BacMap

Definition	Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession	NC_009901
Length	5,174,581

Click here to switch to the map view.

The map label for this gene is hflB [C]

Identifier: 157960702

GI number: 157960702

Start: 1073338

End: 1074813

Strand: Direct

Name: hflB [C]

Synonym: Spea_0874

Alternate gene names: 157960702

Gene position: 1073338-1074813 (Clockwise)

Preceding gene: 157960701

Following gene: 157960704

Centisome position: 20.74

GC content: 45.87

Gene sequence:

>1476_bases
ATGCAAGATATTCAAGACCTTAGTGCTGTACTGCGCTCCAACACGCCTATTATCGTCATAGAGACCTATGAGGAGTATCG
GGTGATCGAATTACTTAGAAAAGTCTCTAATATCCTATATCAACCGCTGTTTAGTTGGAGTGTGACTCAGGGGTTGATGC
GAGTCGATAGTGGCTTGGGGCGACAGAAGTTTAACTGTGAACCTGGTGATATTCTTGGGCAGATAAAATCGACCAAGGAG
CAAGGCATTTATGTTTTATGCGATTTCCACCCATTTGTTGAGGACGCACCTAAAAATGTACGCTTACTGAAAGAGATAGC
TCTTGAATACGAAGCGTTAAAACATACCATAGTGCTAGTGAGTCATGAGTTTACTATCCCTCCTGAAATCAAACATTATT
GTGCACACTTTAGACTGTCACTCCCCAATACCGCTCAACTTTTAAACCTCATCTACGAACAAATCGACAAAGTCCGCAGC
GAGGGCATGATGCTGAATGTCGATGATGAAGCCGTGGCAAAACTGGCTGAAAACTTAAGAGGGGTGACCTTTGACGATGC
GAGGCGCTTAGCCCATAAGGCGATAGTCGATGATGGGGCGATTACTCACTCCGATATCGACAGTATTAACCGTGGTAAGT
TTGAGCTGCTAGATATGCAGGGGGTATTGCAGTTTGAGTATGATACCAGTGACTTTTCTCAGGTGGCGGGTTTACATAAT
CTTAAGCAATGGCTGAGCCATAGAACGCCATCAGCGCATACACAAATACTCGAAGATAAACCTAAAGGGATCTTATTACT
TGGCGTGCAAGGTAGCGGTAAGAGTCTAGCAGCAAAGGCGGTAGCTGGCATGTGGCAAAGACCACTGCTGAAGATGGATA
TGTCTGCGCTTTATAATAAATACATAGGTGAAACAGAAAAGAACCTGCGTAAGGCATTGGAACTTGCAGATTTGATGGCG
CCATGTGTGCTCTGGATAGATGAAATAGAAAAAGGTCTGAGTAGTGGTAGTGGTAGTGGTGACGATGGCACCTCACAGCG
AATTTTAGGTACCATTTTAACTTGGATGTCGGAGCGAAAATCAGATGTATTTCTGGTCGCTACTGCCAATGATATCAGTG
CATTACCACCAGAACTGATGCGTAAGGGGCGTATGGATGAAATCTTCTTTGTCGACCTGCCCGATGCCAATATCCGCCAA
GCTATTTTTCTTATTCATATTCAGCGACGTCAGCTTGAACCAACGCAGTTTGAGTTAGCTCAACTTGCTAAACTGAGTCA
GGGTTTCTCTGGTGCCGAAATCGAGCAGGCGGTGATCTCTGCCATATATACGGCAAAGGCGTTAGAGCGAGAGGTGGATC
AGAGCGCGCTGCTTGAGGAGCTGATGAAGACGCGGCCACTGTCAGTGGTCATGCGAGAGAAGTTGCAAGCCTTAAGGCAA
TGGGCTGAGGGGCGTACGGTTAATGCTCATCAATAG

Upstream 100 bases:

>100_bases
CAATGTTGAACTGCACTTGATATAAAGGGACCTTAGCGTCCCTTTTCTTTTGGGTAATATGCTAAAGCCATTAGCATCCG
ATATCTGTTCAAGGATTAAC

Downstream 100 bases:

>100_bases
CATTTTATCAATGGGTTAAGCCTAGGAAAGTCGCTCGAGTTTCCATAATTCTCTGAGGTAATAGTGTGATGAACCGAACG
AGCGAGGTTCGGTTTATCGT

Product: ATPase central domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MQDIQDLSAVLRSNTPIIVIETYEEYRVIELLRKVSNILYQPLFSWSVTQGLMRVDSGLGRQKFNCEPGDILGQIKSTKE
QGIYVLCDFHPFVEDAPKNVRLLKEIALEYEALKHTIVLVSHEFTIPPEIKHYCAHFRLSLPNTAQLLNLIYEQIDKVRS
EGMMLNVDDEAVAKLAENLRGVTFDDARRLAHKAIVDDGAITHSDIDSINRGKFELLDMQGVLQFEYDTSDFSQVAGLHN
LKQWLSHRTPSAHTQILEDKPKGILLLGVQGSGKSLAAKAVAGMWQRPLLKMDMSALYNKYIGETEKNLRKALELADLMA
PCVLWIDEIEKGLSSGSGSGDDGTSQRILGTILTWMSERKSDVFLVATANDISALPPELMRKGRMDEIFFVDLPDANIRQ
AIFLIHIQRRQLEPTQFELAQLAKLSQGFSGAEIEQAVISAIYTAKALEREVDQSALLEELMKTRPLSVVMREKLQALRQ
WAEGRTVNAHQ

Sequences:

>Translated_491_residues
MQDIQDLSAVLRSNTPIIVIETYEEYRVIELLRKVSNILYQPLFSWSVTQGLMRVDSGLGRQKFNCEPGDILGQIKSTKE
QGIYVLCDFHPFVEDAPKNVRLLKEIALEYEALKHTIVLVSHEFTIPPEIKHYCAHFRLSLPNTAQLLNLIYEQIDKVRS
EGMMLNVDDEAVAKLAENLRGVTFDDARRLAHKAIVDDGAITHSDIDSINRGKFELLDMQGVLQFEYDTSDFSQVAGLHN
LKQWLSHRTPSAHTQILEDKPKGILLLGVQGSGKSLAAKAVAGMWQRPLLKMDMSALYNKYIGETEKNLRKALELADLMA
PCVLWIDEIEKGLSSGSGSGDDGTSQRILGTILTWMSERKSDVFLVATANDISALPPELMRKGRMDEIFFVDLPDANIRQ
AIFLIHIQRRQLEPTQFELAQLAKLSQGFSGAEIEQAVISAIYTAKALEREVDQSALLEELMKTRPLSVVMREKLQALRQ
WAEGRTVNAHQ
>Mature_491_residues
MQDIQDLSAVLRSNTPIIVIETYEEYRVIELLRKVSNILYQPLFSWSVTQGLMRVDSGLGRQKFNCEPGDILGQIKSTKE
QGIYVLCDFHPFVEDAPKNVRLLKEIALEYEALKHTIVLVSHEFTIPPEIKHYCAHFRLSLPNTAQLLNLIYEQIDKVRS
EGMMLNVDDEAVAKLAENLRGVTFDDARRLAHKAIVDDGAITHSDIDSINRGKFELLDMQGVLQFEYDTSDFSQVAGLHN
LKQWLSHRTPSAHTQILEDKPKGILLLGVQGSGKSLAAKAVAGMWQRPLLKMDMSALYNKYIGETEKNLRKALELADLMA
PCVLWIDEIEKGLSSGSGSGDDGTSQRILGTILTWMSERKSDVFLVATANDISALPPELMRKGRMDEIFFVDLPDANIRQ
AIFLIHIQRRQLEPTQFELAQLAKLSQGFSGAEIEQAVISAIYTAKALEREVDQSALLEELMKTRPLSVVMREKLQALRQ
WAEGRTVNAHQ

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI157671927, Length=263, Percent_Identity=31.1787072243346, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI300192933, Length=283, Percent_Identity=30.0353356890459, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI6005942, Length=291, Percent_Identity=27.8350515463918, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI45643125, Length=251, Percent_Identity=30.2788844621514, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI45643123, Length=251, Percent_Identity=30.2788844621514, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI4506209, Length=209, Percent_Identity=31.5789473684211, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI24430151, Length=220, Percent_Identity=31.8181818181818, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4507173, Length=215, Percent_Identity=33.4883720930233, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI195539395, Length=188, Percent_Identity=32.9787234042553, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI21361144, Length=362, Percent_Identity=24.585635359116, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI24497618, Length=229, Percent_Identity=29.6943231441048, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI153792536, Length=229, Percent_Identity=28.82096069869, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI24497435, Length=200, Percent_Identity=31.5, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI31742536, Length=183, Percent_Identity=31.6939890710383, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI112789543, Length=183, Percent_Identity=31.6939890710383, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI17865802, Length=232, Percent_Identity=29.3103448275862, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI89064750, Length=186, Percent_Identity=30.6451612903226, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI4505725, Length=218, Percent_Identity=26.1467889908257, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI5729991, Length=186, Percent_Identity=30.6451612903226, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI24430155, Length=186, Percent_Identity=30.6451612903226, Blast_Score=83, Evalue=6e-16,
Organism=Homo sapiens, GI7657689, Length=228, Percent_Identity=29.3859649122807, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI5901990, Length=182, Percent_Identity=31.8681318681319, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI21327685, Length=228, Percent_Identity=29.3859649122807, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI194018488, Length=216, Percent_Identity=32.4074074074074, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI14149767, Length=181, Percent_Identity=30.3867403314917, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI62177112, Length=181, Percent_Identity=30.3867403314917, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI226371754, Length=198, Percent_Identity=33.8383838383838, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI7019569, Length=246, Percent_Identity=28.0487804878049, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI310125280, Length=233, Percent_Identity=30.4721030042918, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI156564401, Length=233, Percent_Identity=30.4721030042918, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI310125282, Length=233, Percent_Identity=30.4721030042918, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI11875211, Length=212, Percent_Identity=28.3018867924528, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI40806170, Length=212, Percent_Identity=28.3018867924528, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI229577436, Length=244, Percent_Identity=25, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI31377644, Length=179, Percent_Identity=27.9329608938547, Blast_Score=73, Evalue=8e-13,
Organism=Escherichia coli, GI1789568, Length=234, Percent_Identity=32.0512820512821, Blast_Score=112, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17532375, Length=279, Percent_Identity=29.3906810035842, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17508053, Length=309, Percent_Identity=28.4789644012945, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17531535, Length=280, Percent_Identity=28.9285714285714, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI71987364, Length=195, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71987372, Length=195, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17563250, Length=253, Percent_Identity=30.0395256916996, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI133931034, Length=225, Percent_Identity=29.3333333333333, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI193206114, Length=225, Percent_Identity=29.3333333333333, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI193206116, Length=225, Percent_Identity=29.3333333333333, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17563248, Length=220, Percent_Identity=29.0909090909091, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17537217, Length=182, Percent_Identity=35.1648351648352, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17554786, Length=200, Percent_Identity=31.5, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17508701, Length=324, Percent_Identity=25.9259259259259, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71994521, Length=274, Percent_Identity=28.1021897810219, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI25153574, Length=229, Percent_Identity=28.3842794759825, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI193209502, Length=229, Percent_Identity=28.3842794759825, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17505546, Length=247, Percent_Identity=29.9595141700405, Blast_Score=89, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17554264, Length=203, Percent_Identity=31.0344827586207, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25144278, Length=200, Percent_Identity=30.5, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI25144281, Length=200, Percent_Identity=30.5, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI115534323, Length=283, Percent_Identity=28.2685512367491, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562804, Length=216, Percent_Identity=31.0185185185185, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI86561515, Length=232, Percent_Identity=28.448275862069, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17554784, Length=213, Percent_Identity=28.169014084507, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32563584, Length=221, Percent_Identity=28.9592760180996, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17508421, Length=271, Percent_Identity=28.0442804428044, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI25146157, Length=254, Percent_Identity=26.7716535433071, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI133901658, Length=200, Percent_Identity=28.5, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17541226, Length=227, Percent_Identity=25.1101321585903, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI133901662, Length=200, Percent_Identity=28.5, Blast_Score=69, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17541224, Length=227, Percent_Identity=25.1101321585903, Blast_Score=69, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6320077, Length=213, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6320854, Length=231, Percent_Identity=32.034632034632, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6324833, Length=231, Percent_Identity=29.8701298701299, Blast_Score=99, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6324000, Length=230, Percent_Identity=30.4347826086957, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6323429, Length=330, Percent_Identity=25.1515151515152, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6320197, Length=223, Percent_Identity=30.0448430493274, Blast_Score=95, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6322704, Length=209, Percent_Identity=30.622009569378, Blast_Score=94, Evalue=4e-20,
Organism=Saccharomyces cerevisiae, GI6324691, Length=310, Percent_Identity=28.3870967741935, Blast_Score=93, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6323736, Length=226, Percent_Identity=30.9734513274336, Blast_Score=91, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6320602, Length=222, Percent_Identity=31.0810810810811, Blast_Score=90, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6321390, Length=201, Percent_Identity=29.8507462686567, Blast_Score=87, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6322994, Length=152, Percent_Identity=30.2631578947368, Blast_Score=87, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6322651, Length=206, Percent_Identity=27.6699029126214, Blast_Score=84, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6321709, Length=244, Percent_Identity=28.2786885245902, Blast_Score=84, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6321465, Length=177, Percent_Identity=27.683615819209, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6325281, Length=232, Percent_Identity=27.5862068965517, Blast_Score=81, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6325431, Length=218, Percent_Identity=28.8990825688073, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6325183, Length=220, Percent_Identity=28.1818181818182, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6320887, Length=196, Percent_Identity=27.0408163265306, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6319554, Length=195, Percent_Identity=27.1794871794872, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24639391, Length=274, Percent_Identity=33.2116788321168, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI161076488, Length=239, Percent_Identity=29.7071129707113, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI17137560, Length=239, Percent_Identity=29.7071129707113, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI161076486, Length=239, Percent_Identity=29.7071129707113, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24652279, Length=197, Percent_Identity=32.994923857868, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI17137738, Length=209, Percent_Identity=31.1004784688995, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24660075, Length=179, Percent_Identity=31.2849162011173, Blast_Score=99, Evalue=9e-21,
Organism=Drosophila melanogaster, GI281365776, Length=179, Percent_Identity=31.2849162011173, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI45552965, Length=179, Percent_Identity=31.2849162011173, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24665814, Length=270, Percent_Identity=28.5185185185185, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24649446, Length=220, Percent_Identity=31.3636363636364, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI28574878, Length=270, Percent_Identity=28.5185185185185, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24640100, Length=207, Percent_Identity=32.8502415458937, Blast_Score=96, Evalue=6e-20,
Organism=Drosophila melanogaster, GI19920408, Length=200, Percent_Identity=32, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281363136, Length=234, Percent_Identity=29.9145299145299, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI78707192, Length=234, Percent_Identity=29.9145299145299, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24663015, Length=208, Percent_Identity=31.25, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI20129529, Length=261, Percent_Identity=29.8850574712644, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI18859657, Length=219, Percent_Identity=33.3333333333333, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI17738151, Length=270, Percent_Identity=26.2962962962963, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI20129423, Length=240, Percent_Identity=27.9166666666667, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355121, Length=235, Percent_Identity=28.0851063829787, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281361487, Length=182, Percent_Identity=30.2197802197802, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24656820, Length=289, Percent_Identity=26.2975778546713, Blast_Score=86, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24656825, Length=289, Percent_Identity=26.2975778546713, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI19921202, Length=199, Percent_Identity=28.643216080402, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI18860063, Length=213, Percent_Identity=28.6384976525822, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24658770, Length=221, Percent_Identity=27.1493212669683, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24651451, Length=224, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24644145, Length=178, Percent_Identity=29.2134831460674, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24581396, Length=226, Percent_Identity=28.7610619469027, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281360136, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24644411, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281360144, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281360140, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI281360146, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281360138, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45554047, Length=184, Percent_Identity=32.0652173913043, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI281360142, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21357333, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28571849, Length=215, Percent_Identity=29.3023255813954, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28571847, Length=215, Percent_Identity=29.3023255813954, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17864540, Length=199, Percent_Identity=28.1407035175879, Blast_Score=69, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 55297; Mature: 55297

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDIQDLSAVLRSNTPIIVIETYEEYRVIELLRKVSNILYQPLFSWSVTQGLMRVDSGLG
CCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RQKFNCEPGDILGQIKSTKEQGIYVLCDFHPFVEDAPKNVRLLKEIALEYEALKHTIVLV
CCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHEEEEE
SHEFTIPPEIKHYCAHFRLSLPNTAQLLNLIYEQIDKVRSEGMMLNVDDEAVAKLAENLR
EECCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHC
GVTFDDARRLAHKAIVDDGAITHSDIDSINRGKFELLDMQGVLQFEYDTSDFSQVAGLHN
CCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHHHH
LKQWLSHRTPSAHTQILEDKPKGILLLGVQGSGKSLAAKAVAGMWQRPLLKMDMSALYNK
HHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YIGETEKNLRKALELADLMAPCVLWIDEIEKGLSSGSGSGDDGTSQRILGTILTWMSERK
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
SDVFLVATANDISALPPELMRKGRMDEIFFVDLPDANIRQAIFLIHIQRRQLEPTQFELA
CCEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHEEEHHHCCCCHHHHHH
QLAKLSQGFSGAEIEQAVISAIYTAKALEREVDQSALLEELMKTRPLSVVMREKLQALRQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
WAEGRTVNAHQ
HHCCCCCCCCC
>Mature Secondary Structure
MQDIQDLSAVLRSNTPIIVIETYEEYRVIELLRKVSNILYQPLFSWSVTQGLMRVDSGLG
CCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RQKFNCEPGDILGQIKSTKEQGIYVLCDFHPFVEDAPKNVRLLKEIALEYEALKHTIVLV
CCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHEEEEE
SHEFTIPPEIKHYCAHFRLSLPNTAQLLNLIYEQIDKVRSEGMMLNVDDEAVAKLAENLR
EECCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHC
GVTFDDARRLAHKAIVDDGAITHSDIDSINRGKFELLDMQGVLQFEYDTSDFSQVAGLHN
CCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECCCCEEEEECCHHHHHHHHHHH
LKQWLSHRTPSAHTQILEDKPKGILLLGVQGSGKSLAAKAVAGMWQRPLLKMDMSALYNK
HHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YIGETEKNLRKALELADLMAPCVLWIDEIEKGLSSGSGSGDDGTSQRILGTILTWMSERK
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC
SDVFLVATANDISALPPELMRKGRMDEIFFVDLPDANIRQAIFLIHIQRRQLEPTQFELA
CCEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCHHHHHHHEEEHHHCCCCHHHHHH
QLAKLSQGFSGAEIEQAVISAIYTAKALEREVDQSALLEELMKTRPLSVVMREKLQALRQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
WAEGRTVNAHQ
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]