Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960815

Identifier: 157960815

GI number: 157960815

Start: 1199704

End: 1200084

Strand: Reverse

Name: 157960815

Synonym: Spea_0987

Alternate gene names: NA

Gene position: 1200084-1199704 (Counterclockwise)

Preceding gene: 157960816

Following gene: 157960814

Centisome position: 23.19

GC content: 43.57

Gene sequence:

>381_bases
ATGAGCAACAAAAGCAAAAGCCTTAAGCAACTTACTGAAATGACCCCAGAAGCTCGCTACGACTACCTTGTAGAACAAGT
GAAAGAGCACCAAACACTTTGGTCATTACAAGATTTAGATGGTTGTGTAATGCTAACAACTGAAGAGGAAGATTGCATTC
CTATGTGGCCAACTGAAGAAGCAGCTGCGTCTTGGGCTGTTGATGATTGGGCTGATTGCCAAACTTTATCTATTCCTGTT
GATGAATGGCTAGAGCGTTGGGTGCCTGGTATGCAAGATGACGACTTATTTGTTGCTGTTTTCCCTGTGCAAGAAGATCT
AGGAGTGGTTATTCCTCCTTATGAGCTTGAAGAGCGCCTAGCTCCTAAAAAGCGTCACTAA

Upstream 100 bases:

>100_bases
TTTTCTTTTTCATTGGCCTGCTAGGTGCTATTATCCGTCTAAATCGGCGCGCTTTCCTTGTTTCAAGGCTCGCCTCATTT
AATATTAAGAGATGTAAACC

Downstream 100 bases:

>100_bases
TTGCTTAGATGATTTACCATGGTAAGCCTCACGGCTTACCATGTTCTAGCTTTTATCTGCTAACTTAAATAATAATGAGA
ACGTAAAAGTGGATAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSNKSKSLKQLTEMTPEARYDYLVEQVKEHQTLWSLQDLDGCVMLTTEEEDCIPMWPTEEAAASWAVDDWADCQTLSIPV
DEWLERWVPGMQDDDLFVAVFPVQEDLGVVIPPYELEERLAPKKRH

Sequences:

>Translated_126_residues
MSNKSKSLKQLTEMTPEARYDYLVEQVKEHQTLWSLQDLDGCVMLTTEEEDCIPMWPTEEAAASWAVDDWADCQTLSIPV
DEWLERWVPGMQDDDLFVAVFPVQEDLGVVIPPYELEERLAPKKRH
>Mature_125_residues
SNKSKSLKQLTEMTPEARYDYLVEQVKEHQTLWSLQDLDGCVMLTTEEEDCIPMWPTEEAAASWAVDDWADCQTLSIPVD
EWLERWVPGMQDDDLFVAVFPVQEDLGVVIPPYELEERLAPKKRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14627; Mature: 14495

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKSKSLKQLTEMTPEARYDYLVEQVKEHQTLWSLQDLDGCVMLTTEEEDCIPMWPTEE
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH
AAASWAVDDWADCQTLSIPVDEWLERWVPGMQDDDLFVAVFPVQEDLGVVIPPYELEERL
HHHHCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHC
APKKRH
CCCCCC
>Mature Secondary Structure 
SNKSKSLKQLTEMTPEARYDYLVEQVKEHQTLWSLQDLDGCVMLTTEEEDCIPMWPTEE
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH
AAASWAVDDWADCQTLSIPVDEWLERWVPGMQDDDLFVAVFPVQEDLGVVIPPYELEERL
HHHHCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHC
APKKRH
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA