| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is hldE [H]
Identifier: 157960474
GI number: 157960474
Start: 799745
End: 801193
Strand: Direct
Name: hldE [H]
Synonym: Spea_0646
Alternate gene names: 157960474
Gene position: 799745-801193 (Clockwise)
Preceding gene: 157960472
Following gene: 157960475
Centisome position: 15.46
GC content: 51.48
Gene sequence:
>1449_bases GTGATAGATATAGGCGTTATGAAGATTTCTCTGCCAGCATTTGAAAAAGCCAAGGTTCTCGTTGTCGGTGACGTGATGTT AGATCGCTATTGGGCAGGGCCTACAGCGCGGATCTCACCTGAAGCGCCTGTACCCGTTGTTAAAGTTGAGCAACTTGAAG ACAGACCCGGCGGCGCAGCGAACGTGGCGATCAATATCGCGACCTTAGGTGGCAGCGCAAGCCTTGCTGGCATCGTTGGT GTAGATGAAACCGCCGATGCATTAACTGTGGGGGTGCGTGCCTTAGGTGTTGAGCCTAACTGGCACAAGGTGGCCGATAA GCCAACCATCACTAAGTTACGCGTCATGTCTCGCAATCAACAGTTATTAAGACTCGACTTTGAAGAGAGCTACTCTCAAG CAGAGAGCGATGCGCTGTTAGCACAAAGTTTATCTGAGCTAGATAAGGTCGATGTGGCGGTGTTGTCTGACTATGCCAAG GGCGCCTTGATTTCACCACAAAGCTTTATTGAAGCGGCTAACGCTAAAGGCGTTAAAGTGCTGGTGGATCCTAAGGGGAG CGATTTTTCAAAGTATCGCGGCGCGTACCTGCTAACGCCAAATATGAGTGAGTTTGAGGTCGTGGTCGGTAAAGTGGAAT CCGAAGCCGATTTAGTGGCTAAGGCGCAAGGTCTGTTACAAGCCTTCGATCTAACCGCCATGCTAGTGACTCGCTCTGAA AAGGGCATGACGCTAATCACTAAAGATCAACCTGAGCTGCACATTCCTACCGTTGCTCGCGAAGTCTACGATGTTACTGG CGCCGGTGACACGGTTATTTCTGCGCTGGCTACGGCAATCGCTGCTGGTAGCGACTTGCCACAGGCTTGTGCGATTGCCA ATACGGCTGCGGGCATTGTGGTGGCTAAGCTTGGCACATCGACAGTGACACGTCTTGAGCTGATTGAAGCGCTATCTCTA AGCCATGGTGAGTCAGGTTTTGGCGCGGTCAGTGAAGATCAATTGGCTTATGCCCTTGAGCAGGCAAAGCTACGGGGTGA ACGTGTGGTGATGACCAATGGCTGCTTTGATATCTTGCATGCTGGGCATGTGAGTTACCTGCAGCAGGCTCGCGCTTTAG GCGATCGGTTAATTGTGGCGGTTAATACAGACGCTTCGGTTAAGCGCCTGAAAGGTGAAGGTCGCCCGGTTAACAGCGAA GATAGACGTATGACGGTATTGGCAGCGCTTGCATCTGTCGATTGGGTGGTACCGTTTAGCGAGGATACGCCGCAGCGCAT CATCTCGCGCCTACTGCCAGATTTGTTGGTGAAAGGTGGCGATTATAAGGTGGAAGATATCGCTGGTGGCAGTGAGGTAA TGGCAGCTGGTGGTCAGGTTAAAGTCTTAGGCTTTGAAGATGGCATCTCAACCACGGCCATTATCCAAAACATCATGGCT AACCAGTAG
Upstream 100 bases:
>100_bases TTGAGCTTTTTCTACCACGTAATTCTCGGATCCATTGAAAAATTACTCATTATTCTAACTCAAAAGTGATTAAAATTAGG TACAATCAGGATTAAATTTT
Downstream 100 bases:
>100_bases CCATTGATGATTAGTCGCTAGTGATTGACTATAAAGCACAATGATAAGCTCGCTCGCAGCGACTGCCGCTACTGCTATTT TGGCAACACATATGTCAGCG
Product: bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MIDIGVMKISLPAFEKAKVLVVGDVMLDRYWAGPTARISPEAPVPVVKVEQLEDRPGGAANVAINIATLGGSASLAGIVG VDETADALTVGVRALGVEPNWHKVADKPTITKLRVMSRNQQLLRLDFEESYSQAESDALLAQSLSELDKVDVAVLSDYAK GALISPQSFIEAANAKGVKVLVDPKGSDFSKYRGAYLLTPNMSEFEVVVGKVESEADLVAKAQGLLQAFDLTAMLVTRSE KGMTLITKDQPELHIPTVAREVYDVTGAGDTVISALATAIAAGSDLPQACAIANTAAGIVVAKLGTSTVTRLELIEALSL SHGESGFGAVSEDQLAYALEQAKLRGERVVMTNGCFDILHAGHVSYLQQARALGDRLIVAVNTDASVKRLKGEGRPVNSE DRRMTVLAALASVDWVVPFSEDTPQRIISRLLPDLLVKGGDYKVEDIAGGSEVMAAGGQVKVLGFEDGISTTAIIQNIMA NQ
Sequences:
>Translated_482_residues MIDIGVMKISLPAFEKAKVLVVGDVMLDRYWAGPTARISPEAPVPVVKVEQLEDRPGGAANVAINIATLGGSASLAGIVG VDETADALTVGVRALGVEPNWHKVADKPTITKLRVMSRNQQLLRLDFEESYSQAESDALLAQSLSELDKVDVAVLSDYAK GALISPQSFIEAANAKGVKVLVDPKGSDFSKYRGAYLLTPNMSEFEVVVGKVESEADLVAKAQGLLQAFDLTAMLVTRSE KGMTLITKDQPELHIPTVAREVYDVTGAGDTVISALATAIAAGSDLPQACAIANTAAGIVVAKLGTSTVTRLELIEALSL SHGESGFGAVSEDQLAYALEQAKLRGERVVMTNGCFDILHAGHVSYLQQARALGDRLIVAVNTDASVKRLKGEGRPVNSE DRRMTVLAALASVDWVVPFSEDTPQRIISRLLPDLLVKGGDYKVEDIAGGSEVMAAGGQVKVLGFEDGISTTAIIQNIMA NQ >Mature_482_residues MIDIGVMKISLPAFEKAKVLVVGDVMLDRYWAGPTARISPEAPVPVVKVEQLEDRPGGAANVAINIATLGGSASLAGIVG VDETADALTVGVRALGVEPNWHKVADKPTITKLRVMSRNQQLLRLDFEESYSQAESDALLAQSLSELDKVDVAVLSDYAK GALISPQSFIEAANAKGVKVLVDPKGSDFSKYRGAYLLTPNMSEFEVVVGKVESEADLVAKAQGLLQAFDLTAMLVTRSE KGMTLITKDQPELHIPTVAREVYDVTGAGDTVISALATAIAAGSDLPQACAIANTAAGIVVAKLGTSTVTRLELIEALSL SHGESGFGAVSEDQLAYALEQAKLRGERVVMTNGCFDILHAGHVSYLQQARALGDRLIVAVNTDASVKRLKGEGRPVNSE DRRMTVLAALASVDWVVPFSEDTPQRIISRLLPDLLVKGGDYKVEDIAGGSEVMAAGGQVKVLGFEDGISTTAIIQNIMA NQ
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI296841136, Length=132, Percent_Identity=32.5757575757576, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI4505651, Length=132, Percent_Identity=32.5757575757576, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1789432, Length=476, Percent_Identity=59.8739495798319, Blast_Score=573, Evalue=1e-164,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.-
Molecular weight: Translated: 50947; Mature: 50947
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDIGVMKISLPAFEKAKVLVVGDVMLDRYWAGPTARISPEAPVPVVKVEQLEDRPGGAA CCEEEEEEEECCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEHHCCCCCCCE NVAINIATLGGSASLAGIVGVDETADALTVGVRALGVEPNWHKVADKPTITKLRVMSRNQ EEEEEEEEECCCCCEEEEECCCCCHHHHHHHHEEECCCCCCHHCCCCCCHHEEEECCCCC QLLRLDFEESYSQAESDALLAQSLSELDKVDVAVLSDYAKGALISPQSFIEAANAKGVKV EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHCCCCCEEE LVDPKGSDFSKYRGAYLLTPNMSEFEVVVGKVESEADLVAKAQGLLQAFDLTAMLVTRSE EECCCCCCHHHHCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEECC KGMTLITKDQPELHIPTVAREVYDVTGAGDTVISALATAIAAGSDLPQACAIANTAAGIV CCCEEEECCCCCEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEE VAKLGTSTVTRLELIEALSLSHGESGFGAVSEDQLAYALEQAKLRGERVVMTNGCFDILH EEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHH AGHVSYLQQARALGDRLIVAVNTDASVKRLKGEGRPVNSEDRRMTVLAALASVDWVVPFS HHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEECC EDTPQRIISRLLPDLLVKGGDYKVEDIAGGSEVMAAGGQVKVLGFEDGISTTAIIQNIMA CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHEECCCEEEEEEECCCCHHHHHHHHHHC NQ CC >Mature Secondary Structure MIDIGVMKISLPAFEKAKVLVVGDVMLDRYWAGPTARISPEAPVPVVKVEQLEDRPGGAA CCEEEEEEEECCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEHHCCCCCCCE NVAINIATLGGSASLAGIVGVDETADALTVGVRALGVEPNWHKVADKPTITKLRVMSRNQ EEEEEEEEECCCCCEEEEECCCCCHHHHHHHHEEECCCCCCHHCCCCCCHHEEEECCCCC QLLRLDFEESYSQAESDALLAQSLSELDKVDVAVLSDYAKGALISPQSFIEAANAKGVKV EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHCCCCCEEE LVDPKGSDFSKYRGAYLLTPNMSEFEVVVGKVESEADLVAKAQGLLQAFDLTAMLVTRSE EECCCCCCHHHHCCEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEEECC KGMTLITKDQPELHIPTVAREVYDVTGAGDTVISALATAIAAGSDLPQACAIANTAAGIV CCCEEEECCCCCEECCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEE VAKLGTSTVTRLELIEALSLSHGESGFGAVSEDQLAYALEQAKLRGERVVMTNGCFDILH EEECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHH AGHVSYLQQARALGDRLIVAVNTDASVKRLKGEGRPVNSEDRRMTVLAALASVDWVVPFS HHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEECC EDTPQRIISRLLPDLLVKGGDYKVEDIAGGSEVMAAGGQVKVLGFEDGISTTAIIQNIMA CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHEECCCEEEEEEECCCCHHHHHHHHHHC NQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA