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The map label for this gene is ydiY [H]

Identifier: 157960620

GI number: 157960620

Start: 980408

End: 981148

Strand: Direct

Name: ydiY [H]

Synonym: Spea_0792

Alternate gene names: 157960620

Gene position: 980408-981148 (Clockwise)

Preceding gene: 157960619

Following gene: 157960621

Centisome position: 18.95

GC content: 44.53

Gene sequence:

>741_bases
ATGAAAAAAATGCTTACGGCTATGGCTGTGGTAATGGCGGCTCCTTTTGCTGCGCAAGCAGGGGCTGACTTTGTTGAAGG
CGATAAGACCTTTGCTGGTGAAGCCGAGCTCGGTGCGACATTAACCACAGGTAACACTGAAACCTCGTCGGTGAAAGGTC
GTCTAAACATGTTGCAAGAGCTAGGTAATTGGGAAAACCAGTACCTGTTTGAAGGCTTGTATAAAGAAGACACTGGAGAG
GTTACTGCTAAGCGTTACTACGGCGGTATTCAAGGTGATTACAAGTTCGATGACAAGAACTACATGTATATCACCGGCAA
CTATGAAGTCGATCCATTTACTGGTTATGACTATAAGGCCGTTGCTTCAGCCGGTTATGGTCACAAGTTTATTGACAGCG
GTAACATGTTCCTAAGTGCTGAGATTGGTCCTGGTTATATCTACAAGAAGTTAGATGATGAGCAGACTGCAATACTCGGT
TATGATAACGAAGATAGCGTTGTCGCTCACGGCGCGATGAACTTCACCTATGAGTTCAGTGAAACTTCCAAGTTTACTCA
ACTGTTTGTTGCTGACTATGGTGATAGCTTAGAAGGTCGTTCTGAGTCGGCAATTACGGCTAATATCGTCGGCGCACTCG
CCATGAAATTTGCAGTTATTGTTCGTTACAATGACAGCCCATTAGATGACAAAGAGAGCACAGATACAGAGACAAACATG
ACTCTGTTATACGCCTTCTAA

Upstream 100 bases:

>100_bases
ATTGCTAATGCCCTTAGCCTAGTTGCATTTCAATTGTTAGTACAAAGTGTTAATATTGCGCCGATTTTTAGGGAGTTTGG
TAAACGGAGTACTAAATATT

Downstream 100 bases:

>100_bases
ATAGATTGACAGCGAAGATATCGACGTAGCCGATATTTGTCTGTTGCGCTAATGAGTGTAAACTTTTGTCAATAAAAGGC
ACCCAATGGGTGTCTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKKMLTAMAVVMAAPFAAQAGADFVEGDKTFAGEAELGATLTTGNTETSSVKGRLNMLQELGNWENQYLFEGLYKEDTGE
VTAKRYYGGIQGDYKFDDKNYMYITGNYEVDPFTGYDYKAVASAGYGHKFIDSGNMFLSAEIGPGYIYKKLDDEQTAILG
YDNEDSVVAHGAMNFTYEFSETSKFTQLFVADYGDSLEGRSESAITANIVGALAMKFAVIVRYNDSPLDDKESTDTETNM
TLLYAF

Sequences:

>Translated_246_residues
MKKMLTAMAVVMAAPFAAQAGADFVEGDKTFAGEAELGATLTTGNTETSSVKGRLNMLQELGNWENQYLFEGLYKEDTGE
VTAKRYYGGIQGDYKFDDKNYMYITGNYEVDPFTGYDYKAVASAGYGHKFIDSGNMFLSAEIGPGYIYKKLDDEQTAILG
YDNEDSVVAHGAMNFTYEFSETSKFTQLFVADYGDSLEGRSESAITANIVGALAMKFAVIVRYNDSPLDDKESTDTETNM
TLLYAF
>Mature_246_residues
MKKMLTAMAVVMAAPFAAQAGADFVEGDKTFAGEAELGATLTTGNTETSSVKGRLNMLQELGNWENQYLFEGLYKEDTGE
VTAKRYYGGIQGDYKFDDKNYMYITGNYEVDPFTGYDYKAVASAGYGHKFIDSGNMFLSAEIGPGYIYKKLDDEQTAILG
YDNEDSVVAHGAMNFTYEFSETSKFTQLFVADYGDSLEGRSESAITANIVGALAMKFAVIVRYNDSPLDDKESTDTETNM
TLLYAF

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=265, Percent_Identity=26.7924528301887, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 27104; Mature: 27104

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMLTAMAVVMAAPFAAQAGADFVEGDKTFAGEAELGATLTTGNTETSSVKGRLNMLQE
CHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH
LGNWENQYLFEGLYKEDTGEVTAKRYYGGIQGDYKFDDKNYMYITGNYEVDPFTGYDYKA
HCCCCHHHHHHHHCCCCCCCEEEHHHCCCCCCCEEECCCCEEEEECCEEECCCCCCCCHH
VASAGYGHKFIDSGNMFLSAEIGPGYIYKKLDDEQTAILGYDNEDSVVAHGAMNFTYEFS
HHCCCCCCEEEECCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEECEEEEEEEEC
ETSKFTQLFVADYGDSLEGRSESAITANIVGALAMKFAVIVRYNDSPLDDKESTDTETNM
CCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCE
TLLYAF
EEEEEC
>Mature Secondary Structure
MKKMLTAMAVVMAAPFAAQAGADFVEGDKTFAGEAELGATLTTGNTETSSVKGRLNMLQE
CHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHH
LGNWENQYLFEGLYKEDTGEVTAKRYYGGIQGDYKFDDKNYMYITGNYEVDPFTGYDYKA
HCCCCHHHHHHHHCCCCCCCEEEHHHCCCCCCCEEECCCCEEEEECCEEECCCCCCCCHH
VASAGYGHKFIDSGNMFLSAEIGPGYIYKKLDDEQTAILGYDNEDSVVAHGAMNFTYEFS
HHCCCCCCEEEECCCEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEECEEEEEEEEC
ETSKFTQLFVADYGDSLEGRSESAITANIVGALAMKFAVIVRYNDSPLDDKESTDTETNM
CCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCE
TLLYAF
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]