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The map label for this gene is rodZ [H]

Identifier: 157961132

GI number: 157961132

Start: 1588165

End: 1589130

Strand: Direct

Name: rodZ [H]

Synonym: Spea_1304

Alternate gene names: 157961132

Gene position: 1588165-1589130 (Clockwise)

Preceding gene: 157961131

Following gene: 157961133

Centisome position: 30.69

GC content: 48.76

Gene sequence:

>966_bases
ATGAAAAATGAACAGAATCAAGAGCCCAATGTAGATAATGAAAGCCTAGTGGATGAGCCGACGCTCACACTGGGCGTTTT
GCTAAAAACAGCCCGCGAAAATAAGGGGCTGTCGATAGAGGCGATTGCAGCACAATTGCATTTACGTCCCACTATCGTGC
AAGAGATTGAGGCCGATAATTTAGAGGCAGTTGGCGCAGCAACTTATGTGCGCGGCTATGTGAAAAACTACGCTCGGGCA
GTGCAGGCCGACCCGTTTACCGTACAAGAGTGCTTAAATAAGCAACTTGCGAATGACGATGAGCCATCGATGCAGAGTTT
TTCTCGCAAGACCACACGTCAGGCTCGTGATGGCCGCTTGATGGCGTTGACCTATCTTATCGTGTTTGTGCTGTTAGCAT
TAATGGTCTGGTGGTGGTTCCAAAAGTCTTCGCTAGAGACTGCGGTTGATTATTCACAACCAACGGCAGAAGAGGTGGCA
GCATCGGTACAGCTACCTGATTCGAGCCCTGCTGAGCCATTGCTGGTTGCTCATCAAGATTCTGCTGTTGAACAGTTCTC
AGAAGCTGTTGATGAGGCATCGCAACTTGCGAATGAGGGCAGCCAAGCTGAAACTGATTTTACAGCGGTGCTCTCTGAGC
CTGTTTTAGCTGAAACGGTTCAATCAGATACTTCTTCTGCAGACATAGCACCGTCTGTTACAACAGATGCCACAGCAGGC
TCATCGCTAAAATTAAGCCTAACAGGAGACTGCTGGATTAAAATCGCCGATGCGACAGGCAAGACCCTAGTCAGCGATCT
TAGGAAAGCCGGTAGCGAGATTAACTTAGTTGGGGCAGAGCCGTTTTCGGTGACGTTAGGCGCCCCTCAAGTAGTCAATA
TCCAACTAAATGGTAAAGCGATTAGTTTGGAGCAGTATCCTAGCGGTAAGGTGGCGAGATTAACGTTGCCACTCGCAGGA
CAATAA

Upstream 100 bases:

>100_bases
GTTTGAATGACCAAGAAGCGGTTAGACGGTTCGGTATCTTACTACTGGCAAAGTTTCCGCAGTCTGTTCAGGCCAAAGAA
TATCGGGCTAGTATGCATTA

Downstream 100 bases:

>100_bases
CGGATCACAGAGCACAAAACGATGTATAACGAATCTCCTATTATCAGACGCAAATCAAGCCGCATTTATGTAGGCAATGT
ACCTATTGGTGATGGTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARENKGLSIEAIAAQLHLRPTIVQEIEADNLEAVGAATYVRGYVKNYARA
VQADPFTVQECLNKQLANDDEPSMQSFSRKTTRQARDGRLMALTYLIVFVLLALMVWWWFQKSSLETAVDYSQPTAEEVA
ASVQLPDSSPAEPLLVAHQDSAVEQFSEAVDEASQLANEGSQAETDFTAVLSEPVLAETVQSDTSSADIAPSVTTDATAG
SSLKLSLTGDCWIKIADATGKTLVSDLRKAGSEINLVGAEPFSVTLGAPQVVNIQLNGKAISLEQYPSGKVARLTLPLAG
Q

Sequences:

>Translated_321_residues
MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARENKGLSIEAIAAQLHLRPTIVQEIEADNLEAVGAATYVRGYVKNYARA
VQADPFTVQECLNKQLANDDEPSMQSFSRKTTRQARDGRLMALTYLIVFVLLALMVWWWFQKSSLETAVDYSQPTAEEVA
ASVQLPDSSPAEPLLVAHQDSAVEQFSEAVDEASQLANEGSQAETDFTAVLSEPVLAETVQSDTSSADIAPSVTTDATAG
SSLKLSLTGDCWIKIADATGKTLVSDLRKAGSEINLVGAEPFSVTLGAPQVVNIQLNGKAISLEQYPSGKVARLTLPLAG
Q
>Mature_321_residues
MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARENKGLSIEAIAAQLHLRPTIVQEIEADNLEAVGAATYVRGYVKNYARA
VQADPFTVQECLNKQLANDDEPSMQSFSRKTTRQARDGRLMALTYLIVFVLLALMVWWWFQKSSLETAVDYSQPTAEEVA
ASVQLPDSSPAEPLLVAHQDSAVEQFSEAVDEASQLANEGSQAETDFTAVLSEPVLAETVQSDTSSADIAPSVTTDATAG
SSLKLSLTGDCWIKIADATGKTLVSDLRKAGSEINLVGAEPFSVTLGAPQVVNIQLNGKAISLEQYPSGKVARLTLPLAG
Q

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=318, Percent_Identity=32.3899371069182, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 34493; Mature: 34493

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARENKGLSIEAIAAQLHLRPTIVQEIEADN
CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCC
LEAVGAATYVRGYVKNYARAVQADPFTVQECLNKQLANDDEPSMQSFSRKTTRQARDGRL
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH
MALTYLIVFVLLALMVWWWFQKSSLETAVDYSQPTAEEVAASVQLPDSSPAEPLLVAHQD
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHEEECCCCCCCCCEEEECCH
SAVEQFSEAVDEASQLANEGSQAETDFTAVLSEPVLAETVQSDTSSADIAPSVTTDATAG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
SSLKLSLTGDCWIKIADATGKTLVSDLRKAGSEINLVGAEPFSVTLGAPQVVNIQLNGKA
CEEEEEEECCEEEEEECCCCHHHHHHHHHCCCEEEEEECCCEEEEECCCEEEEEEECCEE
ISLEQYPSGKVARLTLPLAGQ
EEEECCCCCCEEEEEECCCCC
>Mature Secondary Structure
MKNEQNQEPNVDNESLVDEPTLTLGVLLKTARENKGLSIEAIAAQLHLRPTIVQEIEADN
CCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHCCCC
LEAVGAATYVRGYVKNYARAVQADPFTVQECLNKQLANDDEPSMQSFSRKTTRQARDGRL
CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH
MALTYLIVFVLLALMVWWWFQKSSLETAVDYSQPTAEEVAASVQLPDSSPAEPLLVAHQD
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHEEECCCCCCCCCEEEECCH
SAVEQFSEAVDEASQLANEGSQAETDFTAVLSEPVLAETVQSDTSSADIAPSVTTDATAG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
SSLKLSLTGDCWIKIADATGKTLVSDLRKAGSEINLVGAEPFSVTLGAPQVVNIQLNGKA
CEEEEEEECCEEEEEECCCCHHHHHHHHHCCCEEEEEECCCEEEEECCCEEEEEEECCEE
ISLEQYPSGKVARLTLPLAGQ
EEEECCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA