Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960591

Identifier: 157960591

GI number: 157960591

Start: 948023

End: 948340

Strand: Direct

Name: 157960591

Synonym: Spea_0763

Alternate gene names: NA

Gene position: 948023-948340 (Clockwise)

Preceding gene: 157960590

Following gene: 157960592

Centisome position: 18.32

GC content: 45.6

Gene sequence:

>318_bases
ATGGAAAAGCACAATATCTTTAAGGCACTGCCACAAGACTTAAGCCAAGAGGTTTTTGAGCCATTAGTTAAAACCGATAA
TGTGTTGGTAGAGAGGATTATCTCTAAAGCCCATGTGACGCCTCAAGGGGAGTGGTACGATCAACCGCGTAGCGAGTGGG
TGATGCTGATGCAGGGCGCCGCCAAGCTTGAGTTTATTGATGGTGAAGTGGTTGAACTTAATGTGGGCGAACATCTAAAT
ATCGCAGCTCATGTTAAACATAGAGTGGCGTGGACGTGCGAAGAGGTTGAGACTATCTGGTTAGCAGTTCACTATTAA

Upstream 100 bases:

>100_bases
CACAGTGCCAGAACATGCATTGCAGAAAAAGTCGCTGCAAGAGATCTGCTCCTTTTTGTAATAAGTGTACTAAAGGCCAA
GTAAGGACAACGAAATAGCG

Downstream 100 bases:

>100_bases
TCGATTTTTCTAATCACTTTTGCCTCATGGCTTTTGTCATCGAAAAAGTTGCTTAAAAATTGATTTATATTAGCTAACGC
CAAAGCGGGGCAATTTTGCT

Product: cupin family protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Phosphoribosylaminoimidazole Carboxylase ATPase Subunit; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Family Protein; Cupin 2 Barrel; Mannose-6-Phosphate Isomerase; Cupin 2 Barrel-Containing Protein; Lipid A 3-O-Deacylase

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MEKHNIFKALPQDLSQEVFEPLVKTDNVLVERIISKAHVTPQGEWYDQPRSEWVMLMQGAAKLEFIDGEVVELNVGEHLN
IAAHVKHRVAWTCEEVETIWLAVHY

Sequences:

>Translated_105_residues
MEKHNIFKALPQDLSQEVFEPLVKTDNVLVERIISKAHVTPQGEWYDQPRSEWVMLMQGAAKLEFIDGEVVELNVGEHLN
IAAHVKHRVAWTCEEVETIWLAVHY
>Mature_105_residues
MEKHNIFKALPQDLSQEVFEPLVKTDNVLVERIISKAHVTPQGEWYDQPRSEWVMLMQGAAKLEFIDGEVVELNVGEHLN
IAAHVKHRVAWTCEEVETIWLAVHY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12161; Mature: 12161

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKHNIFKALPQDLSQEVFEPLVKTDNVLVERIISKAHVTPQGEWYDQPRSEWVMLMQGA
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
AKLEFIDGEVVELNVGEHLNIAAHVKHRVAWTCEEVETIWLAVHY
CEEEEECCEEEEEECCCCCCHHHHHHHHHHCCHHHHEEEEEEEEC
>Mature Secondary Structure
MEKHNIFKALPQDLSQEVFEPLVKTDNVLVERIISKAHVTPQGEWYDQPRSEWVMLMQGA
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCC
AKLEFIDGEVVELNVGEHLNIAAHVKHRVAWTCEEVETIWLAVHY
CEEEEECCEEEEEECCCCCCHHHHHHHHHHCCHHHHEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA