Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960981

Identifier: 157960981

GI number: 157960981

Start: 1394863

End: 1395291

Strand: Reverse

Name: 157960981

Synonym: Spea_1153

Alternate gene names: NA

Gene position: 1395291-1394863 (Counterclockwise)

Preceding gene: 157960982

Following gene: 157960980

Centisome position: 26.96

GC content: 40.09

Gene sequence:

>429_bases
ATGTGGTCAGTTCAAAGCCACTCAGGCTTTTCAATTCAAGGCGTATTGATGAAGAAATGGTTATTCCCTTTTAAATTAGT
GCAACGTAGAAGTGGAATGCCTGAGAGGCTCACGCAGTGCGGGTTTCAAAGCCCTGTATACTGCGTAAGATGCTCTCGAT
ATAGAATAACTATTAGCTTCAATCATCCGCCTTGCCTACAGGGCTTTGACTTCCCGCTGAATGATCACATATTTAATGTG
ATTGGTATAATGAGCCATTTTAGGCTGGTAATCGTACTTGATGTCATAAAATTACAAGTTCGGGAAGATGGATCCAACTT
TCGACCGAATTCTCGCCAAACCCTGCCGATTATTAGAGGAAGATCACACCTTTATTTCATTGCTGTTGGTACTTTAATTA
CCAGAAAAGATAACAACTTTGAACATTAA

Upstream 100 bases:

>100_bases
AATACTCATCTGAGTCCAACTATTGGGTTTCTGTAGGCCACATGGCATGGAAATCTTTGAATAAACTTGTTTTCAGCAAT
TAATACCAATCGTACTAAAT

Downstream 100 bases:

>100_bases
GCATAATAGGTGATTCTTATGGCTGCTAAATTTTTTATCCCATCTGTCAATATCTTAGGTCAAGATGCCGTAACTGAAGC
CATTGGTGACATCAAGTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MWSVQSHSGFSIQGVLMKKWLFPFKLVQRRSGMPERLTQCGFQSPVYCVRCSRYRITISFNHPPCLQGFDFPLNDHIFNV
IGIMSHFRLVIVLDVIKLQVREDGSNFRPNSRQTLPIIRGRSHLYFIAVGTLITRKDNNFEH

Sequences:

>Translated_142_residues
MWSVQSHSGFSIQGVLMKKWLFPFKLVQRRSGMPERLTQCGFQSPVYCVRCSRYRITISFNHPPCLQGFDFPLNDHIFNV
IGIMSHFRLVIVLDVIKLQVREDGSNFRPNSRQTLPIIRGRSHLYFIAVGTLITRKDNNFEH
>Mature_142_residues
MWSVQSHSGFSIQGVLMKKWLFPFKLVQRRSGMPERLTQCGFQSPVYCVRCSRYRITISFNHPPCLQGFDFPLNDHIFNV
IGIMSHFRLVIVLDVIKLQVREDGSNFRPNSRQTLPIIRGRSHLYFIAVGTLITRKDNNFEH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16583; Mature: 16583

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWSVQSHSGFSIQGVLMKKWLFPFKLVQRRSGMPERLTQCGFQSPVYCVRCSRYRITISF
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECEEEEEEEE
NHPPCLQGFDFPLNDHIFNVIGIMSHFRLVIVLDVIKLQVREDGSNFRPNSRQTLPIIRG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEC
RSHLYFIAVGTLITRKDNNFEH
CCEEEEEEEEEEEEECCCCCCC
>Mature Secondary Structure
MWSVQSHSGFSIQGVLMKKWLFPFKLVQRRSGMPERLTQCGFQSPVYCVRCSRYRITISF
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEECEEEEEEEE
NHPPCLQGFDFPLNDHIFNVIGIMSHFRLVIVLDVIKLQVREDGSNFRPNSRQTLPIIRG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEEEC
RSHLYFIAVGTLITRKDNNFEH
CCEEEEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA