| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157960475
Identifier: 157960475
GI number: 157960475
Start: 801234
End: 802154
Strand: Direct
Name: 157960475
Synonym: Spea_0647
Alternate gene names: NA
Gene position: 801234-802154 (Clockwise)
Preceding gene: 157960474
Following gene: 157960476
Centisome position: 15.48
GC content: 49.95
Gene sequence:
>921_bases ATGATAAGCTCGCTCGCAGCGACTGCCGCTACTGCTATTTTGGCAACACATATGTCAGCGGCAGGCATGACTGCATTAGG CATGACAAGTGGCTTTTTATGGACCGATATCGGCCCTAAACAAGCCCTTGTTTGCGAGCGATATCAGCTTGAAGCTTGCG CTGCGCAGCTTCCTCCTTCTGCTCGAAATCAACTTCCGCATCGAATTAACCAATTAGAGTCTCTACTTGGTCAGCGCGGC GCTATGGTGTTGCCTTTACACCATGGCGATATTGCTGGTTTGGTGATAACAGACTTTGAACAGTTACCCAATCAGCAGAC CATTAACTGGGGCGTAGGCCACTTTACTTTGCCGCTTAAACAGCAGCCACAGCTAACCTATTGGCATGAACTCGGTCACC TGCATGCCATCGATGCCTTAAGCCGTCAGGGGCAAACTATCGACAGTGCATATCAGCATGAGTGGCTGGCGGATTTGTAT CTACACTGGCGCATTACCAAGCAGACTCAAAGCTTAGATTTAGCCTGGCAGCAATACCATAGACGCAACTTGGCGATGAT GGCGGACAGTGAGTTTATGTCTCATTGGTCGGTACCTGTATTGGCTCAGGCGTTTGAACTCTACTCTGTCGAGCAGTTAA GTCAGTTTGCCAGCTTTGATCTGTTCTGGCGGGATATTTCGCCAAAGCTGCGCTTGCATGATAGCGATACACTGGATGAG TTTTCCAGCTTGATACAACGCACGTTCGGCGCAGGAACGGTGCAGCCTTTGCCGGGCTATATGTATTGGCGTAAGCCTGC GCTGGGGCGCTATCTTAAGCCGACCTTGGTTGAGTTGATGGGGCTGGATGCGGCTCAAGACTGGCTTAACTCACAGCAGA TGACTAGTGAGATTGTTGAGAGGGAAAGAAGTCATTATTAA
Upstream 100 bases:
>100_bases GGCTTTGAAGATGGCATCTCAACCACGGCCATTATCCAAAACATCATGGCTAACCAGTAGCCATTGATGATTAGTCGCTA GTGATTGACTATAAAGCACA
Downstream 100 bases:
>100_bases TATCCGTGTTTTTCTAGGTTTGTTGTATTGAATCGCAGACTGATATCGGTGGCAGAGTTGAGCCGATGATTTACTGAATG AGAGCTGAACAAAACTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MISSLAATAATAILATHMSAAGMTALGMTSGFLWTDIGPKQALVCERYQLEACAAQLPPSARNQLPHRINQLESLLGQRG AMVLPLHHGDIAGLVITDFEQLPNQQTINWGVGHFTLPLKQQPQLTYWHELGHLHAIDALSRQGQTIDSAYQHEWLADLY LHWRITKQTQSLDLAWQQYHRRNLAMMADSEFMSHWSVPVLAQAFELYSVEQLSQFASFDLFWRDISPKLRLHDSDTLDE FSSLIQRTFGAGTVQPLPGYMYWRKPALGRYLKPTLVELMGLDAAQDWLNSQQMTSEIVERERSHY
Sequences:
>Translated_306_residues MISSLAATAATAILATHMSAAGMTALGMTSGFLWTDIGPKQALVCERYQLEACAAQLPPSARNQLPHRINQLESLLGQRG AMVLPLHHGDIAGLVITDFEQLPNQQTINWGVGHFTLPLKQQPQLTYWHELGHLHAIDALSRQGQTIDSAYQHEWLADLY LHWRITKQTQSLDLAWQQYHRRNLAMMADSEFMSHWSVPVLAQAFELYSVEQLSQFASFDLFWRDISPKLRLHDSDTLDE FSSLIQRTFGAGTVQPLPGYMYWRKPALGRYLKPTLVELMGLDAAQDWLNSQQMTSEIVERERSHY >Mature_306_residues MISSLAATAATAILATHMSAAGMTALGMTSGFLWTDIGPKQALVCERYQLEACAAQLPPSARNQLPHRINQLESLLGQRG AMVLPLHHGDIAGLVITDFEQLPNQQTINWGVGHFTLPLKQQPQLTYWHELGHLHAIDALSRQGQTIDSAYQHEWLADLY LHWRITKQTQSLDLAWQQYHRRNLAMMADSEFMSHWSVPVLAQAFELYSVEQLSQFASFDLFWRDISPKLRLHDSDTLDE FSSLIQRTFGAGTVQPLPGYMYWRKPALGRYLKPTLVELMGLDAAQDWLNSQQMTSEIVERERSHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34756; Mature: 34756
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSLAATAATAILATHMSAAGMTALGMTSGFLWTDIGPKQALVCERYQLEACAAQLPPS CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCH ARNQLPHRINQLESLLGQRGAMVLPLHHGDIAGLVITDFEQLPNQQTINWGVGHFTLPLK HHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEHEEHHHHHCCCCCEEEECCCEEEECCC QQPQLTYWHELGHLHAIDALSRQGQTIDSAYQHEWLADLYLHWRITKQTQSLDLAWQQYH CCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHH RRNLAMMADSEFMSHWSVPVLAQAFELYSVEQLSQFASFDLFWRDISPKLRLHDSDTLDE HCCHHHEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCHHH FSSLIQRTFGAGTVQPLPGYMYWRKPALGRYLKPTLVELMGLDAAQDWLNSQQMTSEIVE HHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RERSHY HHHCCC >Mature Secondary Structure MISSLAATAATAILATHMSAAGMTALGMTSGFLWTDIGPKQALVCERYQLEACAAQLPPS CCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCH ARNQLPHRINQLESLLGQRGAMVLPLHHGDIAGLVITDFEQLPNQQTINWGVGHFTLPLK HHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEHEEHHHHHCCCCCEEEECCCEEEECCC QQPQLTYWHELGHLHAIDALSRQGQTIDSAYQHEWLADLYLHWRITKQTQSLDLAWQQYH CCCCCHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHH RRNLAMMADSEFMSHWSVPVLAQAFELYSVEQLSQFASFDLFWRDISPKLRLHDSDTLDE HCCHHHEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCCCHHH FSSLIQRTFGAGTVQPLPGYMYWRKPALGRYLKPTLVELMGLDAAQDWLNSQQMTSEIVE HHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RERSHY HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA