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The map label for this gene is ydcP [H]

Identifier: 157960592

GI number: 157960592

Start: 948489

End: 950438

Strand: Direct

Name: ydcP [H]

Synonym: Spea_0764

Alternate gene names: 157960592

Gene position: 948489-950438 (Clockwise)

Preceding gene: 157960591

Following gene: 157960593

Centisome position: 18.33

GC content: 47.9

Gene sequence:

>1950_bases
ATGAGCAATGTTGGCATCTATACTCCTAGCGATAAGCCCGAAGAGACGCTTAAAGACGAGTCGCACTCTCCTGTAGAGCT
GCAAAATAACCGTCTAGAGCTATTGGCTCCGGCTAAAAATGCCGACTTCGGTATTGAAGCTATCCGCCATGGTGCCGATG
CCGTGTATATTGGTGGTCCCGCCTTCGGTGCCCGTGCCACAGCCGGTAACAGCGTCGAAGATATCGCGCGCCTATGTAGC
TTTGCTCATCAATATCACGCCCAAGTGTTTGTTGCTATCAATACCATTTTGATGGATGACGAACTGCAAGCGGCGCAAAA
ACTTATCTGGGAAGTGTACGAGGCGGGCGCCGATGCGCTTATCGTGCAAGATATGGGCATACTGCAGCTAGATTTGCCTC
CTATCGCCTTACATGCCAGCACACAGATGGATAACCGTAGCCCAGAGAAAGTCGCCTTCTTAGAGCAGGTAGGTTTCTCG
CAGGTGGTACTGGCTCGTGAACTTGGTTTAAGCCAAATTCGTGACGTTGCGGCTAACACCAATATGCAGATTGAGTTCTT
TATTCACGGCGCACTGTGTGTCGCGTTCAGTGGCCTGTGCAACTTGAGCCACTCATTCAGTAATCGTAGCGCCAACCGCG
GTGAATGCTCGCAGCTGTGTCGTTTACCTGCCGATTTAAAGACGCGACAGGGAGAAGTACTGGCGCAAAACGAGCACCTA
TTATCCCTTAAAGATAATAACCAGACAGACAACTTAGAAGCCTTGATCGACGCGGGCGTACGCTCGTTTAAAATCGAGGG
ACGTCTAAAAGATTTAAGCTATGTTAAAAACGTCACCGCCCATTACCGCCAAGAGTTAGACAAGATCATCGCTCGTCGCA
GTGAATTTGTCGCTTCATCCCATGGTCGCTGTGAGCATACTTTTACGCCTGATCCTGAAAAGACCTTTAACCGCGGCAAG
ACAGATTACTTTGTCCATGAACGCAGCCAAGGTATGAATGACTTCCGCTCGCCAAAATATATTGGTGAAGAGGTCGCAAC
AGTTAAGCGCATAGGTAATGACTATATTGAAGTGACTTCGAATGAGACCTTCAACAATGGTGACGGCTTGTGTTTCTTCC
CAAGTGATTACGCTGAAGCTAAGCAGTCCGATGACAAGCTAAAAGGCCTGCGTGTTAATCGCGCTGAAGGTTTAAAGCTA
TTTGTGCTGCGTATGCCTAAAGAGCTTAAAGTGGGCATGACGATTTATCGTAACCATAACCAAGCCTTTGAGACCGTGTT
GGCGAAAGAGTCAGCTAAGCGCATTATCGGCGTAGACCTAGTATTAGCCGATACCGATGACGGTGTATCGCTTACCATGA
CTGACGTTTATGGCCACACTGCGACTCAGTCGTTGATTGTTGAGAAAACTGCAGCCACCGATATTGAAAAAGCGCAGCAA
GGCCTGCGTAAACAGCTGGCAAAGCTAGGTAGTACCGACTTTACCGCCCATAACATCAGCATAGAAACCGCTGAGACCTG
GTTTATTCCAACCTCAATGTTAAACGGTCTACGCCGTGACACTGTTGCGGCACTAGAGCAGGCCAGAGTCGAAGGTTATC
AGCGCCCTAAGGCGTGGAAGTACAACCAAGATGCCGTCTATCCGGTTAAGCACTTAAGCTATTTAGGCAACGTGGCCAAC
GAACAAGCCAAGGCTTTTTATCAGCGTCATGGGGTGATTGAAATTCAAGATACCTATGAGAAGAACGGGATCAATGAAGA
TGTGCCGCTGATGGTAACTAAGCATTGTTTACGCTTTAACTTTAATCTTTGTCCTAAAGAGGTGCCGGGTATTAAAGCCG
ATCCTATGGTGCTGGAAATTGGTAAAGATGTATTAAAGCTAGTGTTCGACTGTCCGAAATGTGAAATGATGGTTGTCGGT
GAAAACAGACAGGTTCGCACTACTGATTAG

Upstream 100 bases:

>100_bases
TTGCTTAAAAATTGATTTATATTAGCTAACGCCAAAGCGGGGCAATTTTGCTATAATCTTCGCCCAAAATATTTGTGTTA
ACCCTTTTTGAGTGATTTTT

Downstream 100 bases:

>100_bases
GCTTGCTACATATCAGTGAGCTAATTAAACAAGCTAATTCAAACTAGCTCTCTCAAACTATTAAGGAATATAGACGATGG
GATTATTAGATTCGCTGATG

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 649; Mature: 648

Protein sequence:

>649_residues
MSNVGIYTPSDKPEETLKDESHSPVELQNNRLELLAPAKNADFGIEAIRHGADAVYIGGPAFGARATAGNSVEDIARLCS
FAHQYHAQVFVAINTILMDDELQAAQKLIWEVYEAGADALIVQDMGILQLDLPPIALHASTQMDNRSPEKVAFLEQVGFS
QVVLARELGLSQIRDVAANTNMQIEFFIHGALCVAFSGLCNLSHSFSNRSANRGECSQLCRLPADLKTRQGEVLAQNEHL
LSLKDNNQTDNLEALIDAGVRSFKIEGRLKDLSYVKNVTAHYRQELDKIIARRSEFVASSHGRCEHTFTPDPEKTFNRGK
TDYFVHERSQGMNDFRSPKYIGEEVATVKRIGNDYIEVTSNETFNNGDGLCFFPSDYAEAKQSDDKLKGLRVNRAEGLKL
FVLRMPKELKVGMTIYRNHNQAFETVLAKESAKRIIGVDLVLADTDDGVSLTMTDVYGHTATQSLIVEKTAATDIEKAQQ
GLRKQLAKLGSTDFTAHNISIETAETWFIPTSMLNGLRRDTVAALEQARVEGYQRPKAWKYNQDAVYPVKHLSYLGNVAN
EQAKAFYQRHGVIEIQDTYEKNGINEDVPLMVTKHCLRFNFNLCPKEVPGIKADPMVLEIGKDVLKLVFDCPKCEMMVVG
ENRQVRTTD

Sequences:

>Translated_649_residues
MSNVGIYTPSDKPEETLKDESHSPVELQNNRLELLAPAKNADFGIEAIRHGADAVYIGGPAFGARATAGNSVEDIARLCS
FAHQYHAQVFVAINTILMDDELQAAQKLIWEVYEAGADALIVQDMGILQLDLPPIALHASTQMDNRSPEKVAFLEQVGFS
QVVLARELGLSQIRDVAANTNMQIEFFIHGALCVAFSGLCNLSHSFSNRSANRGECSQLCRLPADLKTRQGEVLAQNEHL
LSLKDNNQTDNLEALIDAGVRSFKIEGRLKDLSYVKNVTAHYRQELDKIIARRSEFVASSHGRCEHTFTPDPEKTFNRGK
TDYFVHERSQGMNDFRSPKYIGEEVATVKRIGNDYIEVTSNETFNNGDGLCFFPSDYAEAKQSDDKLKGLRVNRAEGLKL
FVLRMPKELKVGMTIYRNHNQAFETVLAKESAKRIIGVDLVLADTDDGVSLTMTDVYGHTATQSLIVEKTAATDIEKAQQ
GLRKQLAKLGSTDFTAHNISIETAETWFIPTSMLNGLRRDTVAALEQARVEGYQRPKAWKYNQDAVYPVKHLSYLGNVAN
EQAKAFYQRHGVIEIQDTYEKNGINEDVPLMVTKHCLRFNFNLCPKEVPGIKADPMVLEIGKDVLKLVFDCPKCEMMVVG
ENRQVRTTD
>Mature_648_residues
SNVGIYTPSDKPEETLKDESHSPVELQNNRLELLAPAKNADFGIEAIRHGADAVYIGGPAFGARATAGNSVEDIARLCSF
AHQYHAQVFVAINTILMDDELQAAQKLIWEVYEAGADALIVQDMGILQLDLPPIALHASTQMDNRSPEKVAFLEQVGFSQ
VVLARELGLSQIRDVAANTNMQIEFFIHGALCVAFSGLCNLSHSFSNRSANRGECSQLCRLPADLKTRQGEVLAQNEHLL
SLKDNNQTDNLEALIDAGVRSFKIEGRLKDLSYVKNVTAHYRQELDKIIARRSEFVASSHGRCEHTFTPDPEKTFNRGKT
DYFVHERSQGMNDFRSPKYIGEEVATVKRIGNDYIEVTSNETFNNGDGLCFFPSDYAEAKQSDDKLKGLRVNRAEGLKLF
VLRMPKELKVGMTIYRNHNQAFETVLAKESAKRIIGVDLVLADTDDGVSLTMTDVYGHTATQSLIVEKTAATDIEKAQQG
LRKQLAKLGSTDFTAHNISIETAETWFIPTSMLNGLRRDTVAALEQARVEGYQRPKAWKYNQDAVYPVKHLSYLGNVANE
QAKAFYQRHGVIEIQDTYEKNGINEDVPLMVTKHCLRFNFNLCPKEVPGIKADPMVLEIGKDVLKLVFDCPKCEMMVVGE
NRQVRTTD

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI87081910, Length=628, Percent_Identity=49.8407643312102, Blast_Score=594, Evalue=1e-171,
Organism=Escherichia coli, GI1788397, Length=394, Percent_Identity=27.9187817258883, Blast_Score=115, Evalue=7e-27,
Organism=Escherichia coli, GI1789548, Length=306, Percent_Identity=30.718954248366, Blast_Score=113, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020988
- InterPro:   IPR001539 [H]

Pfam domain/function: PF12392 DUF3656; PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 72427; Mature: 72296

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVGIYTPSDKPEETLKDESHSPVELQNNRLELLAPAKNADFGIEAIRHGADAVYIGGP
CCCCCCCCCCCCCHHHHCCCCCCCEEECCCEEEEEECCCCCCCCHHHHHCCCCEEEECCC
AFGARATAGNSVEDIARLCSFAHQYHAQVFVAINTILMDDELQAAQKLIWEVYEAGADAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEHHEECHHHHHHHHHHHHHHHCCCCEE
IVQDMGILQLDLPPIALHASTQMDNRSPEKVAFLEQVGFSQVVLARELGLSQIRDVAANT
EEECCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHCHHHHHHHHCCC
NMQIEFFIHGALCVAFSGLCNLSHSFSNRSANRGECSQLCRLPADLKTRQGEVLAQNEHL
CCEEEEEEHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHCCCCHHCCCCCCEEECCCEE
LSLKDNNQTDNLEALIDAGVRSFKIEGRLKDLSYVKNVTAHYRQELDKIIARRSEFVASS
EEECCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HGRCEHTFTPDPEKTFNRGKTDYFVHERSQGMNDFRSPKYIGEEVATVKRIGNDYIEVTS
CCCCCCCCCCCCHHHHCCCCCEEEEECHHCCCCHHCCCHHHHHHHHHHHHHCCCEEEEEC
NETFNNGDGLCFFPSDYAEAKQSDDKLKGLRVNRAEGLKLFVLRMPKELKVGMTIYRNHN
CCCCCCCCEEEECCCHHHHHHCCCHHHCCEEEECCCCCEEEEEECCCHHHCCEEEEECCH
QAFETVLAKESAKRIIGVDLVLADTDDGVSLTMTDVYGHTATQSLIVEKTAATDIEKAQQ
HHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHEEHHHHHHHHHHHH
GLRKQLAKLGSTDFTAHNISIETAETWFIPTSMLNGLRRDTVAALEQARVEGYQRPKAWK
HHHHHHHHCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YNQDAVYPVKHLSYLGNVANEQAKAFYQRHGVIEIQDTYEKNGINEDVPLMVTKHCLRFN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCCHHHHHHHHHCC
FNLCPKEVPGIKADPMVLEIGKDVLKLVFDCPKCEMMVVGENRQVRTTD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCC
>Mature Secondary Structure 
SNVGIYTPSDKPEETLKDESHSPVELQNNRLELLAPAKNADFGIEAIRHGADAVYIGGP
CCCCCCCCCCCCHHHHCCCCCCCEEECCCEEEEEECCCCCCCCHHHHHCCCCEEEECCC
AFGARATAGNSVEDIARLCSFAHQYHAQVFVAINTILMDDELQAAQKLIWEVYEAGADAL
CCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEEHHEECHHHHHHHHHHHHHHHCCCCEE
IVQDMGILQLDLPPIALHASTQMDNRSPEKVAFLEQVGFSQVVLARELGLSQIRDVAANT
EEECCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHHHHHHHCHHHHHHHHCCC
NMQIEFFIHGALCVAFSGLCNLSHSFSNRSANRGECSQLCRLPADLKTRQGEVLAQNEHL
CCEEEEEEHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHCCCCHHCCCCCCEEECCCEE
LSLKDNNQTDNLEALIDAGVRSFKIEGRLKDLSYVKNVTAHYRQELDKIIARRSEFVASS
EEECCCCCCCHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HGRCEHTFTPDPEKTFNRGKTDYFVHERSQGMNDFRSPKYIGEEVATVKRIGNDYIEVTS
CCCCCCCCCCCCHHHHCCCCCEEEEECHHCCCCHHCCCHHHHHHHHHHHHHCCCEEEEEC
NETFNNGDGLCFFPSDYAEAKQSDDKLKGLRVNRAEGLKLFVLRMPKELKVGMTIYRNHN
CCCCCCCCEEEECCCHHHHHHCCCHHHCCEEEECCCCCEEEEEECCCHHHCCEEEEECCH
QAFETVLAKESAKRIIGVDLVLADTDDGVSLTMTDVYGHTATQSLIVEKTAATDIEKAQQ
HHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHEEHHHHHHHHHHHH
GLRKQLAKLGSTDFTAHNISIETAETWFIPTSMLNGLRRDTVAALEQARVEGYQRPKAWK
HHHHHHHHCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YNQDAVYPVKHLSYLGNVANEQAKAFYQRHGVIEIQDTYEKNGINEDVPLMVTKHCLRFN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCCHHHHHHHHHCC
FNLCPKEVPGIKADPMVLEIGKDVLKLVFDCPKCEMMVVGENRQVRTTD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]