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The map label for this gene is betI [H]

Identifier: 157960837

GI number: 157960837

Start: 1227003

End: 1227608

Strand: Reverse

Name: betI [H]

Synonym: Spea_1009

Alternate gene names: 157960837

Gene position: 1227608-1227003 (Counterclockwise)

Preceding gene: 157960839

Following gene: 157960836

Centisome position: 23.72

GC content: 49.01

Gene sequence:

>606_bases
ATGCCGCGCCCGCCAATGAAAACCGTTCGACAGCAACAACTCATCGAAGCCACTCTAGTCTCAGTTGAGCGCCACGGTTT
ACACAACACCACCATCAATACCATTAGCGGTTTGGCCGGTTTATCATCAGGGCTCATCAGTCACTACTTCGGTGGCAAGC
AAGGCCTGATTGAAGCAACCCAAAAATATCTATTAGAACAACTTAAACAAGCATTACTTAGCCGCACCTCAGGCAAGACA
ATGCTGCCGCTAGAAAGGCTACATGCGATAGTGGAGGCCAATTTTACTGAGTTGCAACGCTCAAGGCCTGCCACTAAGAC
TTGGTTATGCTTCTGGTCACAAGCCATGCATGAGCAAGGGCTTGCCAGACTACAGCACATCAATAGCCAGCGTTTATATA
GCAATCTTTTGTTCTCTTTCAAAAAACTTCTTCCTAAAACCCAAGCCGTTACCGCTGCCAAGCAAACCGCAGCAATGATC
GACGGCTTCTGGCTCCGCAGCGCCTTAAGCCCGACCCCTGAGAAAGAGTTCGAGCAGGCCCAAATTCTATCTAAAGCCTT
TATCGAGGCGGTGATCATGCAGTACGGAGAAAACCGATGTCACTAG

Upstream 100 bases:

>100_bases
TTATTAATTGAACGTTCAATCAACAATAAAAATCACAAAATAACAATAAAAATAACAACAGAAATAACATTCAATCACTG
TACTCAGGAATTTGCTTTTT

Downstream 100 bases:

>100_bases
TCGTTTATGCCAACTATATCCACGGCAAAGCCCTCAAAAATACCACAGGCGAAACCTTTGAAGTCATCAATCCAGCCAAT
GGAGAAGTGAGCTACTTAGT

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MPRPPMKTVRQQQLIEATLVSVERHGLHNTTINTISGLAGLSSGLISHYFGGKQGLIEATQKYLLEQLKQALLSRTSGKT
MLPLERLHAIVEANFTELQRSRPATKTWLCFWSQAMHEQGLARLQHINSQRLYSNLLFSFKKLLPKTQAVTAAKQTAAMI
DGFWLRSALSPTPEKEFEQAQILSKAFIEAVIMQYGENRCH

Sequences:

>Translated_201_residues
MPRPPMKTVRQQQLIEATLVSVERHGLHNTTINTISGLAGLSSGLISHYFGGKQGLIEATQKYLLEQLKQALLSRTSGKT
MLPLERLHAIVEANFTELQRSRPATKTWLCFWSQAMHEQGLARLQHINSQRLYSNLLFSFKKLLPKTQAVTAAKQTAAMI
DGFWLRSALSPTPEKEFEQAQILSKAFIEAVIMQYGENRCH
>Mature_200_residues
PRPPMKTVRQQQLIEATLVSVERHGLHNTTINTISGLAGLSSGLISHYFGGKQGLIEATQKYLLEQLKQALLSRTSGKTM
LPLERLHAIVEANFTELQRSRPATKTWLCFWSQAMHEQGLARLQHINSQRLYSNLLFSFKKLLPKTQAVTAAKQTAAMID
GFWLRSALSPTPEKEFEQAQILSKAFIEAVIMQYGENRCH

Specific function: Repressor involved in choline regulation of the bet genes [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786505, Length=189, Percent_Identity=45.5026455026455, Blast_Score=161, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22675; Mature: 22543

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPPMKTVRQQQLIEATLVSVERHGLHNTTINTISGLAGLSSGLISHYFGGKQGLIEAT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QKYLLEQLKQALLSRTSGKTMLPLERLHAIVEANFTELQRSRPATKTWLCFWSQAMHEQG
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LARLQHINSQRLYSNLLFSFKKLLPKTQAVTAAKQTAAMIDGFWLRSALSPTPEKEFEQA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
QILSKAFIEAVIMQYGENRCH
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PRPPMKTVRQQQLIEATLVSVERHGLHNTTINTISGLAGLSSGLISHYFGGKQGLIEAT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QKYLLEQLKQALLSRTSGKTMLPLERLHAIVEANFTELQRSRPATKTWLCFWSQAMHEQG
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LARLQHINSQRLYSNLLFSFKKLLPKTQAVTAAKQTAAMIDGFWLRSALSPTPEKEFEQA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
QILSKAFIEAVIMQYGENRCH
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA