Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960500

Identifier: 157960500

GI number: 157960500

Start: 832557

End: 834212

Strand: Direct

Name: 157960500

Synonym: Spea_0672

Alternate gene names: NA

Gene position: 832557-834212 (Clockwise)

Preceding gene: 157960499

Following gene: 157960501

Centisome position: 16.09

GC content: 50.97

Gene sequence:

>1656_bases
ATGGAACAGCTGATGACAACTGAACGAAATAAAAAAAACAGCTCGCTTAAGGGGATCGCCTTGCATGGGGTCTTGCTGGG
TGTAGTGAGTTTAACTGCTTGTGGCGGCTCAGGTGATGAGGAAACGCCAAAGCCTGAAGAGAAAATTTACCCAGCCTATA
CCGACATCAAGGCCTCTGGTGGTGACACCACTACCTTCGATGCATCTGAGTCTGGTCACGGTTTTTCAACCCCAGCTCCT
AACTTAAGCGATGAGGAGTTGGCGCTGCACCTTGAAGGTGACTTAAGCTTTGAGACCGCCTTTACCACGGCGCCTAACAG
CGCTCACCCAGAGCTAGATGGCCTAGGGCCAGTATTTAATAATGCCGATTGTAACTCTTGCCATCAGCGTGATGGTCGAA
ATTCGACCCCCATAGTTGCGAGCGGTGAAACGCGGATTAAGCTAGGGTCAGATGCGGGCATATTCTTAAGAATTAGTCTG
GCGCCTAATGAGCCGTGTGTAACAGGTACGGCCGCAAATGATTATTGCGCCCCTATTGCCGTGCCCGATTTTGGTGGGCA
GTTGTTTCACCGCGGCGTATTGCAGGCCCGCGATGATTGGCAGCAAAATCAGTTTATTGGTCAGGCTGATGTCTATCTAT
CTTATGAAACTAAGCAAGTTAGCTATAGCGATGGCAGCAGTGTTACTTTGAAAAAGCCTAAGTTTGAGGTGGAAAACCCA
TACGATGCGCCAGGTGAGACTATGGCGAGCAGTAATCTGACCTCTAATTTGCTGCAAGACGATGTACTCATGGGCTGGCG
TAATGGCATGCCAGTGTTTGGCTTAGGCTTGCTAGAGGCTATCTCAGAGGCGGATATTCTAGCCAATGTCGATGCGGTGG
ATAGTAATAACGACGGTATATCGGGCCGAGCTAACTATGTCTTCGATGCGATTAAAGCCAAAGCGGGTGATACTAACCCG
GTATCGCTCGGCCGTTTTGGCTGGAAGGCCAACACCCCAAGTGTGCGAGTGCAATCACTCGGGGCGTTACGCGGCGATAT
GGGGATCACTAACCCCTTATTTCCAGATGAAAGCATTGCCGGTACCGCGCTGCATGACTCCTACTTAGTGCGCACAGGCT
TTGTAGATACGGGAGCGGGGATCGATGGTGAACCAGAAGCCAGCGCCGAGTTCAGTGATTCAGTGGTGTTCTACGCCGAG
ACTTTAGCCGTCCCTGCTAGACGAAATGTCGATGATCTTGATGTGCGTGAAGGGGCAAGACTGTTCGAGCAGCTTAACTG
TACGGGTTGTCATACTCCAAGCTTTGTCACAAAGGCGTCGGGTGATGTTGGCGGCGTGGAGATGAGTGACAGTCATAAGA
GTCAAACCATCTATCCTTTCAGTGACATGCTGCTGCATGATATGGGAGAGGGGTTGGCAGATGGTCGTCCAGATTTCTTA
GCCGATGGAAACGAGTGGCGCACTCGTCCCTTATGGGGAATAGGCTTGACACAGACCGTTAATCCGCAAGCCGGATTCCT
GCACGATGGCCGCGCGGCGACCCTCGAAGAAGCTATCTTATGGCACGGTGGTGAAGCTGAAAAAAGTCAGCAAGATTTTA
TGGCGTTAACGGCAGAGGAACGCGCGCAAGTTATTGATTTCTTGATGTCCCTATAA

Upstream 100 bases:

>100_bases
TGAGGAGGCCTTAAGGCCTCCTTTTTATTTGGATAATTCCCTTGTTTTTTAGGTGGTTACTTCTAATGCTTTGCAAATAA
ACCGCTTAACAATACTGTGT

Downstream 100 bases:

>100_bases
TCACAAAATGCATAACTGAAACGCACTCAGTAAACGCAAAAACAGCGGGGCTACCTCTTTTGAGGAGTTTCGCTGTTGAT
TTTGTGAGGTAGGTAAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Thiol Oxidoreductase-Like Protein; Exported Protein; Signal Peptide

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MEQLMTTERNKKNSSLKGIALHGVLLGVVSLTACGGSGDEETPKPEEKIYPAYTDIKASGGDTTTFDASESGHGFSTPAP
NLSDEELALHLEGDLSFETAFTTAPNSAHPELDGLGPVFNNADCNSCHQRDGRNSTPIVASGETRIKLGSDAGIFLRISL
APNEPCVTGTAANDYCAPIAVPDFGGQLFHRGVLQARDDWQQNQFIGQADVYLSYETKQVSYSDGSSVTLKKPKFEVENP
YDAPGETMASSNLTSNLLQDDVLMGWRNGMPVFGLGLLEAISEADILANVDAVDSNNDGISGRANYVFDAIKAKAGDTNP
VSLGRFGWKANTPSVRVQSLGALRGDMGITNPLFPDESIAGTALHDSYLVRTGFVDTGAGIDGEPEASAEFSDSVVFYAE
TLAVPARRNVDDLDVREGARLFEQLNCTGCHTPSFVTKASGDVGGVEMSDSHKSQTIYPFSDMLLHDMGEGLADGRPDFL
ADGNEWRTRPLWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQQDFMALTAEERAQVIDFLMSL

Sequences:

>Translated_551_residues
MEQLMTTERNKKNSSLKGIALHGVLLGVVSLTACGGSGDEETPKPEEKIYPAYTDIKASGGDTTTFDASESGHGFSTPAP
NLSDEELALHLEGDLSFETAFTTAPNSAHPELDGLGPVFNNADCNSCHQRDGRNSTPIVASGETRIKLGSDAGIFLRISL
APNEPCVTGTAANDYCAPIAVPDFGGQLFHRGVLQARDDWQQNQFIGQADVYLSYETKQVSYSDGSSVTLKKPKFEVENP
YDAPGETMASSNLTSNLLQDDVLMGWRNGMPVFGLGLLEAISEADILANVDAVDSNNDGISGRANYVFDAIKAKAGDTNP
VSLGRFGWKANTPSVRVQSLGALRGDMGITNPLFPDESIAGTALHDSYLVRTGFVDTGAGIDGEPEASAEFSDSVVFYAE
TLAVPARRNVDDLDVREGARLFEQLNCTGCHTPSFVTKASGDVGGVEMSDSHKSQTIYPFSDMLLHDMGEGLADGRPDFL
ADGNEWRTRPLWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQQDFMALTAEERAQVIDFLMSL
>Mature_551_residues
MEQLMTTERNKKNSSLKGIALHGVLLGVVSLTACGGSGDEETPKPEEKIYPAYTDIKASGGDTTTFDASESGHGFSTPAP
NLSDEELALHLEGDLSFETAFTTAPNSAHPELDGLGPVFNNADCNSCHQRDGRNSTPIVASGETRIKLGSDAGIFLRISL
APNEPCVTGTAANDYCAPIAVPDFGGQLFHRGVLQARDDWQQNQFIGQADVYLSYETKQVSYSDGSSVTLKKPKFEVENP
YDAPGETMASSNLTSNLLQDDVLMGWRNGMPVFGLGLLEAISEADILANVDAVDSNNDGISGRANYVFDAIKAKAGDTNP
VSLGRFGWKANTPSVRVQSLGALRGDMGITNPLFPDESIAGTALHDSYLVRTGFVDTGAGIDGEPEASAEFSDSVVFYAE
TLAVPARRNVDDLDVREGARLFEQLNCTGCHTPSFVTKASGDVGGVEMSDSHKSQTIYPFSDMLLHDMGEGLADGRPDFL
ADGNEWRTRPLWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQQDFMALTAEERAQVIDFLMSL

Specific function: Unknown

COG id: COG3488

COG function: function code C; Predicted thiol oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58962; Mature: 58962

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLMTTERNKKNSSLKGIALHGVLLGVVSLTACGGSGDEETPKPEEKIYPAYTDIKASG
CCCHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEECCC
GDTTTFDASESGHGFSTPAPNLSDEELALHLEGDLSFETAFTTAPNSAHPELDGLGPVFN
CCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCC
NADCNSCHQRDGRNSTPIVASGETRIKLGSDAGIFLRISLAPNEPCVTGTAANDYCAPIA
CCCCCHHHHCCCCCCCCEEECCCCEEEECCCCCEEEEEEECCCCCCEECCCCCCCCCEEE
VPDFGGQLFHRGVLQARDDWQQNQFIGQADVYLSYETKQVSYSDGSSVTLKKPKFEVENP
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEEECCCCCEEEEECCCCCCCCC
YDAPGETMASSNLTSNLLQDDVLMGWRNGMPVFGLGLLEAISEADILANVDAVDSNNDGI
CCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHEEECCCCCCCCCCC
SGRANYVFDAIKAKAGDTNPVSLGRFGWKANTPSVRVQSLGALRGDMGITNPLFPDESIA
CCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCC
GTALHDSYLVRTGFVDTGAGIDGEPEASAEFSDSVVFYAETLAVPARRNVDDLDVREGAR
CCEECCCEEEEECCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
LFEQLNCTGCHTPSFVTKASGDVGGVEMSDSHKSQTIYPFSDMLLHDMGEGLADGRPDFL
HHHHCCCCCCCCCCCEEECCCCCCCEEECCCCCCCEECCHHHHHHHHHCCCCCCCCCCCC
ADGNEWRTRPLWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQQDFMALTAEE
CCCCCCCCCCEECCCCCEECCCCCCCEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RAQVIDFLMSL
HHHHHHHHHCC
>Mature Secondary Structure
MEQLMTTERNKKNSSLKGIALHGVLLGVVSLTACGGSGDEETPKPEEKIYPAYTDIKASG
CCCHHCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCEEEEECCC
GDTTTFDASESGHGFSTPAPNLSDEELALHLEGDLSFETAFTTAPNSAHPELDGLGPVFN
CCCEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCC
NADCNSCHQRDGRNSTPIVASGETRIKLGSDAGIFLRISLAPNEPCVTGTAANDYCAPIA
CCCCCHHHHCCCCCCCCEEECCCCEEEECCCCCEEEEEEECCCCCCEECCCCCCCCCEEE
VPDFGGQLFHRGVLQARDDWQQNQFIGQADVYLSYETKQVSYSDGSSVTLKKPKFEVENP
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECEEEECCCCCEEEEECCCCCCCCC
YDAPGETMASSNLTSNLLQDDVLMGWRNGMPVFGLGLLEAISEADILANVDAVDSNNDGI
CCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHEEECCCCCCCCCCC
SGRANYVFDAIKAKAGDTNPVSLGRFGWKANTPSVRVQSLGALRGDMGITNPLFPDESIA
CCCHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCC
GTALHDSYLVRTGFVDTGAGIDGEPEASAEFSDSVVFYAETLAVPARRNVDDLDVREGAR
CCEECCCEEEEECCEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHH
LFEQLNCTGCHTPSFVTKASGDVGGVEMSDSHKSQTIYPFSDMLLHDMGEGLADGRPDFL
HHHHCCCCCCCCCCCEEECCCCCCCEEECCCCCCCEECCHHHHHHHHHCCCCCCCCCCCC
ADGNEWRTRPLWGIGLTQTVNPQAGFLHDGRAATLEEAILWHGGEAEKSQQDFMALTAEE
CCCCCCCCCCEECCCCCEECCCCCCCEECCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
RAQVIDFLMSL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA