEAPNYSTRS CCCCCCCCCC >Mature Secondary Structure MLRLKKEALTFDDVLLVPAHSTVLPNTAVLKTRLTNKIELNTPIVSAAMDTVTEARLAIA CCEECCHHCCCCCEEEEECCCCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHCEEEEE IAQEGGLGFIHKNMTIEQQAEEVRKVKIYEAGIVQQPVTVTPATTLADVKVLTERNGFAG EECCCCEEEEECCCCHHHHHHHHHEEEEEECCCCCCCEEECCCCHHHHEEEEECCCCCCC YPVVNEANELVGIITGRDVRFITDWSRTVDQVMTPKERLVTVPEGTKLDEVQKLMHSHRV CCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHCCHHHEEECCCCCCHHHHHHHHHHCCC EKVLVVDDNFKLKGLITVKDFQKAERKPNACKDELGRLRVGAAVGAGPGNEERVDALVLA CEEEEECCCEEEEEEEEEHHHHHHHCCCCHHHHHHCCEEEEEEECCCCCCHHHHHEEEEE GVDVLLIDSSHGHSEGVLQRIRDTRAKYPDLQIVGGNVATAEGAIALVEAGVNAVKVGIG CCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCEEECCCCEEEEECCCCEEEEECC PGSICTTRIVTGVGVPQITAVSDAAAAVKHLDIPVIADGGIRFSGDLAKALAAGASCIMA CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHCCCHHEEE GSMFAGTDEAPGETELYNGRAYKSYRGMGSLGAMTQTQGSSDRYFQSDNAADKLVPEGIE CCEECCCCCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHCCCCCCC GRVAYKGKLKEIIHQHMGGLRSCMGLTGCATIKELNEKAEFVKITAAGMGESHVHDVTIS CEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEE KEAPNYSTRS CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]