| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960815
Identifier: 157960815
GI number: 157960815
Start: 1199704
End: 1200084
Strand: Reverse
Name: 157960815
Synonym: Spea_0987
Alternate gene names: NA
Gene position: 1200084-1199704 (Counterclockwise)
Preceding gene: 157960816
Following gene: 157960814
Centisome position: 23.19
GC content: 43.57
Gene sequence:
>381_bases ATGAGCAACAAAAGCAAAAGCCTTAAGCAACTTACTGAAATGACCCCAGAAGCTCGCTACGACTACCTTGTAGAACAAGT GAAAGAGCACCAAACACTTTGGTCATTACAAGATTTAGATGGTTGTGTAATGCTAACAACTGAAGAGGAAGATTGCATTC CTATGTGGCCAACTGAAGAAGCAGCTGCGTCTTGGGCTGTTGATGATTGGGCTGATTGCCAAACTTTATCTATTCCTGTT GATGAATGGCTAGAGCGTTGGGTGCCTGGTATGCAAGATGACGACTTATTTGTTGCTGTTTTCCCTGTGCAAGAAGATCT AGGAGTGGTTATTCCTCCTTATGAGCTTGAAGAGCGCCTAGCTCCTAAAAAGCGTCACTAA
Upstream 100 bases:
>100_bases TTTTCTTTTTCATTGGCCTGCTAGGTGCTATTATCCGTCTAAATCGGCGCGCTTTCCTTGTTTCAAGGCTCGCCTCATTT AATATTAAGAGATGTAAACC
Downstream 100 bases:
>100_bases TTGCTTAGATGATTTACCATGGTAAGCCTCACGGCTTACCATGTTCTAGCTTTTATCTGCTAACTTAAATAATAATGAGA ACGTAAAAGTGGATAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MSNKSKSLKQLTEMTPEARYDYLVEQVKEHQTLWSLQDLDGCVMLTTEEEDCIPMWPTEEAAASWAVDDWADCQTLSIPV DEWLERWVPGMQDDDLFVAVFPVQEDLGVVIPPYELEERLAPKKRH
Sequences:
>Translated_126_residues MSNKSKSLKQLTEMTPEARYDYLVEQVKEHQTLWSLQDLDGCVMLTTEEEDCIPMWPTEEAAASWAVDDWADCQTLSIPV DEWLERWVPGMQDDDLFVAVFPVQEDLGVVIPPYELEERLAPKKRH >Mature_125_residues SNKSKSLKQLTEMTPEARYDYLVEQVKEHQTLWSLQDLDGCVMLTTEEEDCIPMWPTEEAAASWAVDDWADCQTLSIPVD EWLERWVPGMQDDDLFVAVFPVQEDLGVVIPPYELEERLAPKKRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14627; Mature: 14495
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKSKSLKQLTEMTPEARYDYLVEQVKEHQTLWSLQDLDGCVMLTTEEEDCIPMWPTEE CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH AAASWAVDDWADCQTLSIPVDEWLERWVPGMQDDDLFVAVFPVQEDLGVVIPPYELEERL HHHHCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHC APKKRH CCCCCC >Mature Secondary Structure SNKSKSLKQLTEMTPEARYDYLVEQVKEHQTLWSLQDLDGCVMLTTEEEDCIPMWPTEE CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHH AAASWAVDDWADCQTLSIPVDEWLERWVPGMQDDDLFVAVFPVQEDLGVVIPPYELEERL HHHHCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEECCHHHHHHC APKKRH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA