| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960591
Identifier: 157960591
GI number: 157960591
Start: 948023
End: 948340
Strand: Direct
Name: 157960591
Synonym: Spea_0763
Alternate gene names: NA
Gene position: 948023-948340 (Clockwise)
Preceding gene: 157960590
Following gene: 157960592
Centisome position: 18.32
GC content: 45.6
Gene sequence:
>318_bases ATGGAAAAGCACAATATCTTTAAGGCACTGCCACAAGACTTAAGCCAAGAGGTTTTTGAGCCATTAGTTAAAACCGATAA TGTGTTGGTAGAGAGGATTATCTCTAAAGCCCATGTGACGCCTCAAGGGGAGTGGTACGATCAACCGCGTAGCGAGTGGG TGATGCTGATGCAGGGCGCCGCCAAGCTTGAGTTTATTGATGGTGAAGTGGTTGAACTTAATGTGGGCGAACATCTAAAT ATCGCAGCTCATGTTAAACATAGAGTGGCGTGGACGTGCGAAGAGGTTGAGACTATCTGGTTAGCAGTTCACTATTAA
Upstream 100 bases:
>100_bases CACAGTGCCAGAACATGCATTGCAGAAAAAGTCGCTGCAAGAGATCTGCTCCTTTTTGTAATAAGTGTACTAAAGGCCAA GTAAGGACAACGAAATAGCG
Downstream 100 bases:
>100_bases TCGATTTTTCTAATCACTTTTGCCTCATGGCTTTTGTCATCGAAAAAGTTGCTTAAAAATTGATTTATATTAGCTAACGC CAAAGCGGGGCAATTTTGCT
Product: cupin family protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Phosphoribosylaminoimidazole Carboxylase ATPase Subunit; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Family Protein; Cupin 2 Barrel; Mannose-6-Phosphate Isomerase; Cupin 2 Barrel-Containing Protein; Lipid A 3-O-Deacylase
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MEKHNIFKALPQDLSQEVFEPLVKTDNVLVERIISKAHVTPQGEWYDQPRSEWVMLMQGAAKLEFIDGEVVELNVGEHLN IAAHVKHRVAWTCEEVETIWLAVHY
Sequences:
>Translated_105_residues MEKHNIFKALPQDLSQEVFEPLVKTDNVLVERIISKAHVTPQGEWYDQPRSEWVMLMQGAAKLEFIDGEVVELNVGEHLN IAAHVKHRVAWTCEEVETIWLAVHY >Mature_105_residues MEKHNIFKALPQDLSQEVFEPLVKTDNVLVERIISKAHVTPQGEWYDQPRSEWVMLMQGAAKLEFIDGEVVELNVGEHLN IAAHVKHRVAWTCEEVETIWLAVHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12161; Mature: 12161
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKHNIFKALPQDLSQEVFEPLVKTDNVLVERIISKAHVTPQGEWYDQPRSEWVMLMQGA CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC AKLEFIDGEVVELNVGEHLNIAAHVKHRVAWTCEEVETIWLAVHY CEEEEECCEEEEEECCCCCCHHHHHHHHHHCCHHHHEEEEEEEEC >Mature Secondary Structure MEKHNIFKALPQDLSQEVFEPLVKTDNVLVERIISKAHVTPQGEWYDQPRSEWVMLMQGA CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC AKLEFIDGEVVELNVGEHLNIAAHVKHRVAWTCEEVETIWLAVHY CEEEEECCEEEEEECCCCCCHHHHHHHHHHCCHHHHEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA