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The map label for this gene is recJ [H]

Identifier: 157960635

GI number: 157960635

Start: 1000125

End: 1001849

Strand: Direct

Name: recJ [H]

Synonym: Spea_0807

Alternate gene names: 157960635

Gene position: 1000125-1001849 (Clockwise)

Preceding gene: 157960634

Following gene: 157960637

Centisome position: 19.33

GC content: 51.36

Gene sequence:

>1725_bases
GTGATCCATAAGATAGTTCGCCGCCCAAGAGTCGATGATAGCCACCTGCCCGATACATTTTCGCCGATTTTAAAACAGAT
CTATGCCAGCCGTGGAGTCAGTGCGTCTGACTGCGAGCTGAGTCTAGCTAAGTTACTCAGGCCCAATACTATGGCAGGGC
TTGAGCAGGCTGCCAAGATAGTTGCTGATGCCATTGAGGCACAAGAAGCAATTCTTATTATGGGTGACTTCGATGCCGAT
GGCGCGACCTCGACCAGCGTCTGTGTGTTGGCGCTGCGGATGATGGGCGCACAGAAGGTGGATTACCTTATTCCGAACCG
CTTCGATTACGGTTATGGATTAAGCTCTGAGATTGTTGCGGTTGCGGCGAGTAAAAATGCCGAGCTGTTGATCACCGTCG
ACAACGGAATTTCATCCATTGAAGGCGTTGCCGCGGCAAAGGCCTGTGGCATGACGGTGGTGATCACCGACCACCATCTA
CCGGGTCATACCTTGCCGGACGCCGATGCTATCGTTAACCCAAATCAAGATGGCTGCGGCTTTGCTAGTAAGTCGATTGC
CGGTGTGGGCGTAGCCTTCTATCTGATGTCAGCGCTTAGAGCCGAGCTTCGAAGCCGCAACTGGTATCAACTGCAAAACA
TAGCCGAGCCTAATCTTGCTCAACTACTGGATATTGTTGCCCTAGGCACAGTTGCCGATGTGGTGTCGCTAGACACCAAT
AACCGTATCTTAGTGGAAGCGGGTTTACAGCGAGTTAAAGCGGGACGTTGCCGTGTTGGTATTACCGCCCTATTGGAAAT
CGCTAAACGTACACCGTCACGCATCGTTGCTTCAGACTTTGGTTTTGCAGTGGGCCCAAGGCTTAACGCCGCAGGTCGTC
TCGATGAGATGGCGTTAGGGGTGGAAACCTTATTGTGTGACGATATCATGCTAGCAAGGCGCATGGCATCAGAGCTCGAT
GGTCTAAACGCTGAGCGACGCGACCTTGAAGCCGATATGCAGCAAGAAGCGCTCAAGAGTCTTGAGAGTATCGAGCTCAA
CGAAGCCGAATTGCCGTGGGGAATTGCAATTTTCCAAGCCGACTGGCATCAAGGTGTGATTGGGATCTTGGCTTCGCGGA
TTAAAGACAAGTATCACCGTCCTGTAATCGCCTTTGCCGAAGCGGGTGAGGGCGAAATTAAAGGTTCGGCGCGCTCGATT
AAAGGTTTGCATATGCGTGACCTATTAGAGCTTATCAACACCCGACACCCTGGGCTTATTTTAAAATTTGGTGGCCACGC
TATGGCGGCGGGGTTATCTATTCAAGCGGGGCAATTTGCCCAGTTTGCCGATGCCTACGATAAAGCCGTACGTGAAGTGC
TAGCGCCTGAATTACTGACGGGCGAGCTAGTCTCTGATGGTGAGTTGGTACCCGAGCAGTTCAAGCTTGAGCTTGCCAGT
GAGCTTAGAGCCGCAGGCCCATGGGGCCAGTCATTCACTGAACCCTTATTTGATGGTTACTTTAGGGTGATTCAGCAGCG
CATCGTTGGTGAAAAGCACTTAAAATTGATTCTGGAAACGGAGTGCGGCCGAGTGATGCTCGATGCCATCGCTTTTAATG
TGGATTTGAAGACCTGGCCCGATGCCACGATTCAGTATGCACAGGTGGTGTATAAACTCGATGTGAATGAGTTTAGAGGC
AACGAGAGCTTGCAGCTGATGGTTGAGCAGATTGAGCCTAAATAA

Upstream 100 bases:

>100_bases
ATCGCTAAAAAGGTGAGCCTAGGCTCACCTTTTTTGTGCCCCTTTTCTAGCAGTCTTTGTTATGCTGCTACTGTTTTTAG
TTTTAAGGGTTTAATCCAAC

Downstream 100 bases:

>100_bases
GCCTATAGTGGAATGACACCAAGGAAGAGGGATGCACTAGTTGCATCCCTTTTTGTTTTCAGCCCTAAACCACCTACTTC
AGTAGGTGGTTATCATCAAT

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MIHKIVRRPRVDDSHLPDTFSPILKQIYASRGVSASDCELSLAKLLRPNTMAGLEQAAKIVADAIEAQEAILIMGDFDAD
GATSTSVCVLALRMMGAQKVDYLIPNRFDYGYGLSSEIVAVAASKNAELLITVDNGISSIEGVAAAKACGMTVVITDHHL
PGHTLPDADAIVNPNQDGCGFASKSIAGVGVAFYLMSALRAELRSRNWYQLQNIAEPNLAQLLDIVALGTVADVVSLDTN
NRILVEAGLQRVKAGRCRVGITALLEIAKRTPSRIVASDFGFAVGPRLNAAGRLDEMALGVETLLCDDIMLARRMASELD
GLNAERRDLEADMQQEALKSLESIELNEAELPWGIAIFQADWHQGVIGILASRIKDKYHRPVIAFAEAGEGEIKGSARSI
KGLHMRDLLELINTRHPGLILKFGGHAMAAGLSIQAGQFAQFADAYDKAVREVLAPELLTGELVSDGELVPEQFKLELAS
ELRAAGPWGQSFTEPLFDGYFRVIQQRIVGEKHLKLILETECGRVMLDAIAFNVDLKTWPDATIQYAQVVYKLDVNEFRG
NESLQLMVEQIEPK

Sequences:

>Translated_574_residues
MIHKIVRRPRVDDSHLPDTFSPILKQIYASRGVSASDCELSLAKLLRPNTMAGLEQAAKIVADAIEAQEAILIMGDFDAD
GATSTSVCVLALRMMGAQKVDYLIPNRFDYGYGLSSEIVAVAASKNAELLITVDNGISSIEGVAAAKACGMTVVITDHHL
PGHTLPDADAIVNPNQDGCGFASKSIAGVGVAFYLMSALRAELRSRNWYQLQNIAEPNLAQLLDIVALGTVADVVSLDTN
NRILVEAGLQRVKAGRCRVGITALLEIAKRTPSRIVASDFGFAVGPRLNAAGRLDEMALGVETLLCDDIMLARRMASELD
GLNAERRDLEADMQQEALKSLESIELNEAELPWGIAIFQADWHQGVIGILASRIKDKYHRPVIAFAEAGEGEIKGSARSI
KGLHMRDLLELINTRHPGLILKFGGHAMAAGLSIQAGQFAQFADAYDKAVREVLAPELLTGELVSDGELVPEQFKLELAS
ELRAAGPWGQSFTEPLFDGYFRVIQQRIVGEKHLKLILETECGRVMLDAIAFNVDLKTWPDATIQYAQVVYKLDVNEFRG
NESLQLMVEQIEPK
>Mature_574_residues
MIHKIVRRPRVDDSHLPDTFSPILKQIYASRGVSASDCELSLAKLLRPNTMAGLEQAAKIVADAIEAQEAILIMGDFDAD
GATSTSVCVLALRMMGAQKVDYLIPNRFDYGYGLSSEIVAVAASKNAELLITVDNGISSIEGVAAAKACGMTVVITDHHL
PGHTLPDADAIVNPNQDGCGFASKSIAGVGVAFYLMSALRAELRSRNWYQLQNIAEPNLAQLLDIVALGTVADVVSLDTN
NRILVEAGLQRVKAGRCRVGITALLEIAKRTPSRIVASDFGFAVGPRLNAAGRLDEMALGVETLLCDDIMLARRMASELD
GLNAERRDLEADMQQEALKSLESIELNEAELPWGIAIFQADWHQGVIGILASRIKDKYHRPVIAFAEAGEGEIKGSARSI
KGLHMRDLLELINTRHPGLILKFGGHAMAAGLSIQAGQFAQFADAYDKAVREVLAPELLTGELVSDGELVPEQFKLELAS
ELRAAGPWGQSFTEPLFDGYFRVIQQRIVGEKHLKLILETECGRVMLDAIAFNVDLKTWPDATIQYAQVVYKLDVNEFRG
NESLQLMVEQIEPK

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=570, Percent_Identity=56.4912280701754, Blast_Score=665, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62438; Mature: 62438

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHKIVRRPRVDDSHLPDTFSPILKQIYASRGVSASDCELSLAKLLRPNTMAGLEQAAKI
CCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
VADAIEAQEAILIMGDFDADGATSTSVCVLALRMMGAQKVDYLIPNRFDYGYGLSSEIVA
HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEE
VAASKNAELLITVDNGISSIEGVAAAKACGMTVVITDHHLPGHTLPDADAIVNPNQDGCG
EEECCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECCCCCCCC
FASKSIAGVGVAFYLMSALRAELRSRNWYQLQNIAEPNLAQLLDIVALGTVADVVSLDTN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVEAGLQRVKAGRCRVGITALLEIAKRTPSRIVASDFGFAVGPRLNAAGRLDEMALG
CEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHH
VETLLCDDIMLARRMASELDGLNAERRDLEADMQQEALKSLESIELNEAELPWGIAIFQA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
DWHQGVIGILASRIKDKYHRPVIAFAEAGEGEIKGSARSIKGLHMRDLLELINTRHPGLI
CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCEE
LKFGGHAMAAGLSIQAGQFAQFADAYDKAVREVLAPELLTGELVSDGELVPEQFKLELAS
EEECCCCHHCCCEECCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHH
ELRAAGPWGQSFTEPLFDGYFRVIQQRIVGEKHLKLILETECGRVMLDAIAFNVDLKTWP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCHHEEEHHHEECCCCCCC
DATIQYAQVVYKLDVNEFRGNESLQLMVEQIEPK
CHHHHHHHHHHEECHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIHKIVRRPRVDDSHLPDTFSPILKQIYASRGVSASDCELSLAKLLRPNTMAGLEQAAKI
CCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH
VADAIEAQEAILIMGDFDADGATSTSVCVLALRMMGAQKVDYLIPNRFDYGYGLSSEIVA
HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEE
VAASKNAELLITVDNGISSIEGVAAAKACGMTVVITDHHLPGHTLPDADAIVNPNQDGCG
EEECCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEECCCCCCCC
FASKSIAGVGVAFYLMSALRAELRSRNWYQLQNIAEPNLAQLLDIVALGTVADVVSLDTN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCC
NRILVEAGLQRVKAGRCRVGITALLEIAKRTPSRIVASDFGFAVGPRLNAAGRLDEMALG
CEEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHH
VETLLCDDIMLARRMASELDGLNAERRDLEADMQQEALKSLESIELNEAELPWGIAIFQA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
DWHQGVIGILASRIKDKYHRPVIAFAEAGEGEIKGSARSIKGLHMRDLLELINTRHPGLI
CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCEE
LKFGGHAMAAGLSIQAGQFAQFADAYDKAVREVLAPELLTGELVSDGELVPEQFKLELAS
EEECCCCHHCCCEECCCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHH
ELRAAGPWGQSFTEPLFDGYFRVIQQRIVGEKHLKLILETECGRVMLDAIAFNVDLKTWP
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCHHEEEHHHEECCCCCCC
DATIQYAQVVYKLDVNEFRGNESLQLMVEQIEPK
CHHHHHHHHHHEECHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]