Click here to switch to the map view.

The map label for this gene is 157961131

Identifier: 157961131

GI number: 157961131

Start: 1587365

End: 1588165

Strand: Direct

Name: 157961131

Synonym: Spea_1303

Alternate gene names: NA

Gene position: 1587365-1588165 (Clockwise)

Preceding gene: 157961130

Following gene: 157961132

Centisome position: 30.68

GC content: 44.44

Gene sequence:

>801_bases
ATGGGCTTAAAAATGAATCAGAGTAAGCTGGTATTGCCGCTGGTATTAATCCTGTCGTCAGTGATGACAACAGGGTGTGT
TACCCAAGATACCTATGCGGGTACCGATACGCCAGTCTCTGAAAGAAAAGTGGATAAAGTTGCCGCTGCACGTCAGCGAA
TACAACTTGGTCTGACCTATCTACAAAAAGGCAATAGTGAACAAGCCAAAGCCAACCTCGATCGAGCATTGGCTTTTGCA
CCCAATTTGGAAGAAGTGCACATTGCTTTTGCTTATTACTACCAGTCTGTCGGTGAATTAGAAAAAACAGAGCAAGCATA
CAGAGAAGCGATCGACTCAAGTGATGCAACGGGTGATTCATACAATAACTTCGGTGCATTTTTGTGTCAGCAAGGTAAAT
ATGCTGAGTCTGAGAAGATGTTTCTAAAAGCTGTTGACCAGCCTCTGTATACCCGTTCGGCTTCAACCTATGAAAACCTC
GGTATTTGTAGCCGTAAAGCCGGACAAATGAGTAAAGCGCAGTCTTATTTTGCGATGGCACTAAACTACGATCCTAGAAG
ACGTACCTCACTAATCGAGCTGACAGAGATCGATTATGAAGAGGGCAAATATGCCGAGGCGAGAGAACAACTTTCTCGCT
ATCATAGAGTGGCTGCAGAATCTGCAGGCAGTTTGGCACTCGGGATTAAAATTGAACAAGGTTTGAATGACCAAGAAGCG
GTTAGACGGTTCGGTATCTTACTACTGGCAAAGTTTCCGCAGTCTGTTCAGGCCAAAGAATATCGGGCTAGTATGCATTA
A

Upstream 100 bases:

>100_bases
CGCGATAGAACCAAACGTTTAGCAAAAAAACAAATGCAACAAAATCAAATTTCAGTCACAATAAACTAACTCTTTGTATC
TACTGATAGATGACTGTTAG

Downstream 100 bases:

>100_bases
TGAAAAATGAACAGAATCAAGAGCCCAATGTAGATAATGAAAGCCTAGTGGATGAGCCGACGCTCACACTGGGCGTTTTG
CTAAAAACAGCCCGCGAAAA

Product: type IV pilus biogenesis/stability protein PilW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MGLKMNQSKLVLPLVLILSSVMTTGCVTQDTYAGTDTPVSERKVDKVAAARQRIQLGLTYLQKGNSEQAKANLDRALAFA
PNLEEVHIAFAYYYQSVGELEKTEQAYREAIDSSDATGDSYNNFGAFLCQQGKYAESEKMFLKAVDQPLYTRSASTYENL
GICSRKAGQMSKAQSYFAMALNYDPRRRTSLIELTEIDYEEGKYAEAREQLSRYHRVAAESAGSLALGIKIEQGLNDQEA
VRRFGILLLAKFPQSVQAKEYRASMH

Sequences:

>Translated_266_residues
MGLKMNQSKLVLPLVLILSSVMTTGCVTQDTYAGTDTPVSERKVDKVAAARQRIQLGLTYLQKGNSEQAKANLDRALAFA
PNLEEVHIAFAYYYQSVGELEKTEQAYREAIDSSDATGDSYNNFGAFLCQQGKYAESEKMFLKAVDQPLYTRSASTYENL
GICSRKAGQMSKAQSYFAMALNYDPRRRTSLIELTEIDYEEGKYAEAREQLSRYHRVAAESAGSLALGIKIEQGLNDQEA
VRRFGILLLAKFPQSVQAKEYRASMH
>Mature_265_residues
GLKMNQSKLVLPLVLILSSVMTTGCVTQDTYAGTDTPVSERKVDKVAAARQRIQLGLTYLQKGNSEQAKANLDRALAFAP
NLEEVHIAFAYYYQSVGELEKTEQAYREAIDSSDATGDSYNNFGAFLCQQGKYAESEKMFLKAVDQPLYTRSASTYENLG
ICSRKAGQMSKAQSYFAMALNYDPRRRTSLIELTEIDYEEGKYAEAREQLSRYHRVAAESAGSLALGIKIEQGLNDQEAV
RRFGILLLAKFPQSVQAKEYRASMH

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013360
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29695; Mature: 29564

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLKMNQSKLVLPLVLILSSVMTTGCVTQDTYAGTDTPVSERKVDKVAAARQRIQLGLTY
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LQKGNSEQAKANLDRALAFAPNLEEVHIAFAYYYQSVGELEKTEQAYREAIDSSDATGDS
HHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YNNFGAFLCQQGKYAESEKMFLKAVDQPLYTRSASTYENLGICSRKAGQMSKAQSYFAMA
CCHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHCCCHHHHHCCHHHHHHHHHHE
LNYDPRRRTSLIELTEIDYEEGKYAEAREQLSRYHRVAAESAGSLALGIKIEQGLNDQEA
ECCCCHHHHHEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH
VRRFGILLLAKFPQSVQAKEYRASMH
HHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
GLKMNQSKLVLPLVLILSSVMTTGCVTQDTYAGTDTPVSERKVDKVAAARQRIQLGLTY
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LQKGNSEQAKANLDRALAFAPNLEEVHIAFAYYYQSVGELEKTEQAYREAIDSSDATGDS
HHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YNNFGAFLCQQGKYAESEKMFLKAVDQPLYTRSASTYENLGICSRKAGQMSKAQSYFAMA
CCHHHHHHHCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHCCCHHHHHCCHHHHHHHHHHE
LNYDPRRRTSLIELTEIDYEEGKYAEAREQLSRYHRVAAESAGSLALGIKIEQGLNDQEA
ECCCCHHHHHEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHH
VRRFGILLLAKFPQSVQAKEYRASMH
HHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]